| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_3177 | | Recombination protein MgsA | 1.0 | Psyr_4197 | | DNA replication and repair protein RecN | 0.31 | 15 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_3177 | | Recombination protein MgsA | 1.00 | Psyr_4197 | | DNA replication and repair protein RecN | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.92 | AO356_22185 | | recombination factor protein RarA | 0.85 | AO356_07510 | | DNA repair protein RecN | 0.40 | 15 |
| Pseudomonas sp. RS175 | 0.92 | PFR28_02606 | | Replication-associated recombination protein A | 0.85 | PFR28_00071 | | DNA repair protein RecN | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.92 | Pf1N1B4_4062 | | FIG065221: Holliday junction DNA helicase | 0.89 | Pf1N1B4_1178 | | DNA repair protein RecN | 0.21 | 60 |
| Pseudomonas fluorescens FW300-N2E2 | 0.92 | Pf6N2E2_299 | | FIG065221: Holliday junction DNA helicase | 0.88 | Pf6N2E2_3370 | | DNA repair protein RecN | low | > 103 |
| Pseudomonas putida KT2440 | 0.91 | PP_4002 | | DNA-dependent ATPase required for recombination | 0.80 | PP_4729 | | factor used in recombination and DNA repair | low | > 96 |
| Pseudomonas fluorescens FW300-N2E3 | 0.90 | AO353_27640 | | recombination factor protein RarA | 0.88 | AO353_05660 | | DNA repair protein RecN | low | > 101 |
| Pseudomonas fluorescens SBW25-INTG | 0.90 | PFLU_RS18520 | | replication-associated recombination protein A | 0.88 | PFLU_RS25910 | | DNA repair protein RecN | 0.19 | 37 |
| Pseudomonas fluorescens GW456-L13 | 0.90 | PfGW456L13_2653 | | FIG065221: Holliday junction DNA helicase | 0.89 | PfGW456L13_5106 | | DNA repair protein RecN | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.90 | PFLU_RS18520 | | replication-associated recombination protein A | 0.88 | PFLU_RS25910 | | DNA repair protein RecN | 0.42 | 78 |
| Pseudomonas simiae WCS417 | 0.90 | PS417_16480 | | recombination factor protein RarA | 0.88 | PS417_24070 | | recombination and repair protein | 0.18 | 64 |
| Pseudomonas sp. S08-1 | 0.89 | OH686_00270 | | Replication-associated recombination protein RarA | 0.81 | OH686_17050 | | DNA repair protein RecN | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.87 | Psest_2034 | | ATPase related to the helicase subunit of the Holliday junction resolvase | 0.77 | Psest_0962 | | DNA repair protein RecN | 0.15 | 37 |
| Kangiella aquimarina DSM 16071 | 0.67 | B158DRAFT_1819 | | ATPase related to the helicase subunit of the Holliday junction resolvase | 0.41 | B158DRAFT_0601 | | DNA replication and repair protein RecN | low | > 40 |
| Marinobacter adhaerens HP15 | 0.63 | HP15_1817 | | recombination factor protein RarA | 0.50 | HP15_3084 | | DNA repair protein RecN | low | > 73 |
| Klebsiella michiganensis M5al | 0.60 | BWI76_RS09670 | | recombination factor protein RarA | 0.41 | BWI76_RS21560 | | DNA repair protein RecN | low | > 92 |
| Shewanella sp. ANA-3 | 0.59 | Shewana3_2052 | | recombination factor protein RarA (RefSeq) | 0.43 | Shewana3_1104 | | recombination and repair protein (RefSeq) | low | > 73 |
| Enterobacter sp. TBS_079 | 0.59 | MPMX20_01554 | | Replication-associated recombination protein A | 0.39 | MPMX20_03486 | | DNA repair protein RecN | low | > 85 |
| Enterobacter asburiae PDN3 | 0.59 | EX28DRAFT_2040 | | ATPase related to the helicase subunit of the Holliday junction resolvase | 0.39 | EX28DRAFT_2719 | | DNA repair protein RecN | low | > 76 |
