Conservation of cofitness between Psyr_4369 and Psyr_1669 in Pseudomonas syringae pv. syringae B728a

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4369 glutamate-5-semialdehyde dehydrogenase 1.0 Psyr_1669 O-succinylhomoserine sulfhydrylase 0.91 7
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4369 glutamate-5-semialdehyde dehydrogenase 1.00 Psyr_1669 O-succinylhomoserine sulfhydrylase 0.92 11
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_06495 gamma-glutamyl phosphate reductase 0.93 AO353_20695 O-succinylhomoserine sulfhydrylase 0.65 34
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_15290 gamma-glutamyl phosphate reductase 0.92 AO356_21470 O-succinylhomoserine sulfhydrylase low > 104
Pseudomonas sp. RS175 0.87 PFR28_03872 Gamma-glutamyl phosphate reductase 0.92 PFR28_02810 O-succinylhomoserine sulfhydrylase — —
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_2688 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.36 Pf1N1B4_4890 Cystathionine gamma-lyase (EC 4.4.1.1) 0.18 81
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_4993 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.91 Pf6N2E2_77 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) low > 103
Pseudomonas putida KT2440 0.85 PP_4811 Gamma-glutamyl phosphate reductase 0.86 PP_2001 O-succinylhomoserine sulfhydrylase low > 96
Pseudomonas fluorescens GW456-L13 0.85 PfGW456L13_1356 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.92 PfGW456L13_3934 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) low > 87
Pseudomonas fluorescens SBW25 0.75 PFLU_RS26675 glutamate-5-semialdehyde dehydrogenase 0.93 PFLU_RS20510 O-succinylhomoserine sulfhydrylase — —
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS26675 glutamate-5-semialdehyde dehydrogenase 0.93 PFLU_RS20510 O-succinylhomoserine sulfhydrylase — —
Pseudomonas simiae WCS417 0.75 PS417_24745 gamma-glutamyl phosphate reductase 0.93 PS417_18530 O-succinylhomoserine sulfhydrylase 0.64 19
Pseudomonas stutzeri RCH2 0.73 Psest_0508 gamma-glutamyl phosphate reductase 0.84 Psest_2578 O-succinylhomoserine sulfhydrylase 0.82 9
Pseudomonas sp. S08-1 0.72 OH686_09340 Gamma-glutamyl phosphate reductase 0.82 OH686_04415 O-succinylhomoserine sulfhydrylase low > 80
Marinobacter adhaerens HP15 0.70 HP15_601 gamma-glutamyl phosphate reductase 0.61 HP15_1820 methionine gamma-lyase — —
Acinetobacter radioresistens SK82 0.67 MPMX26_00417 Gamma-glutamyl phosphate reductase 0.66 MPMX26_01645 O-succinylhomoserine sulfhydrylase 0.71 34
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS01395 glutamate-5-semialdehyde dehydrogenase 0.36 ABZR87_RS13810 O-acetylhomoserine aminocarboxypropyltransferase low > 80
Dechlorosoma suillum PS 0.60 Dsui_1220 gamma-glutamyl phosphate reductase 0.57 Dsui_3185 O-succinylhomoserine sulfhydrylase — —
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS26940 glutamate-5-semialdehyde dehydrogenase 0.53 QEN71_RS17685 O-succinylhomoserine sulfhydrylase low > 153
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS05825 glutamate-5-semialdehyde dehydrogenase 0.35 RALBFv3_RS01870 O-acetylhomoserine aminocarboxypropyltransferase low > 76
Ralstonia solanacearum PSI07 0.60 RPSI07_RS11475 glutamate-5-semialdehyde dehydrogenase 0.35 RPSI07_RS15620 O-acetylhomoserine aminocarboxypropyltransferase low > 81
Ralstonia solanacearum UW163 0.60 UW163_RS07800 glutamate-5-semialdehyde dehydrogenase 0.35 UW163_RS15180 O-acetylhomoserine aminocarboxypropyltransferase — —
Ralstonia solanacearum GMI1000 0.59 RS_RS13715 gamma-glutamyl-phosphate reductase 0.35 RS_RS07865 O-acetylhomoserine aminocarboxypropyltransferase — —
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS02965 gamma-glutamyl phosphate reductase 0.31 HSERO_RS18310 O-acetylhomoserine aminocarboxypropyltransferase low > 78
Castellaniella sp019104865 MT123 0.58 ABCV34_RS00845 glutamate-5-semialdehyde dehydrogenase 0.35 ABCV34_RS10165 bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase — —
