Homologs of Atu4160 from Agrobacterium fabrum C58

RNA polymerase sigma factor
SEED: RNA polymerase sigma-54 factor RpoN
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu4160 RNA polymerase sigma factor strong 100 100
o Rhizobium sp. OAE497 ABIE40_RS14450 RNA polymerase sigma factor insig. 70 97
o Sinorhizobium meliloti 1021 SMc01506 RNA polymerase sigma factor strong 71 93
o Bosea sp. OAE506 ABIE41_RS04095 sigma-70 family RNA polymerase sigma factor strong 56 90
o Rhodopseudomonas palustris CGA009 TX73_021900 sigma-70 family RNA polymerase sigma factor strong 57 91
o Phaeobacter inhibens DSM 17395 PGA1_c27070 RNA polymerase sigma factor 70 (ECF15 subgroup, ECF26 subgroup) insig. 56 82
  Dinoroseobacter shibae DFL-12 Dshi_3835 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 57 80
  Xanthobacter sp. DMC5 GFF2321 ECF RNA polymerase sigma factor EcfG no data 53 83
  Sphingobium sp. HT1-2 GFF2317 RNA polymerase ECF-type sigma factor cofit 55 84
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3492 RNA polymerase sigma factor, sigma-70 family strong 54 81
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14775 sigma-70 family RNA polymerase sigma factor strong 53 82
  Caulobacter crescentus NA1000 CCNA_03589 RNA polymerase EcfG family sigma factor sigT strong 53 82
  Caulobacter crescentus NA1000 Δfur CCNA_03589 RNA polymerase EcfG family sigma factor sigT cofit 53 82
  Sphingobium sp. HT1-2 GFF4975 RNA polymerase ECF-type sigma factor cofit 51 85
  Sphingobium sp. HT1-2 GFF5151 RNA polymerase ECF-type sigma factor cofit 51 87
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3853 RNA polymerase sigma factor, sigma-70 family insig. 50 82
  Caulobacter crescentus NA1000 CCNA_02977 RNA polymerase ECF-type sigma factor sigU strong 48 85
  Caulobacter crescentus NA1000 Δfur CCNA_02977 RNA polymerase ECF-type sigma factor sigU cofit 48 85
  Rhodospirillum rubrum S1H Rru_A3287 Sigma-24 (FecI) (NCBI) no data 45 81
  Rhizobium sp. OAE497 ABIE40_RS27415 sigma-70 family RNA polymerase sigma factor insig. 45 82
o Paraburkholderia graminis OAS925 ABIE53_006215 RNA polymerase sigma-70 factor (ECF subfamily) insig. 43 82
o Burkholderia phytofirmans PsJN BPHYT_RS24740 RNA polymerase subunit sigma-24 sig. 43 82
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06547 RNA polymerase sigma-70 factor, ECF subfamily insig. 42 82
o Paraburkholderia sabiae LMG 24235 QEN71_RS00095 RNA polymerase sigma factor insig. 42 82
  Rhizobium sp. OAE497 ABIE40_RS21790 sigma-70 family RNA polymerase sigma factor cofit 44 85
  Azospirillum brasilense Sp245 AZOBR_RS06360 RNA polymerase subunit sigma-24 no data 45 78
  Sphingobium sp. HT1-2 GFF5325 RNA polymerase ECF-type sigma factor cofit 43 85
  Azospirillum sp. SherDot2 MPMX19_00764 ECF RNA polymerase sigma factor EcfG insig. 42 78
  Azospirillum sp. SherDot2 MPMX19_01371 hypothetical protein insig. 42 80
  Sinorhizobium meliloti 1021 SM_b21484 RNA polymerase sigma-E factor (sigma-24) protein insig. 41 73
  Sinorhizobium meliloti 1021 SMa0143 RNA polymerase ECF sigma factor insig. 43 80
  Azospirillum brasilense Sp245 AZOBR_RS10625 RNA polymerase sigma-70 factor insig. 42 78
  Agrobacterium fabrum C58 Atu5490 ECF family RNA polymerase sigma factor insig. 42 77
  Paraburkholderia graminis OAS925 ABIE53_002425 RNA polymerase sigma-70 factor (ECF subfamily) insig. 40 82
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05124 RNA polymerase sigma-70 factor, ECF subfamily insig. 40 82