| Shewanella loihica PV-4 | 0.59 | Shew_2022 | | recombination factor protein RarA (RefSeq) | 0.43 | Shew_1196 | | recombination and repair protein (RefSeq) | low | > 60 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.59 | GFF4896 | | FIG065221: Holliday junction DNA helicase | 0.40 | GFF4162 | | DNA repair protein RecN | low | > 78 |
| Rahnella sp. WP5 | 0.59 | EX31_RS18515 | | replication-associated recombination protein A | 0.41 | EX31_RS21760 | | DNA repair protein RecN | low | > 89 |
| Vibrio cholerae E7946 ATCC 55056 | 0.59 | CSW01_05630 | | replication-associated recombination protein A | 0.43 | CSW01_04395 | | DNA repair protein RecN | low | > 62 |
| Dickeya dianthicola ME23 | 0.59 | DZA65_RS09930 | | replication-associated recombination protein A | 0.41 | DZA65_RS04235 | | DNA repair protein RecN | low | > 75 |
| Dickeya dianthicola 67-19 | 0.59 | HGI48_RS09620 | | replication-associated recombination protein A | 0.40 | HGI48_RS04320 | | DNA repair protein RecN | low | > 71 |
| Dickeya dadantii 3937 | 0.59 | DDA3937_RS09605 | | replication-associated recombination protein A | 0.42 | DDA3937_RS04325 | | DNA repair protein RecN | low | > 74 |
| Shewanella oneidensis MR-1 | 0.59 | SO2308 | | ATPase, AAA family (NCBI ptt file) | 0.43 | SO3462 | recN | DNA repair protein RecN (NCBI ptt file) | 0.23 | 16 |
| Shewanella amazonensis SB2B | 0.58 | Sama_1774 | | recombination factor protein RarA (RefSeq) | 0.44 | Sama_1026 | | recombination and repair protein (RefSeq) | low | > 62 |
| Cupriavidus basilensis FW507-4G11 | 0.58 | RR42_RS04355 | | recombination factor protein RarA | 0.34 | RR42_RS05910 | | DNA repair protein | low | > 128 |
| Escherichia coli ECRC99 | 0.58 | KEDOAH_22175 | rarA | replication-associated recombination protein RarA | 0.40 | KEDOAH_07075 | recN | DNA repair protein RecN | — | — |
| Escherichia coli ECRC100 | 0.58 | OKFHMN_05560 | rarA | replication-associated recombination protein RarA | 0.40 | OKFHMN_21145 | recN | DNA repair protein RecN | low | > 80 |
| Escherichia coli ECOR38 | 0.58 | HEPCGN_22950 | rarA | replication-associated recombination protein RarA | 0.40 | HEPCGN_20265 | recN | DNA repair protein RecN | low | > 87 |
| Escherichia fergusonii Becca | 0.58 | EFB2_03169 | | Replication-associated recombination protein A | 0.40 | EFB2_01277 | | DNA repair protein RecN | low | > 86 |
| Escherichia coli ECRC98 | 0.58 | JDDGAC_09370 | rarA | replication-associated recombination protein RarA | 0.40 | JDDGAC_24810 | recN | DNA repair protein RecN | low | > 86 |
| Escherichia coli Nissle 1917 | 0.58 | ECOLIN_RS04745 | | replication-associated recombination protein RarA | 0.40 | ECOLIN_RS14775 | | DNA repair protein RecN | low | > 55 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.58 | OHPLBJKB_02776 | | Replication-associated recombination protein A | 0.40 | OHPLBJKB_01091 | | DNA repair protein RecN | low | > 73 |
| Escherichia coli ECOR27 | 0.58 | NOLOHH_22130 | rarA | replication-associated recombination protein RarA | 0.40 | NOLOHH_12815 | recN | DNA repair protein RecN | low | > 75 |
| Escherichia coli ECRC101 | 0.58 | MCAODC_24950 | rarA | replication-associated recombination protein RarA | 0.40 | MCAODC_11670 | recN | DNA repair protein RecN | 0.68 | 1 |
