Homologs of GFF2116 from Sphingobium sp. HT1-2

NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
SEED: NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3)
KEGG: NADH dehydrogenase I subunit D

172 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF2116 NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) no data 100 100
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0709 NADH dehydrogenase subunit D (EC 1.6.5.3) no data 85 100
o Azospirillum sp. SherDot2 MPMX19_01743 NADH-quinone oxidoreductase subunit D no data 69 95
o Azospirillum brasilense Sp245 AZOBR_RS07180 NADH dehydrogenase no data 68 93
o Xanthobacter sp. DMC5 GFF1247 NADH-quinone oxidoreductase subunit D no data 67 95
o Agrobacterium fabrum C58 Atu1272 NADH ubiquinone oxidoreductase chain D no data 65 94
o Rhodopseudomonas palustris CGA009 TX73_015280 NADH-quinone oxidoreductase subunit D no data 66 94
o Rhizobium sp. OAE497 ABIE40_RS07190 NADH-quinone oxidoreductase subunit D no data 66 94
o Sinorhizobium meliloti 1021 SMc01915 NADH dehydrogenase subunit D no data 65 94
  Rhizobium sp. OAE497 ABIE40_RS30730 NADH-quinone oxidoreductase subunit D cofit 65 95
o Magnetospirillum magneticum AMB-1 AMB_RS13995 NADH-quinone oxidoreductase subunit D no data 64 95
o Rhodospirillum rubrum S1H Rru_A1558 NADH dehydrogenase I, D subunit (NCBI) no data 64 95
o Phaeobacter inhibens DSM 17395 PGA1_c10400 NADH-quinone oxidoreductase subunit D no data 63 96
o Caulobacter crescentus NA1000 CCNA_02029 NADH-quinone oxidoreductase chain D no data 62 96
o Caulobacter crescentus NA1000 Δfur CCNA_02029 NADH-quinone oxidoreductase chain D no data 62 96
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS06405 NADH-quinone oxidoreductase subunit D no data 63 95
o Dinoroseobacter shibae DFL-12 Dshi_1311 NADH dehydrogenase I, D subunit (RefSeq) no data 60 97
o Methylophilus sp. DMC18 GFF943 NADH-quinone oxidoreductase subunit D no data 57 95
o Herbaspirillum seropedicae SmR1 HSERO_RS08835 NADH dehydrogenase subunit D no data 57 95
o Variovorax sp. SCN45 GFF4753 NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) no data 57 95
o Acidovorax sp. GW101-3H11 Ac3H11_1449 NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) no data 58 95
o Ralstonia solanacearum PSI07 RPSI07_RS14350 NADH-quinone oxidoreductase subunit NuoD no data 56 95
o Variovorax sp. OAS795 ABID97_RS20480 NADH-quinone oxidoreductase subunit D no data 57 95
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3684 NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) cofit 58 95
o Ralstonia sp. UNC404CL21Col ABZR87_RS14865 NADH-quinone oxidoreductase subunit D no data 57 95
o Cupriavidus basilensis FW507-4G11 RR42_RS05525 NADH dehydrogenase subunit D no data 56 95
o Ralstonia solanacearum GMI1000 RS_RS10330 NADH-quinone oxidoreductase subunit NuoD no data 56 95
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS02960 NADH-quinone oxidoreductase subunit NuoD no data 56 95
o Ralstonia solanacearum UW163 UW163_RS10765 NADH-quinone oxidoreductase subunit NuoD no data 56 95
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04570 NADH dehydrogenase subunit D no data 56 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS24135 NADH-quinone oxidoreductase subunit D no data 56 95
o Burkholderia phytofirmans PsJN BPHYT_RS06640 NADH-quinone oxidoreductase subunit D no data 56 95
o Paraburkholderia graminis OAS925 ABIE53_001593 NADH-quinone oxidoreductase subunit D no data 56 95
