Homologs of PS417_12115 from Pseudomonas simiae WCS417

endoribonuclease L-PSP
SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03373 2-iminobutanoate/2-iminopropanoate deaminase cofit 100 100
  Pseudomonas simiae WCS417 PS417_12115 endoribonuclease L-PSP no data 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS12805 RidA family protein sig. 99 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS12805 RidA family protein sig. 99 100
o Pseudomonas orientalis W4I3 QF045_RS14095 RidA family protein cofit 98 100
o Pseudomonas syringae pv. syringae B728a Psyr_2507 Endoribonuclease L-PSP sig. 90 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2507 Endoribonuclease L-PSP insig. 90 99
o Pseudomonas fluorescens FW300-N2E3 AO353_21730 reactive intermediate/imine deaminase no data 91 99
o Pseudomonas fluorescens FW300-N2C3 AO356_00460 reactive intermediate/imine deaminase no data 90 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2865 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 88 99
o Pseudomonas sp. RS175 PFR28_01387 2-iminobutanoate/2-iminopropanoate deaminase insig. 87 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5641 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 88 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2049 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 87 99
o Pseudomonas sp. DMC3 GFF3667 2-iminobutanoate/2-iminopropanoate deaminase no data 86 99
o Rhizobium sp. OAE497 ABIE40_RS21405 RidA family protein insig. 72 99
o Sinorhizobium meliloti 1021 SM_b21139 translation initiation inhibitors insig. 66 99
  Sinorhizobium meliloti 1021 SM_b21157 translation initiation inhibitor protein insig. 66 99
o Cupriavidus basilensis FW507-4G11 RR42_RS28840 hypothetical protein insig. 67 87
o Paraburkholderia sabiae LMG 24235 QEN71_RS01965 RidA family protein insig. 68 87
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS12635 RidA family protein insig. 68 87
o Ralstonia sp. UNC404CL21Col ABZR87_RS19100 RidA family protein strong 65 98
o Burkholderia phytofirmans PsJN BPHYT_RS03130 hypothetical protein insig. 67 87
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01890 reactive intermediate/imine deaminase insig. 67 87
o Paraburkholderia graminis OAS925 ABIE53_000758 reactive intermediate/imine deaminase strong 66 87
o Ralstonia solanacearum PSI07 RPSI07_RS05465 RidA family protein insig. 64 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS18170 RidA family protein no data 64 98
o Ralstonia solanacearum UW163 UW163_RS20960 RidA family protein no data 64 98
o Ralstonia solanacearum GMI1000 RS_RS22865 RidA family protein no data 63 98
o Herbaspirillum seropedicae SmR1 HSERO_RS08735 hypothetical protein insig. 62 98
o Agrobacterium fabrum C58 Atu3926 translation initiation inhibitor insig. 56 96
o Klebsiella michiganensis M5al BWI76_RS03895 reactive intermediate/imine deaminase insig. 59 98
  Agrobacterium fabrum C58 Atu5232 translation initiation inhibitor no data 52 96
o Serratia liquefaciens MT49 IAI46_02310 RidA family protein insig. 55 98
o Klebsiella pneumoniae MKP103 KDGMDA_12165 reactive intermediate/imine deaminase insig. 57 98
o Variovorax sp. OAS795 ABID97_RS22895 RidA family protein insig. 51 99
o Variovorax sp. SCN45 GFF6707 RidA/YER057c/UK114 superfamily protein insig. 48 100
o Acidovorax sp. GW101-3H11 Ac3H11_699 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein insig. 45 100
  Ralstonia solanacearum GMI1000 RS_RS23530 RidA family protein no data 46 98
  Ralstonia solanacearum GMI1000 RS_RS23660 RidA family protein no data 46 98
  Cupriavidus basilensis FW507-4G11 RR42_RS34135 hypothetical protein insig. 45 98
  Fusobacterium nucleatum SB010 HUW76_10065 RidA family protein strong 45 84
  Cellulophaga baltica 18 M666_RS12150 RidA family protein insig. 42 82
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1327 endoribonuclease L-PSP, putative sig. 39 84
  Synechocystis sp000284455 PCC 6803 SGL_RS16325 RidA family protein strong 41 82
  Synechococcus elongatus PCC 7942 Synpcc7942_0972 YjgF-like protein strong 45 82
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22825 reactive intermediate/imine deaminase strong 42 82
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_14050 ridA 2-iminobutanoate/2-iminopropanoate deaminase no data 38 84
  Erwinia tracheiphila SCR3 LU632_RS20960 ridA 2-iminobutanoate/2-iminopropanoate deaminase sig. 38 84
  Bacteroides stercoris CC31F HMPREF1181_RS10885 RidA family protein strong 40 84
o Pseudomonas putida KT2440 PP_2247 putative Endoribonuclease insig. 39 84
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4943 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 38 90
