Homologs of Atu2700 from Agrobacterium fabrum C58

16S rRNA processing protein
SEED: 16S rRNA processing protein RimM
KEGG: 16S rRNA processing protein RimM

110 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu2700 16S rRNA processing protein no data 100 100
o Rhizobium sp. OAE497 ABIE40_RS18350 ribosome maturation factor RimM no data 75 93
o Sinorhizobium meliloti 1021 SMc03860 16S rRNA-processing protein RimM no data 75 100
o Rhodopseudomonas palustris CGA009 TX73_001260 ribosome maturation factor RimM insig. 47 87
o Bosea sp. OAE506 ABIE41_RS11745 ribosome maturation factor RimM no data 47 92
o Rhodospirillum rubrum S1H Rru_A1186 16S rRNA processing protein RimM (NCBI) no data 47 90
o Xanthobacter sp. DMC5 GFF1912 Ribosome maturation factor RimM no data 40 96
o Dinoroseobacter shibae DFL-12 Dshi_0344 16S rRNA processing protein RimM (RefSeq) no data 42 87
  Azospirillum brasilense Sp245 AZOBR_RS03520 16S rRNA-processing protein RimM no data 40 87
  Azospirillum sp. SherDot2 MPMX19_00324 Ribosome maturation factor RimM no data 40 87
o Phaeobacter inhibens DSM 17395 PGA1_c00540 putative 16S rRNA-processing protein RimM no data 43 85
o Caulobacter crescentus NA1000 CCNA_03766 16S rRNA processing protein RimM no data 40 96
o Caulobacter crescentus NA1000 Δfur CCNA_03766 16S rRNA processing protein RimM cofit 40 96
  Magnetospirillum magneticum AMB-1 AMB_RS20545 ribosome maturation factor RimM no data 41 80
o Kangiella aquimarina DSM 16071 B158DRAFT_2262 16S rRNA processing protein RimM no data 36 87
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14860 ribosome maturation factor RimM no data 42 79
o Pseudomonas segetis P6 ACVTMO_RS07770 rimM ribosome maturation factor RimM no data 33 87
o Sphingomonas koreensis DSMZ 15582 Ga0059261_4160 16S rRNA processing protein RimM no data 38 82
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1717 16S rRNA processing protein RimM no data 35 87
  Sphingobium sp. HT1-2 GFF3806 16S rRNA processing protein RimM no data 40 75
o Ralstonia sp. UNC404CL21Col ABZR87_RS09605 ribosome maturation factor RimM no data 35 85
o Pseudomonas sp. S08-1 OH686_17730 16S rRNA processing protein RimM no data 34 87
o Pseudomonas syringae pv. syringae B728a Psyr_1283 16S rRNA processing protein RimM no data 34 87
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1283 16S rRNA processing protein RimM no data 34 87
  Cupriavidus basilensis FW507-4G11 RR42_RS04625 16S rRNA processing protein RimM no data 31 85
o Pseudomonas fluorescens FW300-N2E3 AO353_04380 16S rRNA processing protein RimM no data 34 87
  Pseudomonas putida KT2440 PP_1463 Ribosome maturation factor RimM no data 35 87
  Pseudomonas fluorescens SBW25 PFLU_RS24575 ribosome maturation factor RimM no data 33 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24575 ribosome maturation factor RimM no data 33 87
  Pseudomonas sp. BP01 JOY50_RS11680 rimM ribosome maturation factor RimM no data 35 87
  Pseudomonas sp. SVBP6 COO64_RS04885 rimM ribosome maturation factor RimM no data 33 87
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS13910 ribosome maturation factor RimM no data 34 85
  Ralstonia solanacearum UW163 UW163_RS15900 ribosome maturation factor RimM no data 34 85
  Pseudomonas aeruginosa PA14 IKLFDK_19115 ribosome maturation factor RimM no data 35 87
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08820 ribosome maturation factor RimM no data 34 87
  Pseudomonas sp. DMC3 GFF1983 Ribosome maturation factor RimM no data 33 87