o Castellaniella sp019104865 MT123 ABCV34_RS08735 NADH-quinone oxidoreductase subunit D no data 55 95
o Dechlorosoma suillum PS Dsui_3047 NADH dehydrogenase I, D subunit no data 56 95
o Kangiella aquimarina DSM 16071 B158DRAFT_0124 NADH dehydrogenase subunit D (EC 1.6.5.3) strong 57 95
o Lysobacter sp. OAE881 ABIE51_RS08325 NADH-quinone oxidoreductase subunit D no data 54 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1986.1 NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) no data 51 100
o Rhodanobacter sp. FW510-T8 OKGIIK_05780 nuoD NADH-quinone oxidoreductase subunit D no data 53 95
o Rhodanobacter denitrificans MT42 LRK55_RS00890 NADH-quinone oxidoreductase subunit D no data 53 95
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS01115 NADH-quinone oxidoreductase subunit D no data 53 95
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS08950 NADH-quinone oxidoreductase subunit D no data 53 95
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS06100 NADH-quinone oxidoreductase subunit D no data 53 95
  Sinorhizobium meliloti 1021 SMa1529 NuoD2 NADH I chain D insig. 47 98
o Mycobacterium tuberculosis H37Rv Rv3148 Probable NADH dehydrogenase I (chain D) NuoD (NADH-ubiquinone oxidoreductase chain D) strong 42 97
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_04260 NADH-quinone oxidoreductase subunit C/D insig. 42 93
  Shewanella oneidensis MR-1 SO1019 nuoCD NADH dehydrogenase I, C/D subunits (NCBI ptt file) cofit 42 93
  Pseudomonas sp. BP01 JOY50_RS06975 nuoC NADH-quinone oxidoreductase subunit C/D insig. 41 93
  Pseudomonas sp. SVBP6 COO64_RS24280 nuoC NADH-quinone oxidoreductase subunit C/D sig. 41 93
o Synechocystis sp000284455 PCC 6803 SGL_RS08920 NAD(P)H-quinone oxidoreductase subunit H no data 42 95
  Pseudomonas putida KT2440 PP_4121 NADH-quinone oxidoreductase subunit C/D strong 41 93
  Pseudomonas segetis P6 ACVTMO_RS12715 nuoC NADH-quinone oxidoreductase subunit C/D strong 41 93
  Dickeya dadantii 3937 DDA3937_RS14325 NADH-quinone oxidoreductase subunit C/D no data 41 93
  Rhodopseudomonas palustris CGA009 TX73_022080 NADH-quinone oxidoreductase subunit C/D strong 41 94
  Pseudomonas syringae pv. syringae B728a Psyr_3199 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C sig. 40 93
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3199 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C strong 40 93
  Pseudomonas fluorescens FW300-N2E3 AO353_27750 NADH:ubiquinone oxidoreductase no data 40 93
  Pseudomonas sp. S08-1 OH686_00145 NADH-ubiquinone oxidoreductase chain C / NADH-ubiquinone oxidoreductase chain D strong 41 93
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2631 NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) strong 41 93
  Dickeya dianthicola ME23 DZA65_RS14975 NADH-quinone oxidoreductase subunit C/D no data 41 93
  Dickeya dianthicola 67-19 HGI48_RS14300 NADH-quinone oxidoreductase subunit C/D insig. 41 93
  Pseudomonas sp. DMC3 GFF1510 NADH-quinone oxidoreductase subunit C/D cofit 40 93
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4039 NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) strong 40 93
  Pseudomonas protegens RBAN4 FABNJH_20165 nuoC NADH-quinone oxidoreductase subunit C/D insig. 40 93
  Pseudomonas fluorescens FW300-N2C3 AO356_22060 NADH:ubiquinone oxidoreductase no data 40 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_275 NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) no data 40 93
