Homologs of GFF1893 from Xanthobacter sp. DMC5

Ribonuclease PH
SEED: Ribonuclease PH (EC 2.7.7.56)
KEGG: ribonuclease PH

163 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF1893 Ribonuclease PH no data 100 100
o Rhodopseudomonas palustris CGA009 TX73_001710 ribonuclease PH insig. 78 97
o Bosea sp. OAE506 ABIE41_RS03295 ribonuclease PH insig. 71 96
o Agrobacterium fabrum C58 Atu0327 ribonuclease PH no data 70 96
o Rhizobium sp. OAE497 ABIE40_RS01640 ribonuclease PH cofit 71 96
o Sinorhizobium meliloti 1021 SMc01144 ribonuclease PH strong 70 96
o Magnetospirillum magneticum AMB-1 AMB_RS22760 ribonuclease PH insig. 68 97
o Azospirillum brasilense Sp245 AZOBR_RS02205 ribonuclease PH insig. 64 96
o Rhodospirillum rubrum S1H Rru_A3641 Ribonuclease PH (NCBI) insig. 63 96
o Azospirillum sp. SherDot2 MPMX19_02576 Ribonuclease PH insig. 63 97
o Caulobacter crescentus NA1000 CCNA_00151 ribonuclease PH sig. 62 97
o Caulobacter crescentus NA1000 Δfur CCNA_00151 ribonuclease PH cofit 62 97
o Dinoroseobacter shibae DFL-12 Dshi_3463 ribonuclease PH (RefSeq) sig. 65 96
o Dechlorosoma suillum PS Dsui_0494 ribonuclease PH insig. 62 96
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13125 ribonuclease PH insig. 60 96
o Ralstonia solanacearum PSI07 RPSI07_RS13840 ribonuclease PH no data 61 97
o Ralstonia solanacearum GMI1000 RS_RS10830 ribonuclease PH no data 61 97
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS03345 ribonuclease PH insig. 60 97
o Ralstonia solanacearum UW163 UW163_RS10375 ribonuclease PH insig. 60 97
o Shewanella loihica PV-4 Shew_3488 ribonuclease PH (RefSeq) strong 61 96
o Marinobacter adhaerens HP15 HP15_300 ribonuclease PH strong 59 96
o Shewanella oneidensis MR-1 SO4256 rph ribonuclease PH (NCBI ptt file) strong 60 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS15255 ribonuclease PH strong 59 97
o Shewanella sp. ANA-3 Shewana3_3777 RNAse PH (RefSeq) strong 59 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS11900 ribonuclease PH strong 59 97
o Sphingobium sp. HT1-2 GFF2617 Ribonuclease PH (EC 2.7.7.56) insig. 62 97
o Phaeobacter inhibens DSM 17395 PGA1_c35030 ribonuclease PH sig. 60 96
o Lysobacter sp. OAE881 ABIE51_RS17285 ribonuclease PH cofit 59 98
o Pseudomonas sp. S08-1 OH686_13570 ribonuclease PH insig. 60 95
o Variovorax sp. SCN45 GFF2381 Ribonuclease PH (EC 2.7.7.56) cofit 58 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS03645 ribonuclease PH cofit 58 96
o Methylophilus sp. DMC18 GFF2136 Ribonuclease PH insig. 57 96
o Alteromonas macleodii MIT1002 MIT1002_04071 Ribonuclease PH strong 58 96
o Vibrio cholerae E7946 ATCC 55056 CSW01_01115 ribonuclease PH insig. 59 95
o Kangiella aquimarina DSM 16071 B158DRAFT_0588 ribonuclease PH cofit 57 96
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1221.1 Ribonuclease PH (EC 2.7.7.56) sig. 59 98
o Pseudomonas aeruginosa MRSN321 DY961_RS12560 rph;go_function=tRNA-specific ribonuclease PH strong 59 96
o Pseudomonas aeruginosa PA14 IKLFDK_26785 ribonuclease PH strong 59 96
o Pseudomonas aeruginosa PUPa3 DQ20_RS49565 rph;go_function=tRNA-specific ribonuclease PH sig. 59 96
o Pseudomonas segetis P6 ACVTMO_RS00150 rph ribonuclease PH strong 58 96
o Dickeya dianthicola 67-19 HGI48_RS00675 ribonuclease PH cofit 59 96
o Dickeya dianthicola ME23 DZA65_RS00730 ribonuclease PH insig. 59 96
o Shewanella amazonensis SB2B Sama_0320 tRNA nucleotidyltransferase (RefSeq) strong 57 96
o Pseudomonas stutzeri RCH2 Psest_3813 ribonuclease PH sig. 58 96
o Pseudomonas sp. DMC3 GFF415 Ribonuclease PH cofit 58 96