| Escherichia coli BL21 | 0.58 | ECD_00896 | | recombination intermediate processing DNA-dependent ATPase | 0.40 | ECD_02504 | | recombination and repair protein | low | > 61 |
| Escherichia coli ECRC102 | 0.58 | NIAGMN_03280 | rarA | replication-associated recombination protein RarA | 0.40 | NIAGMN_18915 | recN | DNA repair protein RecN | — | — |
| Escherichia coli BW25113 | 0.58 | b0892 | ycaJ | recombination protein (NCBI) | 0.40 | b2616 | recN | recombination and repair protein (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.58 | BNILDI_20385 | rarA | replication-associated recombination protein RarA | 0.40 | BNILDI_11620 | recN | DNA repair protein RecN | low | > 75 |
| Serratia liquefaciens MT49 | 0.58 | IAI46_08570 | | replication-associated recombination protein A | 0.43 | IAI46_19635 | | DNA repair protein RecN | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.58 | LU632_RS09755 | | replication-associated recombination protein A | 0.38 | LU632_RS16985 | recN | DNA repair protein RecN | low | > 74 |
| Pantoea sp. MT58 | 0.58 | IAI47_12900 | | replication-associated recombination protein A | 0.41 | IAI47_04810 | | DNA repair protein RecN | low | > 76 |
| Paraburkholderia graminis OAS925 | 0.58 | ABIE53_001292 | | putative ATPase | 0.32 | ABIE53_000856 | | DNA repair protein RecN (Recombination protein N) | 0.38 | 10 |
| Pectobacterium carotovorum WPP14 | 0.58 | HER17_RS12345 | | replication-associated recombination protein A | 0.40 | HER17_RS17420 | | DNA repair protein RecN | low | > 75 |
| Paraburkholderia sabiae LMG 24235 | 0.57 | QEN71_RS03415 | | replication-associated recombination protein A | 0.34 | QEN71_RS26535 | | DNA repair protein RecN | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.57 | BPHYT_RS05100 | | ATPase AAA | 0.32 | BPHYT_RS03560 | | DNA repair protein | low | > 109 |
| Ralstonia solanacearum PSI07 | 0.57 | RPSI07_RS13205 | | replication-associated recombination protein A | 0.35 | RPSI07_RS11890 | | DNA repair protein RecN | low | > 81 |
| Ralstonia sp. UNC404CL21Col | 0.57 | ABZR87_RS16030 | | replication-associated recombination protein A | 0.35 | ABZR87_RS01065 | | DNA repair protein RecN | low | > 80 |
| Ralstonia solanacearum UW163 | 0.57 | UW163_RS09525 | | replication-associated recombination protein A | 0.35 | UW163_RS08210 | | DNA repair protein RecN | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.57 | RALBFv3_RS04145 | | replication-associated recombination protein A | 0.35 | RALBFv3_RS05415 | | DNA repair protein RecN | low | > 76 |
| Herbaspirillum seropedicae SmR1 | 0.57 | HSERO_RS09515 | | ATPase AAA | 0.38 | HSERO_RS03060 | | DNA repair protein | low | > 78 |
| Ralstonia solanacearum GMI1000 | 0.56 | RS_RS11735 | | replication-associated recombination protein A | 0.35 | RS_RS13275 | | DNA repair protein RecN | low | > 80 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.56 | H281DRAFT_00180 | | Recombination protein MgsA | 0.33 | H281DRAFT_04692 | | DNA replication and repair protein RecN | low | > 103 |
| Dechlorosoma suillum PS | 0.56 | Dsui_1694 | | AAA ATPase | 0.35 | Dsui_3072 | | DNA repair protein RecN | low | > 51 |
| Castellaniella sp019104865 MT123 | 0.56 | ABCV34_RS07220 | | replication-associated recombination protein A | 0.33 | ABCV34_RS07470 | | DNA repair protein RecN | low | > 48 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.54 | Xcc-8004.2744.1 | | FIG065221: Holliday junction DNA helicase | 0.39 | Xcc-8004.3431.1 | | DNA repair protein RecN | low | > 74 |