  Burkholderia phytofirmans PsJN BPHYT_RS08240 RNA polymerase subunit sigma-24 sig. 40 82
  Rhizobium sp. OAE497 ABIE40_RS20320 sigma-70 family RNA polymerase sigma factor insig. 38 79
  Azospirillum sp. SherDot2 MPMX19_01197 ECF RNA polymerase sigma factor EcfG insig. 36 83
  Paraburkholderia sabiae LMG 24235 QEN71_RS23005 sigma-70 family RNA polymerase sigma factor insig. 40 82
o Bacteroides stercoris CC31F HMPREF1181_RS16950 RNA polymerase sigma factor strong 38 82
  Azospirillum brasilense Sp245 AZOBR_RS14755 RNA polymerase sigma-70 factor insig. 37 83
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19215 RNA polymerase subunit sigma sig. 38 85
  Variovorax sp. SCN45 GFF215 RNA polymerase sigma-54 factor RpoN insig. 38 80
  Sphingobium sp. HT1-2 GFF2028 hypothetical protein cofit 39 77
  Agrobacterium fabrum C58 Atu1485 ECF family sigma factor insig. 40 78
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4350 RNA polymerase sigma-54 factor RpoN insig. 38 87
o Phocaeicola dorei CL03T12C01 ABI39_RS07815 RNA polymerase sigma factor strong 36 80
  Herbaspirillum seropedicae SmR1 HSERO_RS13530 RNA polymerase subunit sigma-24 no data 38 88
  Phocaeicola dorei CL03T12C01 ABI39_RS17450 RNA polymerase sigma factor strong 36 80
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03770 RNA polymerase sigma factor strong 36 80
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12805 RNA polymerase sigma factor strong 36 80
  Cupriavidus basilensis FW507-4G11 RR42_RS32410 RNA polymerase subunit sigma-24 no data 39 77
  Sphingobium sp. HT1-2 GFF1466 RNA polymerase sigma-54 factor RpoN insig. 40 82
o Bacteroides ovatus ATCC 8483 BACOVA_01848 Sigma-70 region 2 strong 36 81
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05410 RNA polymerase sigma factor strong 35 84
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0287 RNA polymerase sigma factor, sigma-70 family strong 35 81
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1476 RNA polymerase sigma factor, sigma-70 family insig. 33 79
  Pseudomonas sp. DMC3 GFF1465 ECF RNA polymerase sigma factor EcfG insig. 36 81
  Bacteroides stercoris CC31F HMPREF1181_RS02840 RNA polymerase sigma factor sig. 34 81
  Azospirillum sp. SherDot2 MPMX19_00923 hypothetical protein insig. 39 80
  Bacteroides thetaiotaomicron VPI-5482 BT2569 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 35 81
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF329 RNA polymerase sigma-54 factor RpoN insig. 38 79
  Ralstonia solanacearum GMI1000 RS_RS14950 RNA polymerase sigma factor no data 39 78
  Sphingobium sp. HT1-2 GFF4551 hypothetical protein cofit 37 79
  Bacteroides ovatus ATCC 8483 BACOVA_02205 Sigma-70 region 2 sig. 34 81
  Bacteroides ovatus ATCC 8483 BACOVA_03979 Sigma-70 region 2 strong 34 81
  Bacteroides thetaiotaomicron VPI-5482 BT3457 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 34 81
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2200 RNA polymerase sigma-54 factor RpoN sig. 36 81
  Azospirillum brasilense Sp245 AZOBR_RS23735 RNA polymerase no data 34 78
  Bacteroides thetaiotaomicron VPI-5482 BT1572 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 33 82
  Ralstonia solanacearum PSI07 RPSI07_RS10230 RNA polymerase sigma factor no data 38 78
  Ralstonia sp. UNC404CL21Col ABZR87_RS02660 RNA polymerase sigma factor insig. 36 80