  Pseudomonas aeruginosa MRSN321 DY961_RS04020 nuoC;go_component=NADH NADH-quinone oxidoreductase subunit C/D strong 40 93
  Pseudomonas aeruginosa PA14 IKLFDK_13250 NADH-quinone oxidoreductase subunit C/D strong 40 93
  Pseudomonas aeruginosa PUPa3 DQ20_RS35050 nuoC;go_component=NADH NADH-quinone oxidoreductase subunit C/D strong 40 93
  Pseudomonas sp. RS175 PFR28_02629 NADH-quinone oxidoreductase subunit C/D no data 40 93
  Pseudomonas fluorescens SBW25 PFLU_RS18625 NADH-quinone oxidoreductase subunit C/D strong 40 93
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18625 NADH-quinone oxidoreductase subunit C/D strong 40 93
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03644 NADH-quinone oxidoreductase subunit C/D strong 40 93
  Pseudomonas simiae WCS417 PS417_16585 NADH:ubiquinone oxidoreductase no data 40 93
  Escherichia coli ECRC100 OKFHMN_22850 nuoC NADH-quinone oxidoreductase subunit C/D cofit 41 93
  Escherichia coli ECRC101 MCAODC_13890 nuoC NADH-quinone oxidoreductase subunit C/D strong 41 93
  Escherichia coli ECRC102 NIAGMN_20620 nuoC NADH-quinone oxidoreductase subunit C/D strong 41 93
  Escherichia coli ECRC98 JDDGAC_26815 nuoC NADH-quinone oxidoreductase subunit C/D strong 41 93
  Escherichia coli ECRC99 KEDOAH_05345 nuoC NADH-quinone oxidoreductase subunit C/D no data 41 93
  Escherichia fergusonii Becca EFB2_01573 NADH-quinone oxidoreductase subunit C/D insig. 41 93
  Escherichia coli Nissle 1917 ECOLIN_RS13275 NADH-quinone oxidoreductase subunit C/D strong 41 93
  Escherichia coli BW25113 b2286 nuoC NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) strong 41 93
  Serratia liquefaciens MT49 IAI46_17700 NADH-quinone oxidoreductase subunit C/D strong 40 93
  Escherichia coli BL21 ECD_02211 NADH:ubiquinone oxidoreductase, fused CD subunit strong 41 93
  Escherichia coli ECOR27 NOLOHH_14470 nuoC NADH-quinone oxidoreductase subunit C/D strong 41 93
  Escherichia coli ECOR38 HEPCGN_22055 nuoC NADH-quinone oxidoreductase subunit C/D strong 41 93
  Escherichia coli ECRC62 BNILDI_13390 nuoC NADH-quinone oxidoreductase subunit C/D strong 41 93
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01420 NADH-quinone oxidoreductase subunit C/D strong 41 93
  Pectobacterium carotovorum WPP14 HER17_RS07135 NADH-quinone oxidoreductase subunit C/D cofit 40 93
  Enterobacter sp. TBS_079 MPMX20_03216 NADH-quinone oxidoreductase subunit C/D strong 41 93
  Pseudomonas orientalis W4I3 QF045_RS18350 NADH-quinone oxidoreductase subunit C/D strong 39 93
  Enterobacter asburiae PDN3 EX28DRAFT_0323 NADH (or F420H2) dehydrogenase, subunit C strong 40 93
  Klebsiella pneumoniae MKP103 KDGMDA_27060 NADH-quinone oxidoreductase subunit C/D sig. 40 93
  Klebsiella pneumoniae MRSN742743 KFA93_RS06095 nuoC;go_component=NADH NADH-quinone oxidoreductase subunit C/D insig. 40 93
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1889 NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) strong 40 93
  Rahnella sp. WP5 EX31_RS19425 NADH-quinone oxidoreductase subunit C/D cofit 40 93
o Synechococcus elongatus PCC 7942 Synpcc7942_1743 ndhH NAD(P)H-quinone oxidoreductase subunit H no data 40 95
  Klebsiella michiganensis M5al BWI76_RS20180 NADH-quinone oxidoreductase subunit C/D strong 39 93
  Acinetobacter baumannii LAC-4 RR41_RS15500 NADH-quinone oxidoreductase subunit C/D no data 39 93
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14215 NADH dehydrogenase (quinone) subunit D no data 39 93
