Homologs of CSW01_09600 from Vibrio cholerae E7946 ATCC 55056

DNA-binding protein HU-beta
SEED: DNA-binding protein HU-beta

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_09600 DNA-binding protein HU-beta cofit 100 100
o Alteromonas macleodii MIT1002 MIT1002_02756 hypothetical protein no data 77 100
o Erwinia tracheiphila SCR3 LU632_RS18330 hupB DNA-binding protein HU-beta insig. 73 100
o Shewanella oneidensis MR-1 SO1797 DNA-binding protein, HU family (NCBI ptt file) no data 72 100
o Enterobacter asburiae PDN3 EX28DRAFT_2530 Bacterial nucleoid DNA-binding protein cofit 73 100
o Enterobacter sp. TBS_079 MPMX20_01031 DNA-binding protein HU-beta strong 73 100
o Klebsiella michiganensis M5al BWI76_RS06540 DNA-binding protein HU-beta strong 73 100
o Escherichia coli BL21 ECD_00392 HU, DNA-binding transcriptional regulator, beta subunit strong 73 100
o Escherichia fergusonii Becca EFB2_03617 DNA-binding protein HU-beta insig. 73 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03233 DNA-binding protein HU-beta strong 73 100
o Escherichia coli BW25113 b0440 hupB HU, DNA-binding transcriptional regulator, beta subunit (NCBI) strong 73 100
o Rahnella sp. WP5 EX31_RS22260 DNA-binding protein HU-beta insig. 72 100
o Shewanella sp. ANA-3 Shewana3_2658 histone family protein DNA-binding protein (RefSeq) no data 71 100
o Serratia liquefaciens MT49 IAI46_05025 DNA-binding protein HU-beta insig. 72 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4356 DNA-binding protein HU-beta cofit 73 100
o Pantoea sp. MT58 IAI47_14640 DNA-binding protein HU-beta sig. 72 100
o Escherichia coli Nissle 1917 ECOLIN_RS02640 nucleoid-associated protein HU-beta insig. 72 100
o Shewanella loihica PV-4 Shew_2505 histone family protein DNA-binding protein (RefSeq) no data 70 100
o Escherichia coli ECOR27 NOLOHH_01250 hupB DNA-binding protein HU-beta cofit 72 100
o Escherichia coli ECOR38 HEPCGN_06930 hupB DNA-binding protein HU-beta cofit 72 100
o Escherichia coli ECRC101 OKFHMN_08315 hupB DNA-binding protein HU-beta insig. 72 100
o Escherichia coli ECRC101 MCAODC_27540 hupB DNA-binding protein HU-beta insig. 72 100
o Escherichia coli ECRC102 NIAGMN_06370 hupB DNA-binding protein HU-beta insig. 72 100
o Escherichia coli ECRC62 BNILDI_22665 hupB DNA-binding protein HU-beta insig. 72 100
o Escherichia coli ECRC98 JDDGAC_11970 hupB DNA-binding protein HU-beta no data 72 100
o Escherichia coli ECRC99 KEDOAH_19650 hupB DNA-binding protein HU-beta no data 72 100
o Pseudomonas sp. S08-1 OH686_03630 DNA-binding protein HU-beta no data 71 100
o Dickeya dadantii 3937 DDA3937_RS05655 DNA-binding protein HU-beta insig. 71 100
o Dickeya dianthicola 67-19 HGI48_RS05700 DNA-binding protein HU-beta insig. 71 100
o Dickeya dianthicola ME23 DZA65_RS06025 DNA-binding protein HU-beta insig. 71 100
o Pectobacterium carotovorum WPP14 HER17_RS15835 DNA-binding protein HU-beta insig. 71 100
o Pseudomonas stutzeri RCH2 Psest_2284 Bacterial nucleoid DNA-binding protein no data 70 100
o Kangiella aquimarina DSM 16071 B158DRAFT_1039 Bacterial nucleoid DNA-binding protein strong 70 100
o Pseudomonas putida KT2440 PP_2303 DNA binding regulator, beta subunit B no data 70 100
o Marinobacter adhaerens HP15 HP15_2182 histone-like bacterial DNA-binding protein no data 69 99
o Shewanella amazonensis SB2B Sama_1227 HU family DNA-binding protein (RefSeq) no data 68 100
o Pseudomonas fluorescens SBW25 PFLU_RS19155 HU family DNA-binding protein no data 68 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19155 HU family DNA-binding protein no data 68 100
o Pseudomonas simiae WCS417 PS417_17220 transcriptional regulator HU subunit alpha no data 68 100
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4045.1 DNA-binding protein HU-beta no data 67 100
o Burkholderia phytofirmans PsJN BPHYT_RS09465 transcriptional regulator insig. 67 100
o Pseudomonas syringae pv. syringae B728a Psyr_1750 bacterial nucleoid protein HU beta subunit no data 67 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1750 bacterial nucleoid protein HU beta subunit no data 67 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS21970 HU family DNA-binding protein insig. 68 100
o Acidovorax sp. GW101-3H11 Ac3H11_376 DNA-binding protein HU-beta insig. 68 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00899 bacterial nucleoid protein Hbs no data 67 100
o Paraburkholderia graminis OAS925 ABIE53_002118 DNA-binding protein HU-beta sig. 67 100
o Dechlorosoma suillum PS Dsui_2199 bacterial nucleoid DNA-binding protein cofit 68 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2555 DNA-binding protein HU-beta no data 66 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3948 DNA-binding protein HU-beta no data 66 100