  Bacteroides thetaiotaomicron VPI-5482 BT1197 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 34 81
  Variovorax sp. OAS795 ABID97_RS16445 sigma-70 family RNA polymerase sigma factor no data 36 77
  Pseudomonas fluorescens FW300-N2C3 AO356_01625 RNA polymerase subunit sigma-24 insig. 38 77
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07010 RNA polymerase sigma factor no data 39 78
  Ralstonia solanacearum UW163 UW163_RS06605 RNA polymerase sigma factor no data 39 78
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10915 RNA polymerase subunit sigma strong 35 77
  Pseudomonas fluorescens FW300-N2E3 AO353_20305 RNA polymerase subunit sigma-24 no data 38 77
  Pseudomonas sp. RS175 PFR28_01251 ECF RNA polymerase sigma factor EcfG insig. 38 77
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2582 RNA polymerase sigma-54 factor RpoN insig. 37 77
  Mycobacterium tuberculosis H37Rv Rv3223c Alternative RNA polymerase sigma-E factor (sigma-24) SigH (RPOE) insig. 33 85
  Paraburkholderia graminis OAS925 ABIE53_003919 RNA polymerase sigma-70 factor (ECF subfamily) insig. 31 78
  Bacteroides ovatus ATCC 8483 BACOVA_04312 Sigma-70 region 2 insig. 32 82
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11995 RNA polymerase subunit sigma insig. 31 82
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05041 RNA polymerase sigma-70 factor, ECF subfamily insig. 37 73
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3411 RNA polymerase sigma factor, sigma-70 family insig. 37 74
  Dickeya dadantii 3937 DDA3937_RS11055 sigma-70 family RNA polymerase sigma factor insig. 35 80
  Dickeya dianthicola 67-19 HGI48_RS11075 sigma-70 family RNA polymerase sigma factor insig. 35 80
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1191 RNA polymerase sigma factor, sigma-70 family insig. 37 74
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3977 RNA polymerase sigma-54 factor RpoN insig. 37 77
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24230 RNA polymerase sigma factor strong 29 84
  Dechlorosoma suillum PS Dsui_1302 RNA polymerase sigma factor, sigma-70 family cofit 37 81
  Pseudomonas fluorescens SBW25 PFLU_RS19010 sigma-70 family RNA polymerase sigma factor insig. 37 77
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19010 sigma-70 family RNA polymerase sigma factor sig. 37 77
  Pseudomonas lactucae CFBP13502 GEMAOFIL_03722 ECF RNA polymerase sigma factor EcfG no data 36 77
  Azospirillum brasilense Sp245 AZOBR_RS11020 RNA polymerase subunit sigma-70 no data 38 74
  Rhizobium sp. OAE497 ABIE40_RS11455 RNA polymerase sigma factor insig. 32 84
  Magnetospirillum magneticum AMB-1 AMB_RS13315 hypothetical protein insig. 37 78
  Agrobacterium fabrum C58 Atu5283 ECF family RNA polymerase sigma factor no data 44 59
  Sinorhizobium meliloti 1021 SMc02713 RNA polymerase sigma-E factor (sigma-24) protein strong 33 88
  Pectobacterium carotovorum WPP14 HER17_RS09715 sigma-70 family RNA polymerase sigma factor cofit 32 80
  Enterobacter asburiae PDN3 EX28DRAFT_2729 RNA polymerase sigma factor, sigma-70 family insig. 34 79
  Pseudomonas putida KT2440 PP_2888 putative ECF sigma factor PrtI no data 38 80
  Bacteroides thetaiotaomicron VPI-5482 BT2383 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 34 82
  Bifidobacterium breve UCC2003 BBR_RS16820 RNA polymerase sigma factor RpoE strong 33 81
  Pseudomonas orientalis W4I3 QF045_RS18740 sigma-70 family RNA polymerase sigma factor insig. 37 77