  Erwinia amylovora T8 OLJFJH_11420 NADH-quinone oxidoreductase subunit C/D strong 39 93
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS06580 nuoC NADH-quinone oxidoreductase subunit C/D strong 39 93
  Erwinia tracheiphila SCR3 LU632_RS07975 nuoC NADH-quinone oxidoreductase subunit C/D strong 39 93
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_18055 nuoC NADH-quinone oxidoreductase subunit C/D strong 39 93
  Pantoea sp. MT58 IAI47_06370 NADH-quinone oxidoreductase subunit C/D strong 39 93
  Acinetobacter radioresistens SK82 MPMX26_02553 NADH-quinone oxidoreductase subunit C/D no data 38 93
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23545 NADH dehydrogenase subunit D strong 39 96
o Desulfovibrio vulgaris Miyazaki F DvMF_1596 NADH dehydrogenase (quinone) (RefSeq) strong 39 94
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10150 NADH-quinone oxidoreductase subunit D no data 38 93
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17160 NADH-quinone oxidoreductase subunit D no data 38 96
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18290 NADH dehydrogenase subunit D strong 37 93
  Phocaeicola dorei CL03T12C01 ABI39_RS08530 NADH-quinone oxidoreductase subunit D insig. 36 94
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13325 NADH-quinone oxidoreductase subunit D strong 36 94
  Bacteroides thetaiotaomicron VPI-5482 BT4065 NADH dehydrogenase I, chain D (NCBI ptt file) strong 35 94
  Bacteroides ovatus ATCC 8483 BACOVA_04860 respiratory-chain NADH dehydrogenase, 49 Kd subunit strong 35 94
  Bacteroides stercoris CC31F HMPREF1181_RS09010 NADH-quinone oxidoreductase subunit D sig. 35 96
  Rhodospirillum rubrum S1H Rru_A1425 NADH dehydrogenase (ubiquinone) (NCBI) insig. 32 94
  Desulfovibrio vulgaris Miyazaki F DvMF_3189 NADH dehydrogenase (quinone) (RefSeq) sig. 30 96
  Desulfovibrio vulgaris Hildenborough JW710 DVU2291 carbon monoxide-induced hydrogenase CooH, putative (TIGR) insig. 30 93
  Desulfovibrio vulgaris Miyazaki F DvMF_1522 NADH-ubiquinone oxidoreductase chain 49kDa (RefSeq) cofit 31 89
  Desulfovibrio vulgaris Hildenborough JW710 DVU0430 Ech hydrogenase, subunit EchE, putative (TIGR) sig. 29 91
  Rhodospirillum rubrum S1H Rru_A0316 NADH-ubiquinone oxidoreductase (NCBI) insig. 28 95
  Rahnella sp. WP5 EX31_RS19920 hydrogenase large subunit insig. 26 100
  Dickeya dianthicola ME23 DZA65_RS07830 hydrogenase large subunit insig. 27 96
  Dickeya dadantii 3937 DDA3937_RS07445 hydrogenase large subunit insig. 27 96
  Dickeya dianthicola 67-19 HGI48_RS07320 hydrogenase large subunit insig. 27 96
  Escherichia coli ECOR38 HEPCGN_21040 hyfG hydrogenase 4 catalytic subunit HyfG insig. 27 100
  Escherichia coli ECRC100 OKFHMN_21870 hyfG hydrogenase 4 catalytic subunit HyfG insig. 27 100
  Escherichia coli ECRC101 MCAODC_12400 hyfG hydrogenase 4 catalytic subunit HyfG insig. 27 100
  Escherichia coli ECRC102 NIAGMN_19640 hyfG hydrogenase 4 catalytic subunit HyfG insig. 27 100
  Escherichia coli ECRC98 JDDGAC_25815 hyfG hydrogenase 4 catalytic subunit HyfG insig. 27 100
  Escherichia coli ECRC99 KEDOAH_06350 hyfG hydrogenase 4 catalytic subunit HyfG no data 27 100
  Escherichia coli BL21 ECD_02571 hydrogenase 3, large subunit insig. 26 100
  Escherichia fergusonii Becca EFB2_01202 Formate hydrogenlyase subunit 5 cofit 26 100
  Escherichia coli ECOR27 NOLOHH_12435 hycE formate hydrogenlyase subunit HycE insig. 26 100
  Escherichia coli ECOR38 HEPCGN_19780 hycE formate hydrogenlyase subunit HycE insig. 26 100