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS16770 gamma-glutamyl phosphate reductase 0.53 BPHYT_RS33835 O-succinylhomoserine sulfhydrylase — —
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_06324 glutamate-5-semialdehyde dehydrogenase 0.54 H281DRAFT_06059 O-succinylhomoserine sulfhydrylase low > 103
Acidovorax sp. GW101-3H11 0.57 Ac3H11_704 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.33 Ac3H11_34 Methionine gamma-lyase (EC 4.4.1.11) low > 79
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS17530 gamma-glutamyl phosphate reductase 0.54 RR42_RS14320 O-succinylhomoserine sulfhydrylase low > 128
Variovorax sp. SCN45 0.56 GFF6326 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.53 GFF3088 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) @ O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF2641 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.52 GFF301 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) low > 90
Paraburkholderia graminis OAS925 0.55 ABIE53_003523 glutamate-5-semialdehyde dehydrogenase 0.54 ABIE53_004817 O-succinylhomoserine sulfhydrylase low > 113
Variovorax sp. OAS795 0.54 ABID97_RS04600 glutamate-5-semialdehyde dehydrogenase 0.54 ABID97_RS21630 O-succinylhomoserine sulfhydrylase — —
Magnetospirillum magneticum AMB-1 0.50 AMB_RS20640 glutamate-5-semialdehyde dehydrogenase 0.47 AMB_RS21365 O-succinylhomoserine sulfhydrylase — —
Rhodospirillum rubrum S1H 0.49 Rru_A1238 Gamma-glutamyl phosphate reductase GPR (NCBI) 0.43 Rru_A3214 O-succinylhomoserine sulfhydrylase (NCBI) — —
Azospirillum sp. SherDot2 0.48 MPMX19_01943 Gamma-glutamyl phosphate reductase 0.40 MPMX19_01364 O-succinylhomoserine sulfhydrylase — —
Agrobacterium fabrum C58 0.48 Atu2779 gamma-glutamyl phosphate reductase 0.43 Atu0432 O-succinylhomoserine sulfhydrylase — —
Sinorhizobium meliloti 1021 0.48 SMc03777 gamma-glutamyl phosphate reductase 0.41 SMc02217 O-succinylhomoserine sulfhydrylase 0.93 8
Azospirillum brasilense Sp245 0.46 AZOBR_RS04075 gamma-glutamyl phosphate reductase 0.42 AZOBR_RS02140 O-succinylhomoserine sulfhydrylase — —
Rhizobium sp. OAE497 0.46 ABIE40_RS18925 glutamate-5-semialdehyde dehydrogenase 0.41 ABIE40_RS02340 O-succinylhomoserine sulfhydrylase 0.93 9
Dinoroseobacter shibae DFL-12 0.46 Dshi_1469 gamma-glutamyl phosphate reductase (RefSeq) 0.46 Dshi_2410 O-succinylhomoserine sulfhydrylase (RefSeq) — —
Sphingomonas koreensis DSMZ 15582 0.46 Ga0059261_2506 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) 0.42 Ga0059261_3194 O-acetylhomoserine sulfhydrylase (EC:2.5.1.49) (from data) 0.88 55
Rhodopseudomonas palustris CGA009 0.45 TX73_000855 glutamate-5-semialdehyde dehydrogenase 0.43 TX73_024775 O-succinylhomoserine sulfhydrylase — —
Caulobacter crescentus NA1000 0.45 CCNA_03543 gamma-glutamyl phosphate reductase 0.42 CCNA_02321 O-succinylhomoserine sulfhydrylase 0.93 4
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_03543 gamma-glutamyl phosphate reductase 0.42 CCNA_02321 O-succinylhomoserine sulfhydrylase low > 67
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS02370 glutamate-5-semialdehyde dehydrogenase 0.36 LRK54_RS05660 PLP-dependent aspartate aminotransferase family protein low > 59
Rhodanobacter denitrificans MT42 0.44 LRK55_RS02125 glutamate-5-semialdehyde dehydrogenase 0.36 LRK55_RS05410 cystathionine gamma-synthase low > 63
Alteromonas macleodii MIT1002 0.44 MIT1002_01885 Gamma-glutamyl phosphate reductase 0.25 MIT1002_02266 Methionine gamma-lyase 0.99 1
Lysobacter sp. OAE881 0.44 ABIE51_RS13365 glutamate-5-semialdehyde dehydrogenase 0.39 ABIE51_RS04295 cystathionine gamma-synthase low > 62
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS08680 glutamate-5-semialdehyde dehydrogenase 0.38 ABZR86_RS18745 PLP-dependent aspartate aminotransferase family protein — —