  Paraburkholderia graminis OAS925 ABIE53_003943 RNA polymerase sigma-70 factor (ECF subfamily) sig. 35 73
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15765 RNA polymerase sigma factor strong 31 81
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16550 RNA polymerase sigma factor strong 31 84
  Phaeobacter inhibens DSM 17395 PGA1_78p00070 'RNA polymerase sigma-70, ECF subfamily; ECF26 subgroup' no data 33 78
  Pseudomonas simiae WCS417 PS417_17070 RNA polymerase subunit sigma-24 insig. 38 75
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02635 RNA polymerase sigma factor insig. 37 79
  Pseudomonas sp. BP01 JOY50_RS05860 sigma-70 family RNA polymerase sigma factor no data 38 80
  Kangiella aquimarina DSM 16071 B158DRAFT_0015 RNA polymerase sigma factor, sigma-70 family insig. 38 76
  Sinorhizobium meliloti 1021 SMc01419 RNA polymerase sigma factor protein sig. 31 84
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16675 hypothetical protein insig. 33 73
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12270 RNA polymerase subunit sigma insig. 32 76
  Pseudomonas sp. SVBP6 COO64_RS10855 sigma-70 family RNA polymerase sigma factor insig. 36 77
  Agrobacterium fabrum C58 Atu2030 ECF family sigma factor insig. 35 84
  Mycobacterium tuberculosis H37Rv Rv2069 RNA polymerase sigma factor, ECF subfamily, SigC insig. 41 64
  Sinorhizobium meliloti 1021 SMc04051 RNA polymerase sigma-E factor (sigma-24) protein insig. 36 80
  Alteromonas macleodii MIT1002 MIT1002_03872 RNA polymerase sigma factor SigM insig. 30 84
  Rahnella sp. WP5 EX31_RS05375 sigma-70 family RNA polymerase sigma factor insig. 31 87
  Enterobacter sp. TBS_079 MPMX20_03520 ECF RNA polymerase sigma factor EcfG insig. 31 74
  Paraburkholderia sabiae LMG 24235 QEN71_RS32245 RNA polymerase sigma factor insig. 31 84
  Pantoea sp. MT58 IAI47_21640 sigma-70 family RNA polymerase sigma factor insig. 31 74
  Azospirillum sp. SherDot2 MPMX19_05043 hypothetical protein insig. 31 77
  Pseudomonas orientalis W4I3 QF045_RS17270 sigma-70 family RNA polymerase sigma factor insig. 29 76
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05043 RNA polymerase sigma-70 factor, ECF subfamily no data 31 73
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06415 RNA polymerase sigma factor insig. 30 87
  Rhizobium sp. OAE497 ABIE40_RS03400 RNA polymerase sigma factor insig. 31 76
  Bosea sp. OAE506 ABIE41_RS07610 sigma-70 family RNA polymerase sigma factor insig. 34 74
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01554 RNA polymerase sigma-70 factor, ECF subfamily insig. 31 73
  Cupriavidus basilensis FW507-4G11 RR42_RS19070 DNA-directed RNA polymerase sigma-70 factor insig. 33 82
  Synechococcus elongatus PCC 7942 Synpcc7942_1923 sigG RNA polymerase sigma factor RpoE strong 36 70
  Phocaeicola dorei CL03T12C01 ABI39_RS09920 sigma-70 family RNA polymerase sigma factor insig. 32 77
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS12225 RNA polymerase sigma factor cofit 30 74
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14290 sigma-70 family RNA polymerase sigma factor insig. 32 77
  Rhizobium sp. OAE497 ABIE40_RS22730 RNA polymerase sigma factor insig. 32 77
  Rhodanobacter sp. FW510-T8 OKGIIK_06725 rpoE RNA polymerase subunit sigma-70 insig. 36 69
  Rhodanobacter denitrificans MT42 LRK55_RS00300 RNA polymerase sigma factor insig. 36 69