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2117 Ribonuclease PH (EC 2.7.7.56) strong 58 96
o Dickeya dadantii 3937 DDA3937_RS20540 ribonuclease PH cofit 59 96
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4365 Ribonuclease PH (EC 2.7.7.56) strong 57 96
o Herbaspirillum seropedicae SmR1 HSERO_RS10655 ribonuclease PH sig. 56 96
o Pseudomonas protegens RBAN4 FABNJH_30565 rph ribonuclease PH insig. 57 96
o Pseudomonas fluorescens FW300-N2E3 AO353_09260 ribonuclease PH strong 57 96
o Pseudomonas sp. RS175 PFR28_04420 Ribonuclease PH strong 58 95
o Cupriavidus basilensis FW507-4G11 RR42_RS04890 ribonuclease PH sig. 57 97
o Pseudomonas syringae pv. syringae B728a Psyr_0213 RNAse PH sig. 57 96
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0213 RNAse PH insig. 57 96
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00030 Ribonuclease PH insig. 57 96
o Pseudomonas fluorescens FW300-N2C3 AO356_12500 ribonuclease PH strong 57 96
o Pseudomonas orientalis W4I3 QF045_RS02165 ribonuclease PH cofit 57 96
o Pseudomonas fluorescens GW456-L13 PfGW456L13_784 Ribonuclease PH (EC 2.7.7.56) strong 56 97
o Variovorax sp. OAS795 ABID97_RS23640 ribonuclease PH sig. 57 96
o Pseudomonas fluorescens SBW25 PFLU_RS29490 ribonuclease PH strong 57 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS29490 ribonuclease PH strong 57 96
o Pseudomonas simiae WCS417 PS417_27810 ribonuclease PH strong 57 96
o Burkholderia phytofirmans PsJN BPHYT_RS15325 ribonuclease PH sig. 56 96
o Rhodanobacter sp. FW510-T8 OKGIIK_12150 rph ribonuclease PH no data 58 97
o Paraburkholderia graminis OAS925 ABIE53_003234 ribonuclease PH strong 57 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04008 RNAse PH sig. 56 96
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS16795 ribonuclease PH no data 58 97
o Rhodanobacter denitrificans MT42 LRK55_RS11470 ribonuclease PH insig. 58 97
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS11745 ribonuclease PH strong 58 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3254 Ribonuclease PH (EC 2.7.7.56) insig. 55 97
o Castellaniella sp019104865 MT123 ABCV34_RS03515 ribonuclease PH cofit 57 100
o Pseudomonas sp. SVBP6 COO64_RS01510 rph ribonuclease PH insig. 56 96
o Pseudomonas sp. BP01 JOY50_RS09025 rph ribonuclease PH cofit 55 96
o Pseudomonas putida KT2440 PP_5294 Ribonuclease PH strong 54 96
o Pectobacterium carotovorum WPP14 HER17_RS20855 ribonuclease PH cofit 59 96
o Erwinia amylovora T8 OLJFJH_05765 ribonuclease PH sig. 60 96
o Escherichia fergusonii Becca EFB2_00170 Ribonuclease PH sig. 58 96
o Escherichia coli ECOR27 NOLOHH_07470 rph ribonuclease PH insig. 58 96
o Escherichia coli ECOR38 HEPCGN_14410 rph ribonuclease PH insig. 58 96
o Escherichia coli ECRC100 OKFHMN_15590 rph ribonuclease PH cofit 58 96
o Escherichia coli ECRC101 MCAODC_06100 rph ribonuclease PH sig. 58 96
o Escherichia coli ECRC102 NIAGMN_13350 rph ribonuclease PH sig. 58 96
o Escherichia coli ECRC98 JDDGAC_19215 rph ribonuclease PH strong 58 96
o Escherichia coli ECRC99 KEDOAH_12555 rph ribonuclease PH no data 58 96
o Escherichia coli Nissle 1917 ECOLIN_RS20755 ribonuclease PH cofit 58 96
o Escherichia coli BL21 ECD_03500 ribonuclease PH sig. 58 96
o Escherichia coli ECRC62 BNILDI_04045 rph ribonuclease PH cofit 58 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00059 Ribonuclease PH sig. 58 96
o Klebsiella michiganensis M5al BWI76_RS27390 ribonuclease PH strong 58 96
o Serratia liquefaciens MT49 IAI46_24850 ribonuclease PH insig. 58 96