| Alteromonas macleodii MIT1002 | 0.54 | MIT1002_02178 | | Replication-associated recombination protein A | 0.40 | MIT1002_01443 | | Recombination protein N | low | > 70 |
| Variovorax sp. SCN45 | 0.54 | GFF6034 | | Replication-associated recombination protein RarA | 0.33 | GFF2357 | | DNA repair protein RecN | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.53 | Ac3H11_1696 | | FIG065221: Holliday junction DNA helicase | 0.35 | Ac3H11_3460 | | DNA repair protein RecN | low | > 79 |
| Rhodanobacter denitrificans FW104-10B01 | 0.53 | LRK54_RS17320 | | replication-associated recombination protein A | 0.37 | LRK54_RS17960 | | DNA repair protein RecN | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.53 | OKGIIK_07580 | rarA | recombination factor protein RarA | 0.39 | OKGIIK_07340 | recN | DNA repair protein RecN | low | > 52 |
| Dyella japonica UNC79MFTsu3.2 | 0.53 | ABZR86_RS01825 | | replication-associated recombination protein A | 0.38 | ABZR86_RS05665 | | DNA repair protein RecN | 0.77 | 19 |
| Rhodanobacter denitrificans MT42 | 0.52 | LRK55_RS17545 | | replication-associated recombination protein A | 0.37 | LRK55_RS17815 | | DNA repair protein RecN | low | > 63 |
| Lysobacter sp. OAE881 | 0.52 | ABIE51_RS11445 | | replication-associated recombination protein A | 0.37 | ABIE51_RS11655 | | DNA repair protein RecN | 0.65 | 13 |
| Sinorhizobium meliloti 1021 | 0.48 | SMc01279 | | recombination factor protein RarA | 0.30 | SMc01877 | | DNA repair protein | low | > 103 |
| Azospirillum brasilense Sp245 | 0.48 | AZOBR_RS06885 | | ATPase AAA | 0.27 | AZOBR_RS12395 | | DNA repair protein RecN | — | — |
| Agrobacterium fabrum C58 | 0.47 | Atu1914 | | ATPase, AAA family protein | 0.29 | Atu2083 | | DNA repair protein RecN | low | > 89 |
| Azospirillum sp. SherDot2 | 0.47 | MPMX19_01528 | | Replication-associated recombination protein A | 0.28 | MPMX19_01601 | | DNA repair protein RecN | low | > 112 |
| Phaeobacter inhibens DSM 17395 | 0.47 | PGA1_c01930 | | replication-associated recombination protein A | 0.26 | PGA1_c09720 | | DNA repair protein RecN | low | > 62 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.47 | A4249_RS07890 | | replication-associated recombination protein A | 0.22 | A4249_RS02620 | | DNA repair protein RecN | low | > 48 |
| Rhodopseudomonas palustris CGA009 | 0.47 | TX73_016655 | | replication-associated recombination protein A | 0.27 | TX73_018240 | | DNA repair protein RecN | low | > 86 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.46 | GFF777 | | FIG065221: Holliday junction DNA helicase | 0.32 | GFF829 | | DNA repair protein RecN | low | > 90 |
| Rhodospirillum rubrum S1H | 0.46 | Rru_A2660 | | AAA ATPase, central region (NCBI) | 0.25 | Rru_A0940 | | DNA repair protein RecN (NCBI) | — | — |
| Dinoroseobacter shibae DFL-12 | 0.46 | Dshi_0313 | | AAA ATPase central domain protein (RefSeq) | 0.25 | Dshi_2413 | | DNA repair protein RecN (RefSeq) | low | > 64 |
| Magnetospirillum magneticum AMB-1 | 0.45 | AMB_RS17620 | | replication-associated recombination protein A | 0.29 | AMB_RS19520 | | DNA repair protein RecN | — | — |
