Homologs of ribD from Shewanella oneidensis MR-1

ribD: riboflavin biosynthesis protein RibD (NCBI ptt file)
SEED: Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)
KEGG: diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO3469 ribD riboflavin biosynthesis protein RibD (NCBI ptt file) no data 100 100
o Shewanella sp. ANA-3 Shewana3_1096 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase (RefSeq) no data 94 100
o Shewanella loihica PV-4 Shew_1187 riboflavin biosynthesis protein RibD (RefSeq) no data 69 98
o Shewanella amazonensis SB2B Sama_1016 diaminohydroxyphosphoribosylaminopyrimidine deaminase., 5-amino-6-(5-phosphoribosylamino)uracil reductase (RefSeq) no data 69 97
o Pantoea sp. MT58 IAI47_14770 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 54 96
o Pseudomonas fluorescens SBW25 PFLU_RS26900 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 54 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26900 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 54 96
o Pectobacterium carotovorum WPP14 HER17_RS15960 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 52 96
o Pseudomonas fluorescens FW300-N2E3 AO353_06715 diaminohydroxyphosphoribosylaminopyrimidine deaminase no data 54 95
o Escherichia coli ECOR27 NOLOHH_01400 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 53 95
o Escherichia coli BL21 ECD_00362 fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase no data 53 94
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03262 Riboflavin biosynthesis protein RibD no data 53 94
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1313 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) no data 54 96
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2649 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) no data 53 96
o Escherichia coli BW25113 b0414 ribD fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase (NCBI) no data 53 94
o Escherichia coli ECRC62 BNILDI_22815 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 52 96
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4919 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) no data 54 96
o Erwinia tracheiphila SCR3 LU632_RS18595 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 52 96
o Vibrio cholerae E7946 ATCC 55056 CSW01_11560 riboflavin biosynthesis protein RibD strong 52 96
o Pseudomonas stutzeri RCH2 Psest_3552 riboflavin biosynthesis protein RibD no data 54 96
o Pseudomonas sp. RS175 PFR28_03949 Riboflavin biosynthesis protein RibD no data 53 96
o Enterobacter asburiae PDN3 EX28DRAFT_2556 diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) no data 52 94
o Pseudomonas fluorescens FW300-N2C3 AO356_14930 diaminohydroxyphosphoribosylaminopyrimidine deaminase no data 53 96
o Escherichia coli ECOR38 HEPCGN_07080 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 53 95
o Serratia liquefaciens MT49 IAI46_04895 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 51 96
o Escherichia coli ECRC101 OKFHMN_08455 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 53 95
o Escherichia coli ECRC101 MCAODC_27680 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 53 95
o Escherichia coli ECRC102 NIAGMN_06510 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 53 95
o Escherichia coli ECRC98 JDDGAC_12110 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 53 95
o Escherichia coli ECRC99 KEDOAH_19510 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 53 95
o Escherichia coli Nissle 1917 ECOLIN_RS02505 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 53 94
o Marinobacter adhaerens HP15 HP15_492 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase no data 52 96
o Klebsiella michiganensis M5al BWI76_RS06350 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase no data 52 94
o Rahnella sp. WP5 EX31_RS22125 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 53 96
o Pseudomonas simiae WCS417 PS417_25265 diaminohydroxyphosphoribosylaminopyrimidine deaminase no data 53 96
o Pseudomonas putida KT2440 PP_0514 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase no data 52 96
o Escherichia fergusonii Becca EFB2_03643 Riboflavin biosynthesis protein RibD no data 53 94
o Pseudomonas sp. S08-1 OH686_15695 riboflavin biosynthesis protein RibD no data 55 96
o Pseudomonas syringae pv. syringae B728a Psyr_4462 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase no data 54 94
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4462 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase no data 54 94
o Dickeya dianthicola 67-19 HGI48_RS05565 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 52 96
o Enterobacter sp. TBS_079 MPMX20_01006 Riboflavin biosynthesis protein RibD no data 52 94
o Dickeya dadantii 3937 DDA3937_RS05505 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 51 96
o Dickeya dianthicola ME23 DZA65_RS05890 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 51 96
o Kangiella aquimarina DSM 16071 B158DRAFT_1910 diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) no data 50 97
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4395.1 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) no data 51 96
o Alteromonas macleodii MIT1002 MIT1002_02700 Riboflavin biosynthesis protein RibD no data 49 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4318 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) no data 52 94
o Rhodanobacter denitrificans MT42 LRK55_RS04385 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 52 95
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS04610 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 52 95