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF366 Ribonuclease PH (EC 2.7.7.56) sig. 57 96
o Enterobacter sp. TBS_079 MPMX20_00092 Ribonuclease PH insig. 58 96
o Enterobacter asburiae PDN3 EX28DRAFT_3893 ribonuclease PH insig. 58 96
o Klebsiella pneumoniae MKP103 KDGMDA_08055 ribonuclease PH strong 57 96
o Klebsiella pneumoniae MRSN742743 KFA93_RS09105 rph;go_function=tRNA ribonuclease PH sig. 57 96
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_07755 rph ribonuclease PH cofit 58 96
o Erwinia tracheiphila SCR3 LU632_RS22020 rph ribonuclease PH sig. 58 96
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2741 ribonuclease PH no data 60 97
o Acinetobacter radioresistens SK82 MPMX26_00040 Ribonuclease PH strong 55 97
o Acinetobacter baumannii LAC-4 RR41_RS18695 ribonuclease PH no data 55 97
o Acidovorax sp. GW101-3H11 Ac3H11_3670 Ribonuclease PH (EC 2.7.7.56) insig. 56 93
o Pantoea sp. MT58 IAI47_00595 ribonuclease PH sig. 56 96
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS00585 rph ribonuclease PH cofit 56 96
o Escherichia coli BW25113 b3643 rph ribonuclease PH (NCBI) strong 59 86
o Rahnella sp. WP5 EX31_RS14505 ribonuclease PH cofit 57 96
o Bifidobacterium breve UCC2003 BBR_RS12405 ribonuclease PH strong 54 93
  Fusobacterium nucleatum SB010 HUW76_01880 ribonuclease PH strong 47 95
o Synechococcus elongatus PCC 7942 Synpcc7942_1073 rph ribonuclease PH insig. 49 95
o Mycobacterium tuberculosis H37Rv Rv1340 Probable ribonuclease RphA (RNase PH) (tRNA nucleotidyltransferase) no data 50 96
  Ralstonia solanacearum GMI1000 RS_RS10375 polyribonucleotide nucleotidyltransferase insig. 27 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS24175 polyribonucleotide nucleotidyltransferase no data 26 87
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03005 polyribonucleotide nucleotidyltransferase insig. 27 93
  Ralstonia solanacearum UW163 UW163_RS10720 polyribonucleotide nucleotidyltransferase no data 27 93
  Ralstonia solanacearum PSI07 RPSI07_RS14305 polyribonucleotide nucleotidyltransferase insig. 27 93
  Ralstonia sp. UNC404CL21Col ABZR87_RS14910 polyribonucleotide nucleotidyltransferase strong 27 93
  Dechlorosoma suillum PS Dsui_2718 polyribonucleotide nucleotidyltransferase sig. 27 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04562 polyribonucleotide nucleotidyltransferase sig. 26 92
  Paraburkholderia graminis OAS925 ABIE53_001586 polyribonucleotide nucleotidyltransferase strong 26 87
  Methylophilus sp. DMC18 GFF2832 Polyribonucleotide nucleotidyltransferase cofit 27 92
  Castellaniella sp019104865 MT123 ABCV34_RS01240 polyribonucleotide nucleotidyltransferase no data 28 87
  Cupriavidus basilensis FW507-4G11 RR42_RS05485 polynucleotide phosphorylase/polyadenylase strong 27 87
  Burkholderia phytofirmans PsJN BPHYT_RS06600 polynucleotide phosphorylase/polyadenylase sig. 25 92
  Magnetospirillum magneticum AMB-1 AMB_RS20820 polyribonucleotide nucleotidyltransferase no data 26 91
  Synechocystis sp000284455 PCC 6803 SGL_RS02295 polyribonucleotide nucleotidyltransferase no data 26 86
  Herbaspirillum seropedicae SmR1 HSERO_RS08755 polynucleotide phosphorylase/polyadenylase no data 25 92
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3677 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) no data 26 78
  Kangiella aquimarina DSM 16071 B158DRAFT_0104 polyribonucleotide nucleotidyltransferase no data 22 96
  Pseudomonas stutzeri RCH2 Psest_0986 polyribonucleotide nucleotidyltransferase no data 25 80