o Pseudomonas fluorescens FW300-N2E3 AO353_20190 DNA-binding protein HU no data 66 100
o Pseudomonas fluorescens FW300-N2C3 AO356_01735 DNA-binding protein HU no data 66 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2215 DNA-binding protein HU-beta no data 66 100
o Variovorax sp. OAS795 ABID97_RS10665 HU family DNA-binding protein no data 66 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07315 HU family DNA-binding protein no data 64 100
o Castellaniella sp019104865 MT123 ABCV34_RS06640 HU family DNA-binding protein no data 63 100
  Shewanella sp. ANA-3 Shewana3_0547 histone family protein DNA-binding protein (RefSeq) cofit 60 100
o Rhodanobacter denitrificans MT42 LRK55_RS16465 HU family DNA-binding protein no data 63 100
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16740 HU family DNA-binding protein sig. 63 100
o Rhodanobacter sp. FW510-T8 OKGIIK_08025 himA integration host factor subunit alpha no data 63 100
  Shewanella oneidensis MR-1 SO0548 DNA-binding protein, HU family (NCBI ptt file) insig. 60 100
o Variovorax sp. SCN45 GFF2853 DNA-binding protein HU-beta insig. 64 100
o Herbaspirillum seropedicae SmR1 HSERO_RS12900 transcriptional regulator HU subunit alpha no data 69 99
  Vibrio cholerae E7946 ATCC 55056 CSW01_01405 DNA-binding protein HU-alpha cofit 66 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3853 DNA-binding protein HU-beta strong 64 100
  Shewanella amazonensis SB2B Sama_3158 histone-like DNA-binding protein (RefSeq) insig. 58 100
o Acinetobacter radioresistens SK82 MPMX26_01331 DNA-binding protein HU-beta no data 61 99
o Lysobacter sp. OAE881 ABIE51_RS14140 HU family DNA-binding protein no data 62 100
  Klebsiella michiganensis M5al BWI76_RS01585 transcriptional regulator strong 62 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5425 DNA-binding protein HU-beta insig. 58 100
  Pantoea sp. MT58 IAI47_18055 DNA-binding protein HU-alpha strong 61 99
  Enterobacter asburiae PDN3 EX28DRAFT_4542 Bacterial nucleoid DNA-binding protein strong 61 99
  Enterobacter sp. TBS_079 MPMX20_00223 DNA-binding protein HU-alpha strong 61 99
  Lysobacter sp. OAE881 ABIE51_RS05120 HU family DNA-binding protein no data 60 99
  Shewanella loihica PV-4 Shew_0430 histone family protein DNA-binding protein (RefSeq) sig. 56 100
  Erwinia tracheiphila SCR3 LU632_RS01000 hupA DNA-binding protein HU-alpha insig. 61 99
  Rahnella sp. WP5 EX31_RS16845 DNA-binding protein HU-alpha cofit 61 99
  Serratia liquefaciens MT49 IAI46_01350 DNA-binding protein HU-alpha insig. 61 99
  Pectobacterium carotovorum WPP14 HER17_RS20350 DNA-binding protein HU-alpha strong 61 99
  Variovorax sp. SCN45 GFF1732 DNA-binding protein HU-beta no data 59 100
  Dickeya dadantii 3937 DDA3937_RS01205 DNA-binding protein HU-alpha no data 61 99
  Dickeya dianthicola 67-19 HGI48_RS01200 DNA-binding protein HU-alpha no data 61 99
  Dickeya dianthicola ME23 DZA65_RS01245 DNA-binding protein HU-alpha no data 61 99
  Escherichia coli BL21 ECD_03877 HU, DNA-binding transcriptional regulator, alpha subunit cofit 60 99
  Escherichia fergusonii Becca EFB2_04611 DNA-binding protein HU-alpha cofit 60 99
  Escherichia coli ECOR27 NOLOHH_05490 hupA DNA-binding protein HU-alpha no data 60 99
  Escherichia coli ECRC101 OKFHMN_13345 hupA DNA-binding protein HU-alpha strong 60 99
  Escherichia coli ECRC101 MCAODC_03845 hupA DNA-binding protein HU-alpha strong 60 99
  Escherichia coli ECRC102 NIAGMN_11095 hupA DNA-binding protein HU-alpha sig. 60 99
  Escherichia coli ECRC62 BNILDI_06035 hupA DNA-binding protein HU-alpha insig. 60 99
  Escherichia coli ECRC98 JDDGAC_16970 hupA DNA-binding protein HU-alpha no data 60 99
  Escherichia coli ECRC99 KEDOAH_14815 hupA DNA-binding protein HU-alpha no data 60 99
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04050 DNA-binding protein HU-alpha strong 60 99
  Escherichia coli Nissle 1917 ECOLIN_RS23070 nucleoid-associated protein HU-alpha no data 60 99
  Escherichia coli BW25113 b4000 hupA HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) strong 60 99
  Escherichia coli ECOR38 HEPCGN_11980 hupA DNA-binding protein HU-alpha cofit 60 99
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4192 DNA-binding protein HU-alpha strong 60 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS01335 HU family DNA-binding protein no data 60 100
o Ralstonia solanacearum GMI1000 RS_RS08660 HU family DNA-binding protein no data 60 100
o Ralstonia solanacearum PSI07 RPSI07_RS16140 HU family DNA-binding protein no data 60 100