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS09585 RNA polymerase sigma factor no data 36 69
  Paraburkholderia graminis OAS925 ABIE53_002003 RNA polymerase sigma factor (sigma-70 family) sig. 30 90
  Vibrio cholerae E7946 ATCC 55056 CSW01_05315 RNA polymerase subunit sigma insig. 33 76
  Alteromonas macleodii MIT1002 MIT1002_01278 RNA polymerase sigma factor SigV insig. 32 77
  Variovorax sp. SCN45 GFF5806 RNA polymerase ECF-type sigma factor insig. 36 87
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS04785 sigma-70 family RNA polymerase sigma factor insig. 32 74
  Serratia liquefaciens MT49 IAI46_22980 RNA polymerase sigma factor insig. 33 70
  Mycobacterium tuberculosis H37Rv Rv1221 Alternative RNA polymerase sigma factor SigE insig. 32 77
  Klebsiella pneumoniae MKP103 KDGMDA_28480 RNA polymerase sigma factor RpoE no data 36 63
  Klebsiella pneumoniae MRSN742743 KFA93_RS04695 rpoE;go_function=DNA RNA polymerase sigma factor RpoE no data 36 63
  Klebsiella michiganensis M5al BWI76_RS21355 RNA polymerase sigma factor RpoE no data 36 63
  Pseudomonas stutzeri RCH2 Psest_3456 RNA polymerase sigma factor, sigma-70 family insig. 32 70
  Synechocystis sp000284455 PCC 6803 SGL_RS06480 sigma-70 family RNA polymerase sigma factor no data 32 70
  Dinoroseobacter shibae DFL-12 Dshi_2428 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 30 74
  Burkholderia phytofirmans PsJN BPHYT_RS08845 RNA polymerase sigma factor insig. 32 89
  Bacteroides stercoris CC31F HMPREF1181_RS08110 sigma-70 family RNA polymerase sigma factor insig. 32 68
  Enterobacter asburiae PDN3 EX28DRAFT_0072 RNA polymerase sigma factor RpoE no data 35 63
  Enterobacter sp. TBS_079 MPMX20_03444 ECF RNA polymerase sigma-E factor no data 35 63
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2107 RNA polymerase sigma factor RpoE no data 35 63
  Shewanella amazonensis SB2B Sama_2036 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 30 77
  Rhizobium sp. OAE497 ABIE40_RS13310 RNA polymerase sigma factor insig. 28 83
  Variovorax sp. OAS795 ABID97_RS21865 sigma-70 family RNA polymerase sigma factor insig. 31 86
  Escherichia coli BL21 ECD_02467 RNA polymerase sigma E factor no data 35 63
  Escherichia fergusonii Becca EFB2_01323 ECF RNA polymerase sigma-E factor no data 35 63
  Escherichia coli ECOR27 NOLOHH_13050 rpoE RNA polymerase sigma factor RpoE no data 35 63
  Escherichia coli ECOR38 HEPCGN_20520 rpoE RNA polymerase sigma factor RpoE no data 35 63
  Escherichia coli ECRC100 OKFHMN_21375 rpoE RNA polymerase sigma factor RpoE no data 35 63
  Escherichia coli ECRC101 MCAODC_11905 rpoE RNA polymerase sigma factor RpoE no data 35 63
  Escherichia coli ECRC102 NIAGMN_19145 rpoE RNA polymerase sigma factor RpoE no data 35 63
  Escherichia coli ECRC62 BNILDI_11850 rpoE RNA polymerase sigma factor RpoE no data 35 63
  Escherichia coli ECRC98 JDDGAC_25040 rpoE RNA polymerase sigma factor RpoE no data 35 63
  Escherichia coli ECRC99 KEDOAH_06845 rpoE RNA polymerase sigma factor RpoE no data 35 63
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01134 ECF RNA polymerase sigma-E factor no data 35 63
  Escherichia coli Nissle 1917 ECOLIN_RS14560 RNA polymerase sigma factor RpoE no data 35 63
  Escherichia coli BW25113 b2573 rpoE RNA polymerase, sigma 24 (sigma E) factor (NCBI) no data 35 63
  Shewanella sp. ANA-3 Shewana3_0763 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 28 81