  Escherichia coli ECRC100 OKFHMN_20590 hycE formate hydrogenlyase subunit HycE cofit 26 100
  Escherichia coli ECRC101 MCAODC_11115 hycE formate hydrogenlyase subunit HycE insig. 26 100
  Escherichia coli ECRC102 NIAGMN_18360 hycE formate hydrogenlyase subunit HycE cofit 26 100
  Escherichia coli ECRC62 BNILDI_10985 hycE formate hydrogenlyase subunit HycE insig. 26 100
  Escherichia coli ECRC98 JDDGAC_24255 hycE formate hydrogenlyase subunit HycE insig. 26 100
  Escherichia coli ECRC99 KEDOAH_07545 hycE formate hydrogenlyase subunit HycE no data 26 100
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01013 Formate hydrogenlyase subunit 5 insig. 26 100
  Escherichia coli Nissle 1917 ECOLIN_RS15205 formate hydrogenlyase subunit HycE insig. 26 100
  Escherichia coli BW25113 b2721 hycE hydrogenase 3, large subunit (NCBI) insig. 26 100
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4714 Formate hydrogenlyase subunit 5 cofit 26 100
  Escherichia coli ECOR27 NOLOHH_13525 hyfG hydrogenase 4 catalytic subunit HyfG insig. 28 100
  Serratia liquefaciens MT49 IAI46_12520 hydrogenase large subunit insig. 25 93
  Klebsiella pneumoniae MKP103 KDGMDA_02990 formate hydrogenlyase subunit HycE insig. 25 100
  Klebsiella pneumoniae MRSN742743 KFA93_RS18820 hycE;inference=COORDINATES formate hydrogenlyase subunit HycE insig. 25 100
  Klebsiella michiganensis M5al BWI76_RS22320 hydrogenase 3 large subunit insig. 25 100
  Enterobacter sp. TBS_079 MPMX20_03606 Formate hydrogenlyase subunit 5 insig. 25 100
  Enterobacter asburiae PDN3 EX28DRAFT_2812 Ni,Fe-hydrogenase III large subunit insig. 26 94
  Azospirillum sp. SherDot2 MPMX19_03510 Formate hydrogenlyase subunit 5 insig. 27 94
  Azospirillum brasilense Sp245 AZOBR_RS14510 hydrogenase expression protein HypE insig. 26 90
  Methanococcus maripaludis S2 MMP_RS07520 nickel-dependent hydrogenase large subunit no data 25 91
  Methanococcus maripaludis JJ MMJJ_RS06840 nickel-dependent hydrogenase large subunit strong 25 91
  Xanthobacter sp. DMC5 GFF2061 Formate hydrogenlyase subunit 5 insig. 26 84
  Methanococcus maripaludis JJ MMJJ_RS08405 nickel-dependent hydrogenase large subunit strong 26 93
  Methanococcus maripaludis S2 MMP_RS05950 nickel-dependent hydrogenase large subunit strong 26 93
  Escherichia coli ECRC62 BNILDI_12330 hyfG hydrogenase 4 catalytic subunit HyfG insig. 26 100
  Escherichia coli BL21 ECD_02379 hydrogenase 4, subunit insig. 26 100
  Escherichia coli BW25113 b2487 hyfG hydrogenase 4, subunit (NCBI) insig. 26 100
  Magnetospirillum magneticum AMB-1 AMB_RS01050 hydrogenase expression protein HypE insig. 25 90
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01239 Hydrogenase-4 component G insig. 26 100
  Rhodanobacter denitrificans MT42 LRK55_RS17200 nickel-dependent hydrogenase large subunit cofit 26 96
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17725 nickel-dependent hydrogenase large subunit insig. 26 96
  Mycobacterium tuberculosis H37Rv Rv0087 Possible formate hydrogenase HycE (FHL) no data 29 71
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS11730 NADH-quinone oxidoreductase subunit C insig. 27 70
  Rhodanobacter sp. FW510-T8 OKGIIK_07605 hycE1 Ni,Fe-hydrogenase III large subunit insig. 26 67
  Rhodanobacter denitrificans MT42 LRK55_RS17510 NADH-quinone oxidoreductase subunit C cofit 26 67
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17285 NADH-quinone oxidoreductase subunit C strong 26 67