Homologs of PS417_01625 from Pseudomonas simiae WCS417

rRNA methylase
SEED: tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)
KEGG: RNA methyltransferase, TrmH family, group 2

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_01625 rRNA methylase no data 100 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00545 'tRNA (cytidine(34)-2'-O)-methyltransferase' transl_table=11 insig. 98 100
o Pseudomonas fluorescens SBW25 PFLU_RS01675 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 98 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS01675 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 98 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1613 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) insig. 95 100
o Pseudomonas fluorescens FW300-N2E3 AO353_12135 rRNA methylase sig. 93 100
o Pseudomonas fluorescens FW300-N2C3 AO356_09750 rRNA methylase insig. 93 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_349 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) insig. 92 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3828 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) strong 91 99
o Pseudomonas sp. DMC3 GFF4085 tRNA (cytidine(34)-2'-O)-methyltransferase cofit 89 100
o Pseudomonas sp. RS175 PFR28_04942 'tRNA (cytidine(34)-2'-O)-methyltransferase' transl_table=11 insig. 91 99
o Pseudomonas syringae pv. syringae B728a Psyr_4881 RNA methyltransferase TrmH, group 2 insig. 86 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4881 RNA methyltransferase TrmH, group 2 insig. 86 99
o Pseudomonas sp. SVBP6 COO64_RS13315 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 85 99
o Pseudomonas putida KT2440 PP_5052 tRNA(Leu) mC34,mU34 2'-O-ribose methyltransferase, AdoMet-dependent sig. 85 99
o Pseudomonas sp. BP01 JOY50_RS09440 trmL tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL insig. 83 99
o Pseudomonas segetis P6 MPMX49_04290 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 81 99
o Pseudomonas aeruginosa PA14 IKLFDK_27870 tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL insig. 80 99
o Pseudomonas stutzeri RCH2 Psest_3934 rRNA methylase, putative, group 2 insig. 79 99
o Pseudomonas sp. S08-1 OH686_14675 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 72 99
o Rhodanobacter sp. FW510-T8 OKGIIK_13255 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 71 99
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10645 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL insig. 70 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13445 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 71 99
o Rhodanobacter denitrificans MT42 LRK55_RS10285 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 69 99
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS03415 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 69 99
o Lysobacter sp. OAE881 ABIE51_RS00285 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 65 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.277.1 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) insig. 67 99
o Serratia liquefaciens MT49 IAI46_24670 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL insig. 63 99
o Rahnella sp. WP5 EX31_RS14330 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL insig. 63 99
o Klebsiella michiganensis M5al BWI76_RS27200 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL sig. 62 99
o Klebsiella pneumoniae MKP103 KDGMDA_07885 tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL insig. 61 99
o Burkholderia phytofirmans PsJN BPHYT_RS02620 tRNA methyltransferase insig. 64 100
o Paraburkholderia graminis OAS925 ABIE53_000669 tRNA (cytidine/uridine-2'-O-)-methyltransferase sig. 64 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS01475 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL insig. 63 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF408 'tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)' transl_table=11 cofit 60 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01998 tRNA (cytidine/uridine-2'-O-)-methyltransferase insig. 64 99
o Variovorax sp. SCN45 GFF2293 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) insig. 64 99
o Pantoea sp. MT58 IAI47_00750 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL insig. 61 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18595 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL cofit 61 99
o Enterobacter asburiae PDN3 EX28DRAFT_3857 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 60 99
o Enterobacter sp. TBS_079 MPMX20_00127 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 60 99
o Escherichia fergusonii Becca EFB2_00204 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 59 99
o Escherichia coli BL21 ECD_03464 tRNA Leu mC34,mU34 2'-O-methyltransferase, SAM-dependent insig. 59 99
o Escherichia coli ECOR38 HEPCGN_14605 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL insig. 59 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00093 'tRNA (cytidine(34)-2'-O)-methyltransferase' transl_table=11 insig. 59 99
o Escherichia coli Nissle 1917 ECOLIN_RS20585 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL insig. 59 99
o Escherichia coli BW25113 b3606 yibK predicted rRNA methylase (NCBI) insig. 59 99
o Shewanella amazonensis SB2B Sama_3440 RNA methyltransferase TrmH, group 2 (RefSeq) insig. 59 99
o Variovorax sp. OAS795 ABID97_RS23985 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL insig. 63 99