  Erwinia tracheiphila SCR3 LU632_RS15425 rpoE RNA polymerase sigma factor RpoE strong 34 63
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00565 RNA polymerase sigma factor insig. 33 61
  Rhodanobacter denitrificans MT42 LRK55_RS16655 RNA polymerase sigma factor RpoE no data 31 71
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16940 RNA polymerase sigma factor RpoE strong 31 71
  Methylophilus sp. DMC18 GFF2730 RNA polymerase sigma-H factor no data 30 68
  Rahnella sp. WP5 EX31_RS18905 sigma-70 family RNA polymerase sigma factor insig. 28 78
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS14740 RNA polymerase sigma factor RpoE no data 35 63
  Shewanella sp. ANA-3 Shewana3_1453 RNA polymerase sigma factor (RefSeq) sig. 33 74
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0726 RNA polymerase sigma factor, sigma-70 family insig. 30 76
  Rhodanobacter denitrificans MT42 LRK55_RS04975 sigma-70 family RNA polymerase sigma factor cofit 31 74
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05195 sigma-70 family RNA polymerase sigma factor insig. 31 74
  Burkholderia phytofirmans PsJN BPHYT_RS21845 hypothetical protein insig. 30 73
  Xanthobacter sp. DMC5 GFF1190 ECF RNA polymerase sigma factor SigR insig. 30 81
  Pantoea sp. MT58 IAI47_04850 RNA polymerase sigma factor RpoE no data 35 63
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_01235 rpoE RNA polymerase sigma factor RpoE strong 34 63
  Rahnella sp. WP5 EX31_RS21800 RNA polymerase sigma factor RpoE no data 34 63
  Phocaeicola dorei CL03T12C01 ABI39_RS03560 RNA polymerase sigma factor insig. 27 80
  Shewanella oneidensis MR-1 SO3096 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) strong 31 74
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12005 RNA polymerase sigma factor RpoE no data 29 71
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13165 RNA polymerase sigma factor insig. 29 72
  Shewanella oneidensis MR-1 SO3840 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 28 81
  Marinobacter adhaerens HP15 HP15_342 RNA polymerase sigma factor SigE insig. 32 79
  Paraburkholderia sabiae LMG 24235 QEN71_RS22515 RNA polymerase sigma factor insig. 32 78
  Bacteroides thetaiotaomicron VPI-5482 BT0188 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 28 74
  Enterobacter asburiae PDN3 EX28DRAFT_2390 RNA polymerase sigma factor, sigma-70 family cofit 27 78
  Bacteroides ovatus ATCC 8483 BACOVA_01251 RNA polymerase sigma-70 factor sig. 27 74
  Erwinia amylovora T8 OLJFJH_10215 RNA polymerase sigma factor RpoE strong 34 63
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09175 RNA polymerase sigma factor sig. 30 80
  Alteromonas macleodii MIT1002 MIT1002_01916 RNA polymerase sigma factor CarQ insig. 29 79
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11965 RNA polymerase subunit sigma insig. 26 72
  Bacteroides ovatus ATCC 8483 BACOVA_00669 Sigma-70 region 2 insig. 33 68
  Bacteroides thetaiotaomicron VPI-5482 BT2044 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 33 68
  Pseudomonas fluorescens FW300-N2C3 AO356_10740 RNA polymerase subunit sigma insig. 31 77
  Cupriavidus basilensis FW507-4G11 RR42_RS14080 RNA polymerase sigma factor RpoE strong 29 72
  Rhodanobacter sp. FW510-T8 OKGIIK_07900 rpoE RNA polymerase sigma factor RpoE strong 29 71
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16945 RNA polymerase sigma factor sig. 28 72