o Lysobacter sp. OAE881 ABIE51_RS04630 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 48 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS10705 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 51 95
o Rhodanobacter sp. FW510-T8 OKGIIK_11430 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 51 96
o Acinetobacter radioresistens SK82 MPMX26_00152 Riboflavin biosynthesis protein RibD no data 49 96
o Ralstonia sp. UNC404CL21Col ABZR87_RS08885 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 44 98
o Ralstonia solanacearum PSI07 RPSI07_RS20395 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 45 98
o Ralstonia solanacearum GMI1000 RS_RS03600 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 44 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS12825 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 44 98
o Ralstonia solanacearum UW163 UW163_RS00740 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 44 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04019 diaminohydroxyphosphoribosylaminopyrimidine deaminase no data 43 97
o Cupriavidus basilensis FW507-4G11 RR42_RS15555 diaminohydroxyphosphoribosylaminopyrimidine deaminase no data 44 97
o Burkholderia phytofirmans PsJN BPHYT_RS15380 diaminohydroxyphosphoribosylaminopyrimidine deaminase no data 43 99
o Dechlorosoma suillum PS Dsui_1267 riboflavin biosynthesis protein RibD no data 50 96
o Paraburkholderia graminis OAS925 ABIE53_003242 diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase no data 43 97
o Herbaspirillum seropedicae SmR1 HSERO_RS18235 diaminohydroxyphosphoribosylaminopyrimidine deaminase no data 44 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS03300 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 42 97
o Phaeobacter inhibens DSM 17395 PGA1_c08870 riboflavin biosynthesis protein RibD no data 43 95
o Azospirillum sp. SherDot2 MPMX19_00736 Riboflavin biosynthesis protein RibD no data 41 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5160 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) no data 45 95
o Magnetospirillum magneticum AMB-1 AMB_RS11825 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 43 94
o Variovorax sp. OAS795 ABID97_RS17935 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 41 98
o Variovorax sp. SCN45 GFF568 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) no data 45 85
o Fusobacterium nucleatum SB010 HUW76_09285 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD strong 41 86
o Castellaniella sp019104865 MT123 ABCV34_RS10545 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 44 97
o Rhodopseudomonas palustris CGA009 TX73_014125 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 42 94
o Azospirillum brasilense Sp245 AZOBR_RS10025 5-amino-6-(5-phosphoribosylamino)uracil reductase no data 42 94
o Synechococcus elongatus PCC 7942 Synpcc7942_0203 ribD 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase no data 38 93
o Rhodospirillum rubrum S1H Rru_A1825 bifunctional deaminase-reductase (NCBI) no data 44 86
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS11285 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 40 86
  Rhizobium sp. OAE497 ABIE40_RS06725 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD strong 45 68
o Acidovorax sp. GW101-3H11 Ac3H11_1461 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) no data 40 81
o Dinoroseobacter shibae DFL-12 Dshi_2256 riboflavin biosynthesis protein RibD (RefSeq) no data 40 94
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0964 riboflavin biosynthesis protein RibD no data 38 84
o Agrobacterium fabrum C58 Atu8148 bifunctional riboflavin deaminase-reductase no data 36 97
  Sinorhizobium meliloti 1021 SMc01772 riboflavin biosynthesis protein no data 45 66
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10210 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 34 95
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17890 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase no data 39 85
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2336 diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) no data 38 93
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09530 riboflavin biosynthesis protein RibD no data 32 85
o Mycobacterium tuberculosis H37Rv Rv1409 Probable bifunctional riboflavin biosynthesis protein RibG : diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific deaminase) + 5-amino-6-(5-phosphoribosylamino) uracil reductase (HTP reductase) no data 40 86
o Desulfovibrio vulgaris Hildenborough JW710 DVU1201 ribD riboflavin biosynthesis protein RibD (TIGR) no data 37 85
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09615 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 36 85
o Bacteroides ovatus ATCC 8483 BACOVA_03546 riboflavin biosynthesis protein RibD no data 35 83
o Phocaeicola dorei CL03T12C01 ABI39_RS07065 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 35 89
o Bacteroides thetaiotaomicron VPI-5482 BT3728 riboflavin biosynthesis protein ribD (NCBI ptt file) no data 36 83
o Bosea sp. OAE506 ABIE41_RS19760 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 36 87
o Bacteroides stercoris CC31F HMPREF1181_RS03385 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 34 86
o Desulfovibrio vulgaris Miyazaki F DvMF_3095 riboflavin biosynthesis protein RibD (RefSeq) no data 39 60
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS15390 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD no data 44 43
  Pseudomonas fluorescens SBW25 PFLU_RS30655 DeoR family transcriptional regulator insig. 49 35