  Pseudomonas aeruginosa MRSN321 DY961_RS14250 rimM;go_function=RNA ribosome maturation factor RimM no data 35 87
  Pseudomonas aeruginosa PUPa3 DQ20_RS42875 rimM;go_function=RNA ribosome maturation factor RimM no data 35 87
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04732 Ribosome maturation factor RimM no data 33 87
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_872 16S rRNA processing protein RimM no data 33 87
  Pseudomonas stutzeri RCH2 Psest_3132 16S rRNA processing protein RimM no data 31 87
  Pseudomonas simiae WCS417 PS417_22915 16S rRNA processing protein RimM no data 33 87
  Alteromonas macleodii MIT1002 MIT1002_01309 hypothetical protein no data 30 87
  Klebsiella pneumoniae MKP103 KDGMDA_02215 ribosome maturation factor RimM no data 29 87
  Klebsiella pneumoniae MRSN742743 KFA93_RS24650 rimM;go_component=ribosome|0005840||IEA;go_function=ribosome ribosome maturation factor RimM no data 29 87
  Pseudomonas protegens RBAN4 FABNJH_05665 rimM ribosome maturation factor RimM no data 33 87
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_01525 rimM ribosome maturation factor RimM no data 30 87
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3767.1 16S rRNA processing protein RimM no data 33 87
  Erwinia tracheiphila SCR3 LU632_RS15660 rimM ribosome maturation factor RimM no data 30 87
  Enterobacter asburiae PDN3 EX28DRAFT_2711 16S rRNA processing protein RimM no data 29 87
  Bifidobacterium breve UCC2003 BBR_RS12290 ribosome maturation factor RimM no data 37 91
  Pseudomonas orientalis W4I3 QF045_RS25105 ribosome maturation factor RimM no data 33 87
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS07440 ribosome maturation factor RimM no data 32 87
  Pseudomonas fluorescens FW300-N2C3 AO356_06400 16S rRNA processing protein RimM no data 31 87
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3148 16S rRNA processing protein RimM no data 31 87
  Ralstonia solanacearum PSI07 RPSI07_RS19560 ribosome maturation factor RimM no data 32 85
  Lysobacter sp. OAE881 ABIE51_RS07745 ribosome maturation factor RimM no data 32 87
  Shewanella loihica PV-4 Shew_1064 rimM 16S rRNA-processing protein (RefSeq) no data 28 87
  Ralstonia solanacearum GMI1000 RS_RS04645 ribosome maturation factor RimM no data 32 85
  Acidovorax sp. GW101-3H11 Ac3H11_1685 16S rRNA processing protein RimM no data 31 85
  Vibrio cholerae E7946 ATCC 55056 CSW01_03000 ribosome maturation factor RimM no data 30 87
  Rhodanobacter sp. FW510-T8 OKGIIK_09560 rimM ribosome maturation factor RimM no data 32 87
  Enterobacter sp. TBS_079 MPMX20_03478 Ribosome maturation factor RimM no data 28 87
  Klebsiella michiganensis M5al BWI76_RS21520 ribosome maturation factor RimM no data 29 87
  Pseudomonas sp. RS175 PFR28_00328 Ribosome maturation factor RimM no data 31 87
  Pectobacterium carotovorum WPP14 HER17_RS05120 ribosome maturation factor RimM no data 29 87
  Shewanella amazonensis SB2B Sama_0890 rimM 16S rRNA-processing protein RimM (RefSeq) no data 29 87
  Erwinia amylovora T8 OLJFJH_09660 ribosome maturation factor RimM no data 29 87
  Shewanella sp. ANA-3 Shewana3_3016 rimM 16S rRNA-processing protein RimM (RefSeq) no data 28 87
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02505 ribosome maturation factor RimM no data 32 87
  Dechlorosoma suillum PS Dsui_3514 16S rRNA processing protein RimM no data 29 87
  Escherichia coli BL21 ECD_02497 ribosome maturation factor no data 27 87