Phaeobacter inhibens DSM 17395 0.44 PGA1_c15520 gamma-glutamyl phosphate reductase ProA 0.43 PGA1_c23540 O-succinylhomoserine sulfhydrylase MetZ 0.78 26
Escherichia coli Nissle 1917 0.44 ECOLIN_RS01830 glutamate-5-semialdehyde dehydrogenase 0.30 ECOLIN_RS22725 cystathionine gamma-synthase 0.93 12
Klebsiella michiganensis M5al 0.44 BWI76_RS05835 gamma-glutamyl-phosphate reductase 0.31 BWI76_RS24210 cystathionine gamma-lyase low > 92
Escherichia coli ECOR38 0.43 HEPCGN_07775 proA glutamate-5-semialdehyde dehydrogenase 0.29 HEPCGN_12345 metB cystathionine gamma-synthase 0.84 65
Escherichia coli ECRC102 0.43 NIAGMN_07530 proA glutamate-5-semialdehyde dehydrogenase 0.30 NIAGMN_11430 metB cystathionine gamma-synthase — —
Escherichia coli ECOR27 0.43 NOLOHH_02045 proA glutamate-5-semialdehyde dehydrogenase 0.30 NOLOHH_05820 metB cystathionine gamma-synthase 0.96 25
Escherichia coli ECRC100 0.43 OKFHMN_09670 proA glutamate-5-semialdehyde dehydrogenase 0.30 OKFHMN_13675 metB cystathionine gamma-synthase 0.96 31
Escherichia coli BL21 0.43 ECD_00240 gamma-glutamylphosphate reductase 0.29 ECD_03825 cystathionine gamma-synthase, PLP-dependent 0.88 22
Escherichia coli ECRC101 0.43 MCAODC_00190 proA glutamate-5-semialdehyde dehydrogenase 0.30 MCAODC_04175 metB cystathionine gamma-synthase 0.87 40
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_03397 Gamma-glutamyl phosphate reductase 0.30 OHPLBJKB_04111 Cystathionine gamma-synthase low > 73
Escherichia coli ECRC99 0.43 KEDOAH_18485 proA glutamate-5-semialdehyde dehydrogenase 0.30 KEDOAH_14485 metB cystathionine gamma-synthase — —
Escherichia coli ECRC62 0.43 BNILDI_00240 proA glutamate-5-semialdehyde dehydrogenase 0.30 BNILDI_05715 metB cystathionine gamma-synthase 0.98 14
Escherichia coli ECRC98 0.43 JDDGAC_13295 proA glutamate-5-semialdehyde dehydrogenase 0.30 JDDGAC_17300 metB cystathionine gamma-synthase 0.87 31
Escherichia coli BW25113 0.43 b0243 proA gamma-glutamyl phosphate reductase (NCBI) 0.30 b3939 metB cystathionine gamma-synthase (NCBI) 0.89 39
Escherichia fergusonii Becca 0.43 EFB2_03777 Gamma-glutamyl phosphate reductase 0.30 EFB2_04679 Cystathionine gamma-synthase low > 86
Enterobacter sp. TBS_079 0.43 MPMX20_00928 Gamma-glutamyl phosphate reductase 0.30 MPMX20_04531 Cystathionine gamma-synthase 0.93 17
Enterobacter asburiae PDN3 0.43 EX28DRAFT_2650 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) 0.29 EX28DRAFT_4411 cystathionine gamma-synthase (EC 2.5.1.48) 0.80 29
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF4115 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.30 GFF2323 Cystathionine gamma-synthase (EC 2.5.1.48) low > 78
Shewanella sp. ANA-3 0.43 Shewana3_4057 glutamate-5-semialdehyde dehydrogenase (RefSeq) 0.40 Shewana3_2643 methionine gamma-lyase (RefSeq) low > 73
Dickeya dadantii 3937 0.43 DDA3937_RS16530 glutamate-5-semialdehyde dehydrogenase 0.30 DDA3937_RS00950 cystathionine gamma-synthase 0.71 43
Shewanella loihica PV-4 0.43 Shew_3015 gamma-glutamyl phosphate reductase (RefSeq) 0.37 Shew_2491 methionine gamma-lyase (RefSeq) low > 60
Rahnella sp. WP5 0.43 EX31_RS20975 glutamate-5-semialdehyde dehydrogenase 0.36 EX31_RS04985 PLP-dependent transferase low > 89
Dickeya dianthicola ME23 0.42 DZA65_RS17690 glutamate-5-semialdehyde dehydrogenase 0.32 DZA65_RS16970 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase low > 75
Serratia liquefaciens MT49 0.42 IAI46_04435 glutamate-5-semialdehyde dehydrogenase 0.40 IAI46_03630 methionine gamma-lyase low > 86
Pantoea sp. MT58 0.41 IAI47_15115 glutamate-5-semialdehyde dehydrogenase 0.29 IAI47_00880 cystathionine gamma-synthase 0.92 17
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_1470 glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41) 0.40 B158DRAFT_1522 methionine gamma-lyase low > 40
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_09415 proA glutamate-5-semialdehyde dehydrogenase 0.37 OKGIIK_01180 metC cystathionine beta-lyase low > 52