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17590 RidA family protein sig. 36 84
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS20925 endoribonuclease L-PSP strong 41 84
  Ralstonia solanacearum UW163 UW163_RS22060 endoribonuclease L-PSP insig. 41 84
  Bacteroides thetaiotaomicron VPI-5482 BT1336 putative translation initiation inhibitor (NCBI ptt file) strong 39 84
o Pseudomonas sp. BP01 JOY50_RS25415 RidA family protein insig. 38 84
  Pectobacterium carotovorum WPP14 HER17_RS19520 2-iminobutanoate/2-iminopropanoate deaminase sig. 34 84
  Erwinia amylovora T8 OLJFJH_07320 2-iminobutanoate/2-iminopropanoate deaminase strong 35 84
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11845 RidA family protein strong 37 81
  Bacteroides ovatus ATCC 8483 BACOVA_00589 putative endoribonuclease L-PSP cofit 38 84
o Pseudomonas sp. SVBP6 COO64_RS09615 RidA family protein insig. 36 84
  Methylophilus sp. DMC18 GFF1301 2-iminobutanoate/2-iminopropanoate deaminase cofit 41 81
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS02020 RidA family protein insig. 40 84
  Paraburkholderia graminis OAS925 ABIE53_004706 2-iminobutanoate/2-iminopropanoate deaminase sig. 35 84
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18400 RidA family protein strong 35 84
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03549 reactive intermediate/imine deaminase insig. 35 84
  Rahnella sp. WP5 EX31_RS12775 2-iminobutanoate/2-iminopropanoate deaminase insig. 35 84
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF928 Endoribonuclease L-PSP strong 36 84
  Paraburkholderia sabiae LMG 24235 QEN71_RS09865 RidA family protein insig. 35 84
o Pseudomonas aeruginosa MRSN321 DY961_RS01310 RidA family protein sig. 37 88
o Pseudomonas aeruginosa PA14 IKLFDK_15890 enamine deaminase RidA insig. 37 88
o Pseudomonas aeruginosa PUPa3 DQ20_RS34245 RidA family protein insig. 37 88
  Klebsiella pneumoniae MKP103 KDGMDA_11455 2-iminobutanoate/2-iminopropanoate deaminase insig. 36 84
  Phocaeicola dorei CL03T12C01 ABI39_RS14715 RidA family protein strong 35 84
  Pantoea sp. MT58 IAI47_16870 2-iminobutanoate/2-iminopropanoate deaminase strong 35 84
  Desulfovibrio vulgaris Hildenborough JW710 DVU0620 endoribonuclease, L-PSP family (TIGR) insig. 40 75
  Vibrio cholerae E7946 ATCC 55056 CSW01_12735 RidA family protein cofit 35 84
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS08965 2-iminobutanoate/2-iminopropanoate deaminase strong 34 84
  Enterobacter asburiae PDN3 EX28DRAFT_3444 reactive intermediate/imine deaminase insig. 33 84
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01145 Putative aminoacrylate peracid reductase RutC cofit 35 82
  Dickeya dadantii 3937 DDA3937_RS01915 2-iminobutanoate/2-iminopropanoate deaminase insig. 34 84
  Klebsiella michiganensis M5al BWI76_RS02985 reactive intermediate/imine deaminase strong 36 84
  Escherichia coli BL21 ECD_04111 enamine/imine deaminase, reaction intermediate detoxification strong 34 84
  Escherichia fergusonii Becca EFB2_04290 2-iminobutanoate/2-iminopropanoate deaminase sig. 34 84
  Escherichia coli ECOR27 NOLOHH_04135 ridA 2-iminobutanoate/2-iminopropanoate deaminase insig. 34 84
  Escherichia coli ECOR38 HEPCGN_10070 ridA 2-iminobutanoate/2-iminopropanoate deaminase insig. 34 84
  Escherichia coli ECRC100 OKFHMN_11875 ridA 2-iminobutanoate/2-iminopropanoate deaminase cofit 34 84
  Escherichia coli ECRC101 MCAODC_02380 ridA 2-iminobutanoate/2-iminopropanoate deaminase strong 34 84
  Escherichia coli ECRC102 NIAGMN_09725 ridA 2-iminobutanoate/2-iminopropanoate deaminase strong 34 84
  Escherichia coli ECRC62 BNILDI_07375 ridA 2-iminobutanoate/2-iminopropanoate deaminase cofit 34 84
  Escherichia coli ECRC98 JDDGAC_15515 ridA 2-iminobutanoate/2-iminopropanoate deaminase cofit 34 84
  Escherichia coli ECRC99 KEDOAH_16280 ridA 2-iminobutanoate/2-iminopropanoate deaminase no data 34 84
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03791 2-iminobutanoate/2-iminopropanoate deaminase insig. 34 84
  Escherichia coli Nissle 1917 ECOLIN_RS24615 2-iminobutanoate/2-iminopropanoate deaminase insig. 34 84
  Escherichia coli BW25113 b4243 yjgF orf, hypothetical protein (VIMSS) strong 34 84
  Enterobacter sp. TBS_079 MPMX20_00542 2-iminobutanoate/2-iminopropanoate deaminase sig. 34 84
  Dickeya dianthicola ME23 DZA65_RS01960 2-iminobutanoate/2-iminopropanoate deaminase insig. 35 84
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17245 RidA family protein no data 39 82
  Rhodanobacter sp. FW510-T8 OKGIIK_12095 ridA reactive intermediate/imine deaminase strong 36 81
  Cupriavidus basilensis FW507-4G11 RR42_RS16710 endoribonuclease L-PSP insig. 35 82