o Escherichia coli ECOR27 NOLOHH_07645 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL insig. 59 99
o Escherichia coli ECRC100 OKFHMN_15765 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL insig. 59 99
o Escherichia coli ECRC101 MCAODC_06275 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL insig. 59 99
o Escherichia coli ECRC102 NIAGMN_13525 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL insig. 59 99
o Escherichia coli ECRC62 BNILDI_03870 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL insig. 59 99
o Escherichia coli ECRC98 JDDGAC_19390 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL insig. 59 99
o Escherichia coli ECRC99 KEDOAH_12385 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine (34)-2'-O)-methyltransferase TrmL no data 59 99
o Erwinia amylovora T8 OLJFJH_05925 tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL insig. 61 99
o Alteromonas macleodii MIT1002 MIT1002_00480 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 60 100
o Methylophilus sp. DMC18 GFF1665 tRNA (cytidine(34)-2'-O)-methyltransferase cofit 59 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF684 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) no data 63 99
o Shewanella sp. ANA-3 Shewana3_3934 RNA methyltransferase (RefSeq) insig. 57 100
o Shewanella oneidensis MR-1 SO4529 RNA methyltransferase, TrmH family, group 2 (NCBI ptt file) insig. 56 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS10925 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL no data 61 100
o Ralstonia solanacearum UW163 UW163_RS02655 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL no data 61 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_07930 trmL tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL cofit 58 99
o Erwinia tracheiphila SCR3 LU632_RS21865 trmL tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL insig. 58 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS06775 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL insig. 61 99
o Ralstonia solanacearum PSI07 RPSI07_RS22385 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL insig. 60 100
o Herbaspirillum seropedicae SmR1 HSERO_RS20815 tRNA methyltransferase insig. 57 100
o Ralstonia solanacearum GMI1000 RS_RS01765 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL insig. 61 99
o Cupriavidus basilensis FW507-4G11 RR42_RS01855 rRNA methylase insig. 60 99
o Dechlorosoma suillum PS Dsui_1278 putative rRNA methylase SpoU family cofit 59 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_13605 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL cofit 58 99
o Acidovorax sp. GW101-3H11 Ac3H11_3896 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) insig. 59 99
o Kangiella aquimarina DSM 16071 B158DRAFT_0713 rRNA methylase, putative, group 2 insig. 57 100
o Castellaniella sp019104865 MT123 ABCV34_RS14245 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 59 99
o Dickeya dadantii 3937 DDA3937_RS00755 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 54 99
o Dickeya dianthicola 67-19 HGI48_RS20615 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 54 99
o Dickeya dianthicola ME23 DZA65_RS21630 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 54 99
o Shewanella loihica PV-4 Shew_3577 RNA methyltransferase (RefSeq) insig. 56 100
o Pectobacterium carotovorum WPP14 HER17_RS00645 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 53 99
o Acinetobacter baumannii LAC-4 RR41_RS03955 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 55 100
o Acinetobacter radioresistens SK82 MPMX26_00707 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 52 100
o Mycobacterium tuberculosis H37Rv Rv3366 Probable tRNA/rRNA methylase SpoU (tRNA/rRNA methyltransferase) insig. 52 99
  Bifidobacterium breve UCC2003 BBR_RS12930 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 44 99
o Desulfovibrio vulgaris Miyazaki F DvMF_0834 tRNA/rRNA methyltransferase (SpoU) (RefSeq) strong 47 98
o Fusobacterium nucleatum SB010 HUW76_06985 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL cofit 46 99
o Synechococcus elongatus PCC 7942 Synpcc7942_1874 RNA methyltransferase TrmH, group 2 insig. 48 99
o Desulfovibrio vulgaris Hildenborough JW710 DVU2238 RNA methyltransferase, TrmH family (TIGR) insig. 46 95
o Cellulophaga baltica 18 M666_RS08510 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 40 99
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3218 Predicted rRNA methylase (SpoU class) insig. 44 97
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02555 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 45 98
o Caulobacter crescentus NA1000 CCNA_00504 23S rRNA methyltransferase insig. 47 97
o Caulobacter crescentus NA1000 Δfur CCNA_00504 23S rRNA methyltransferase cofit 47 97
  Azospirillum sp. SherDot2 MPMX19_05011 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 43 97
o Synechocystis sp000284455 PCC 6803 SGL_RS12495 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL sig. 41 98
o Rhodospirillum rubrum S1H Rru_A0365 tRNA/rRNA methyltransferase (SpoU) (NCBI) insig. 43 97
o Azospirillum brasilense Sp245 AZOBR_RS20740 tRNA methyltransferase insig. 40 97
o Agrobacterium fabrum C58 Atu2244 tRNA/rRNA methyltransferase insig. 38 99
o Rhizobium sp. OAE497 ABIE40_RS13160 tRNA (cytidine(34)-2'-O)-methyltransferase insig. 41 97