  Rhodanobacter sp. FW510-T8 OKGIIK_14780 RNA polymerase subunit sigma-70 insig. 29 74
  Burkholderia phytofirmans PsJN BPHYT_RS14405 RNA polymerase sigma factor RpoE no data 29 68
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04355 RNA polymerase, sigma-24 subunit, RpoE no data 29 68
  Paraburkholderia graminis OAS925 ABIE53_003043 RNA polymerase sigma-70 factor (ECF subfamily) strong 29 68
  Paraburkholderia sabiae LMG 24235 QEN71_RS04575 RNA polymerase sigma factor RpoE strong 29 68
  Phocaeicola dorei CL03T12C01 ABI39_RS12855 RNA polymerase sigma factor insig. 28 72
  Bacteroides thetaiotaomicron VPI-5482 BT4347 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 27 72
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2751 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 25 85
  Bacteroides ovatus ATCC 8483 BACOVA_02602 Sigma-70 region 2 cofit 36 43
  Serratia liquefaciens MT49 IAI46_19585 RNA polymerase sigma factor RpoE no data 35 63
  Marinobacter adhaerens HP15 HP15_775 RNA polymerase sigma-70 RpoE type insig. 31 68
  Rhizobium sp. OAE497 ABIE40_RS15675 sigma-70 family RNA polymerase sigma factor insig. 29 83
  Bacteroides ovatus ATCC 8483 BACOVA_05165 Sigma-70 region 2 insig. 28 72
  Kangiella aquimarina DSM 16071 B158DRAFT_2027 RNA polymerase sigma factor, sigma-70 family insig. 32 68
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4527 RNA polymerase sigma-70 factor, ECF subfamily insig. 32 74
  Rhizobium sp. OAE497 ABIE40_RS18210 sigma-70 family RNA polymerase sigma factor insig. 31 77
  Shewanella loihica PV-4 Shew_2433 RNA polymerase sigma factor (RefSeq) no data 30 76
  Pseudomonas orientalis W4I3 QF045_RS03845 RNA polymerase sigma factor insig. 32 77
  Pseudomonas syringae pv. syringae B728a Psyr_0892 Sigma-70 region 2:Sigma-70 region 4 insig. 29 74
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0892 Sigma-70 region 2:Sigma-70 region 4 insig. 29 74
  Paraburkholderia sabiae LMG 24235 QEN71_RS36705 RNA polymerase sigma factor insig. 29 73
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07180 RNA polymerase sigma factor RpoE strong 31 68
  Marinobacter adhaerens HP15 HP15_950 RNA polymerase, sigma-24 subunit, ECF subfamily insig. 29 78
  Pantoea sp. MT58 IAI47_19735 sigma-70 family RNA polymerase sigma factor insig. 26 78
  Acidovorax sp. GW101-3H11 Ac3H11_1573 RNA polymerase sigma factor RpoE no data 30 68
  Marinobacter adhaerens HP15 HP15_p187g100 RNA polymerase sigma factor insig. 26 82
  Pectobacterium carotovorum WPP14 HER17_RS05780 RNA polymerase sigma factor RpoE no data 33 63
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4018 RNA polymerase sigma-E factor insig. 32 77
  Pseudomonas fluorescens FW300-N2E3 AO353_21275 RNA polymerase subunit sigma insig. 31 71
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS00445 sigma-70 family RNA polymerase sigma factor insig. 30 74
  Ralstonia sp. UNC404CL21Col ABZR87_RS10165 RNA polymerase sigma factor RpoE strong 29 72
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14445 RNA polymerase sigma factor RpoE strong 29 72
  Ralstonia solanacearum GMI1000 RS_RS05225 RNA polymerase sigma factor RpoE strong 29 72
  Ralstonia solanacearum PSI07 RPSI07_RS19015 RNA polymerase sigma factor RpoE strong 29 72
  Ralstonia solanacearum UW163 UW163_RS11910 RNA polymerase sigma factor RpoE insig. 29 72
  Bacteroides stercoris CC31F HMPREF1181_RS04900 RNA polymerase sigma-70 factor insig. 27 74