  Pseudomonas sp. S08-1 OH686_17165 polyribonucleotide nucleotidyltransferase cofit 24 80
  Rhodospirillum rubrum S1H Rru_A3785 3' exoribonuclease (NCBI) no data 23 91
  Acidovorax sp. GW101-3H11 Ac3H11_1456 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) no data 26 78
  Pseudomonas sp. BP01 JOY50_RS26855 pnp polyribonucleotide nucleotidyltransferase no data 25 78
  Pseudomonas protegens RBAN4 FABNJH_04410 pnp polyribonucleotide nucleotidyltransferase no data 25 78
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1156 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) no data 25 78
  Pseudomonas segetis P6 ACVTMO_RS05975 pnp polyribonucleotide nucleotidyltransferase no data 25 80
  Acinetobacter radioresistens SK82 MPMX26_00275 Polyribonucleotide nucleotidyltransferase insig. 27 64
  Pseudomonas sp. SVBP6 COO64_RS15150 pnp polyribonucleotide nucleotidyltransferase no data 25 78
  Pseudomonas fluorescens FW300-N2E3 AO353_05540 polyribonucleotide nucleotidyltransferase no data 25 78
  Pseudomonas fluorescens FW300-N2C3 AO356_07390 polyribonucleotide nucleotidyltransferase insig. 25 78
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3349 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) strong 25 78
  Pseudomonas fluorescens SBW25 PFLU_RS25790 polyribonucleotide nucleotidyltransferase strong 25 78
  Pseudomonas fluorescens SBW25-INTG PFLU_RS25790 polyribonucleotide nucleotidyltransferase strong 25 78
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04941 Polyribonucleotide nucleotidyltransferase cofit 25 78
  Pseudomonas putida KT2440 PP_4708 Polyribonucleotide nucleotidyltransferase no data 25 78
  Azospirillum brasilense Sp245 AZOBR_RS01385 polynucleotide phosphorylase no data 25 87
  Pseudomonas fluorescens GW456-L13 PfGW456L13_5084 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) no data 25 78
  Pseudomonas orientalis W4I3 QF045_RS26205 polyribonucleotide nucleotidyltransferase no data 25 78
  Pseudomonas simiae WCS417 PS417_23950 polynucleotide phosphorylase/polyadenylase strong 25 78
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13355 polyribonucleotide nucleotidyltransferase no data 24 91
  Bosea sp. OAE506 ABIE41_RS04595 polyribonucleotide nucleotidyltransferase no data 23 90
  Variovorax sp. OAS795 ABID97_RS20520 polyribonucleotide nucleotidyltransferase strong 26 78
  Pseudomonas sp. DMC3 GFF4992 Polyribonucleotide nucleotidyltransferase cofit 25 78
  Dinoroseobacter shibae DFL-12 Dshi_2997 Polyribonucleotide nucleotidyltransferase (RefSeq) no data 23 91
  Pseudomonas syringae pv. syringae B728a Psyr_4176 Polyribonucleotide nucleotidyltransferase no data 25 78
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4176 Polyribonucleotide nucleotidyltransferase no data 25 78
  Xanthobacter sp. DMC5 GFF2302 Polyribonucleotide nucleotidyltransferase no data 23 87
  Phaeobacter inhibens DSM 17395 PGA1_c33000 polyribonucleotide nucleotidyltransferase Pnp no data 23 91
  Pseudomonas sp. RS175 PFR28_00094 Polyribonucleotide nucleotidyltransferase no data 25 78
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS09090 polyribonucleotide nucleotidyltransferase sig. 22 91
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS06005 polyribonucleotide nucleotidyltransferase no data 22 80
  Rhodanobacter denitrificans MT42 LRK55_RS00800 polyribonucleotide nucleotidyltransferase no data 22 91
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS01025 polyribonucleotide nucleotidyltransferase no data 22 91