  Escherichia fergusonii Becca EFB2_01284 Ribosome maturation factor RimM no data 27 87
  Escherichia coli ECOR27 NOLOHH_12855 rimM ribosome maturation factor RimM no data 27 87
  Escherichia coli ECOR38 HEPCGN_20300 rimM ribosome maturation factor RimM no data 27 87
  Escherichia coli ECRC100 OKFHMN_21180 rimM ribosome maturation factor RimM no data 27 87
  Escherichia coli ECRC101 MCAODC_11710 rimM ribosome maturation factor RimM no data 27 87
  Escherichia coli ECRC102 NIAGMN_18950 rimM ribosome maturation factor RimM no data 27 87
  Escherichia coli ECRC62 BNILDI_11660 rimM ribosome maturation factor RimM no data 27 87
  Escherichia coli ECRC98 JDDGAC_24845 rimM ribosome maturation factor RimM no data 27 87
  Escherichia coli ECRC99 KEDOAH_07040 rimM ribosome maturation factor RimM no data 27 87
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01098 Ribosome maturation factor RimM no data 27 87
  Escherichia coli Nissle 1917 ECOLIN_RS14740 ribosome maturation factor RimM no data 27 87
  Escherichia coli BW25113 b2608 yfjA orf, hypothetical protein (VIMSS) no data 27 87
  Methylophilus sp. DMC18 GFF2338 Ribosome maturation factor RimM no data 31 87
  Dickeya dianthicola ME23 DZA65_RS17375 ribosome maturation factor RimM no data 30 87
  Dickeya dadantii 3937 DDA3937_RS16170 ribosome maturation factor RimM no data 30 87
  Shewanella oneidensis MR-1 SO1358 rimM 16S rRNA processing protein RimM (NCBI ptt file) no data 27 87
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4171 16S rRNA processing protein RimM no data 27 87
  Pantoea sp. MT58 IAI47_04380 ribosome maturation factor RimM no data 29 87
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS04750 rimM ribosome maturation factor RimM no data 29 87
  Acinetobacter baumannii LAC-4 RR41_RS01715 ribosome maturation factor RimM no data 28 87
  Synechococcus elongatus PCC 7942 Synpcc7942_2259 rimM 16S rRNA-processing protein strong 36 91
  Dickeya dianthicola 67-19 HGI48_RS16280 ribosome maturation factor RimM no data 30 87
  Rhodanobacter denitrificans MT42 LRK55_RS02260 ribosome maturation factor RimM no data 30 87
  Rahnella sp. WP5 EX31_RS07720 ribosome maturation factor RimM no data 26 87
  Desulfovibrio vulgaris Hildenborough JW710 DVU0837 rimM 16S rRNA processing protein RimM (TIGR) no data 34 87
  Herbaspirillum seropedicae SmR1 HSERO_RS07580 ribosome maturation factor RimM no data 30 85
  Serratia liquefaciens MT49 IAI46_03925 ribosome maturation factor RimM no data 27 85
  Acinetobacter radioresistens SK82 MPMX26_02784 Ribosome maturation factor RimM no data 26 87
  Desulfovibrio vulgaris Miyazaki F DvMF_2885 16S rRNA processing protein RimM (RefSeq) insig. 33 85
  Marinobacter adhaerens HP15 HP15_759 16S rRNA-processing protein RimM no data 29 87
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1339 16S rRNA processing protein RimM no data 30 86
  Variovorax sp. OAS795 ABID97_RS08745 ribosome maturation factor RimM no data 32 84
  Paraburkholderia graminis OAS925 ABIE53_003127 16S rRNA processing protein RimM no data 30 83
  Variovorax sp. SCN45 GFF3950 16S rRNA processing protein RimM no data 30 85
  Synechocystis sp000284455 PCC 6803 SGL_RS09820 ribosome maturation factor RimM strong 33 91
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5739 16S rRNA processing protein RimM no data 28 87
  Mycobacterium tuberculosis H37Rv Rv2907c Probable 16S rRNA processing protein RimM no data 32 87
  Castellaniella sp019104865 MT123 ABCV34_RS05580 ribosome maturation factor RimM no data 27 85