| Bosea sp. OAE506 | 0.45 | ABIE41_RS14690 | | replication-associated recombination protein A | 0.27 | ABIE41_RS12645 | | DNA repair protein RecN | low | > 77 |
| Caulobacter crescentus NA1000 | 0.44 | CCNA_01342 | | ATPase, AAA family | 0.23 | CCNA_02062 | | DNA repair protein recN | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.44 | CCNA_01342 | | ATPase, AAA family | 0.23 | CCNA_02062 | | DNA repair protein recN | low | > 67 |
| Bacteroides ovatus ATCC 8483 | 0.42 | BACOVA_03971 | | ATPase, AAA family | 0.29 | BACOVA_00200 | | DNA repair protein RecN | low | > 94 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.42 | CA265_RS22400 | | AAA family ATPase | 0.26 | CA265_RS14855 | | DNA repair protein RecN | low | > 88 |
| Parabacteroides merdae CL09T00C40 | 0.42 | HMPREF1078_RS15395 | | replication-associated recombination protein A | 0.28 | HMPREF1078_RS02000 | | DNA repair protein RecN | low | > 61 |
| Bacteroides stercoris CC31F | 0.42 | HMPREF1181_RS16975 | | replication-associated recombination protein A | 0.29 | HMPREF1181_RS10900 | | DNA repair protein RecN | low | > 56 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.41 | CA264_02215 | | AAA family ATPase | 0.27 | CA264_13235 | | DNA repair protein RecN | low | > 74 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.41 | BT1205 | | putative ATPase, AAA family (NCBI ptt file) | 0.29 | BT1361 | | DNA repair protein recN (Recombination protein N) (NCBI ptt file) | low | > 81 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.40 | ABZR88_RS20285 | | replication-associated recombination protein A | 0.27 | ABZR88_RS06580 | | DNA repair protein RecN | low | > 71 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.40 | Echvi_4603 | | ATPase related to the helicase subunit of the Holliday junction resolvase | 0.27 | Echvi_2067 | | DNA repair protein RecN | low | > 79 |
| Phocaeicola dorei CL03T12C01 | 0.40 | ABI39_RS20200 | | replication-associated recombination protein A | 0.27 | ABI39_RS14500 | | DNA repair protein RecN | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.40 | HMPREF1058_RS06440 | | replication-associated recombination protein A | 0.27 | HMPREF1058_RS18225 | | DNA repair protein RecN | low | > 67 |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_02987 | | Replication-associated recombination protein A | 0.31 | MPMX26_00239 | | DNA repair protein RecN | low | > 36 |
| Bifidobacterium breve UCC2003 | 0.36 | BBR_RS17330 | | replication-associated recombination protein A | 0.14 | BBR_RS14030 | | DNA repair protein RecN | low | > 34 |
| Mycobacterium tuberculosis H37Rv | 0.35 | Rv2559c | | Conserved hypothetical alanine leucine valine rich protein | 0.19 | Rv1696 | | Probable DNA repair protein RecN (recombination protein N) | low | > 58 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.33 | DVU1686 | | ATPase, AAA family (TIGR) | 0.19 | DVU2463 | recN | DNA repair protein RecN (TIGR) | low | > 55 |
| Fusobacterium nucleatum SB010 | 0.33 | HUW76_02735 | | replication-associated recombination protein A | 0.24 | HUW76_08055 | | DNA repair protein RecN | low | > 35 |
| Desulfovibrio vulgaris Miyazaki F | 0.32 | DvMF_0339 | | recombination factor protein RarA (RefSeq) | 0.17 | DvMF_0923 | | SMC domain protein (RefSeq) | low | > 51 |
Not shown: 2 genomes with orthologs for Psyr_3177 only; 2 genomes with orthologs for Psyr_4197 only