Xanthomonas campestris pv. campestris strain 8004 0.41 Xcc-8004.2327.1 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.37 Xcc-8004.4517.1 Cystathionine gamma-lyase (EC 4.4.1.1) low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS16120 glutamate-5-semialdehyde dehydrogenase 0.36 A4249_RS08315 cystathionine gamma-synthase low > 48
Erwinia tracheiphila SCR3 0.40 LU632_RS01190 proA glutamate-5-semialdehyde dehydrogenase 0.29 LU632_RS19640 metB cystathionine gamma-synthase 0.78 20
Bosea sp. OAE506 0.40 ABIE41_RS07580 glutamate-5-semialdehyde dehydrogenase 0.43 ABIE41_RS03970 O-succinylhomoserine sulfhydrylase — —
Mycobacterium tuberculosis H37Rv 0.40 Rv2427c Probable gamma-glutamyl phosphate reductase protein ProA (GPR) (glutamate-5-semialdehyde dehydrogenase) (glutamyl-gamma-semialdehyde dehydrogenase) 0.41 Rv0391 Probable O-succinylhomoserine sulfhydrylase MetZ (OSH sulfhydrylase) low > 58
Bifidobacterium breve UCC2003 0.40 BBR_RS14075 glutamate-5-semialdehyde dehydrogenase 0.33 BBR_RS14595 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase low > 34
Dickeya dianthicola 67-19 0.40 HGI48_RS16600 glutamate-5-semialdehyde dehydrogenase 0.32 HGI48_RS15890 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase low > 71
Pectobacterium carotovorum WPP14 0.40 HER17_RS04705 glutamate-5-semialdehyde dehydrogenase 0.32 HER17_RS07405 PLP-dependent aspartate aminotransferase family protein low > 75
Shewanella oneidensis MR-1 0.39 SO1122 proA gamma-glutamyl phosphate reductase (NCBI ptt file) 0.40 SO1812 mdeA Methionine gamma-lyase (EC 4.4.1.11) (from data) low > 76
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_11570 glutamate-5-semialdehyde dehydrogenase 0.29 CSW01_13550 O-succinylhomoserine (thiol)-lyase low > 62
Shewanella amazonensis SB2B 0.37 Sama_2515 proA gamma-glutamyl phosphate reductase (RefSeq) 0.37 Sama_1242 methionine gamma-lyase (RefSeq) low > 62
Synechococcus elongatus PCC 7942 0.36 Synpcc7942_2265 proA glutamate-5-semialdehyde dehydrogenase 0.34 Synpcc7942_0370 metY O-acetylhomoserine/O-acetylserine sulfhydrylase — —
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS03320 glutamate-5-semialdehyde dehydrogenase 0.37 HMPREF1181_RS05290 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase low > 56
Parabacteroides merdae CL09T00C40 0.35 HMPREF1078_RS10655 glutamate-5-semialdehyde dehydrogenase 0.33 HMPREF1078_RS07330 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase low > 61
Pontibacter actiniarum KMM 6156, DSM 19842 0.35 CA264_07720 gamma-glutamyl-phosphate reductase 0.44 CA264_02530 O-succinylhomoserine sulfhydrylase low > 74
Bacteroides thetaiotaomicron VPI-5482 0.34 BT3718 gamma-glutamyl phosphate reductase (NCBI ptt file) 0.37 BT2387 O-acetylhomoserine (thiol)-lyase (NCBI ptt file) low > 81
Pedobacter sp. GW460-11-11-14-LB5 0.34 CA265_RS20850 glutamate-5-semialdehyde dehydrogenase 0.47 CA265_RS13080 O-succinylhomoserine sulfhydrylase 0.94 15
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS02875 glutamate-5-semialdehyde dehydrogenase 0.37 ABI39_RS13825 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase low > 72
Mucilaginibacter yixingensis YX-36 DSM 26809 0.33 ABZR88_RS22165 glutamate-5-semialdehyde dehydrogenase 0.32 ABZR88_RS06685 cystathionine gamma-synthase low > 71
Phocaeicola vulgatus CL09T03C04 0.33 HMPREF1058_RS08645 glutamate-5-semialdehyde dehydrogenase 0.36 HMPREF1058_RS17635 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase low > 67
Bacteroides ovatus ATCC 8483 0.32 BACOVA_03534 glutamate-5-semialdehyde dehydrogenase 0.37 BACOVA_03030 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase low > 94
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_2633 gamma-glutamylphosphate reductase (EC 1.2.1.41) (from data) 0.49 Echvi_2283 Cystathionine beta-lyases/cystathionine gamma-synthases 0.88 13

Not shown: 2 genomes with orthologs for Psyr_4369 only; 1 genomes with orthologs for Psyr_1669 only