Conservation of cofitness between PP_0290 and PP_3511 in Pseudomonas putida KT2440

94 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0290 Imidazole glycerol phosphate synthase subunit HisH 1.0 PP_3511 Branched-chain-amino-acid aminotransferase 0.87 10
Pseudomonas simiae WCS417 0.94 PS417_01565 imidazole glycerol phosphate synthase 0.87 PS417_17565 branched-chain amino acid aminotransferase 0.40 88
Pseudomonas fluorescens SBW25 0.93 PFLU_RS01610 imidazole glycerol phosphate synthase subunit HisH 0.87 PFLU_RS19375 branched-chain amino acid aminotransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.93 PFLU_RS01610 imidazole glycerol phosphate synthase subunit HisH 0.87 PFLU_RS19375 branched-chain amino acid aminotransferase low > 109
Pseudomonas sp. RS175 0.93 PFR28_04930 Imidazole glycerol phosphate synthase subunit HisH 0.85 PFR28_02449 putative branched-chain-amino-acid aminotransferase low > 88
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_12075 imidazole glycerol phosphate synthase subunit HisH 0.85 AO353_26655 branched-chain amino acid aminotransferase low > 101
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_1626 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) 0.86 Pf1N1B4_4476 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 87
Pseudomonas stutzeri RCH2 0.92 Psest_0153 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.11 Psest_0450 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 67
Pseudomonas sp. S08-1 0.92 OH686_14580 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.11 OH686_09695 branched-chain amino acid aminotransferase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_4896 imidazole glycerol phosphate synthase subunit hisH 0.83 Psyr_1148 branched chain amino acid aminotransferase apoenzyme low > 86
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_4896 imidazole glycerol phosphate synthase subunit hisH 0.83 Psyr_1148 branched chain amino acid aminotransferase apoenzyme 0.68 41
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_3841 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) 0.85 Pf6N2E2_477 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 103
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_09810 imidazole glycerol phosphate synthase subunit HisH 0.85 AO356_22970 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 104
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_361 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) 0.85 PfGW456L13_3544 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 87
Marinobacter adhaerens HP15 0.70 HP15_3011 imidazole glycerol phosphate synthase subunit HisH 0.11 HP15_436 branched-chain-amino-acid aminotransferase
Acinetobacter radioresistens SK82 0.54 MPMX26_02846 Imidazole glycerol phosphate synthase subunit HisH 0.10 MPMX26_00445 Branched-chain-amino-acid aminotransferase 0.90 21
Dechlorosoma suillum PS 0.48 Dsui_1416 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.14 Dsui_3339 branched-chain amino acid aminotransferase, group I
Variovorax sp. OAS795 0.47 ABID97_RS23135 imidazole glycerol phosphate synthase subunit HisH 0.13 ABID97_RS03790 branched-chain amino acid transaminase
Variovorax sp. SCN45 0.47 GFF5350 Imidazole glycerol phosphate synthase amidotransferase subunit HisH 0.12 GFF5079 Branched-chain amino acid aminotransferase (EC 2.6.1.42)
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS18895 imidazole glycerol phosphate synthase 0.33 RR42_RS25890 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data)
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS20325 IGP synthase, amidotransferase subunit (EC 4.3.2.10) (from data) 0.14 HSERO_RS03330 branched-chain amino acid aminotransferase low > 78
Ralstonia solanacearum GMI1000 0.45 RS_RS14770 imidazole glycerol phosphate synthase subunit HisH 0.29 RS_RS23675 branched-chain amino acid aminotransferase
Ralstonia solanacearum PSI07 0.45 RPSI07_RS10410 imidazole glycerol phosphate synthase subunit HisH 0.12 RPSI07_RS21175 branched-chain amino acid transaminase
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS02480 imidazole glycerol phosphate synthase subunit HisH 0.31 ABZR87_RS18540 branched-chain amino acid aminotransferase low > 80
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS06825 imidazole glycerol phosphate synthase subunit HisH 0.29 RALBFv3_RS16875 branched-chain amino acid aminotransferase
Ralstonia solanacearum UW163 0.44 UW163_RS06790 imidazole glycerol phosphate synthase subunit HisH 0.29 UW163_RS18230 branched-chain amino acid aminotransferase
Acidovorax sp. GW101-3H11 0.43 Ac3H11_4731 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) 0.11 Ac3H11_3369 Branched-chain amino acid aminotransferase (EC 2.6.1.42)
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS17690 imidazole glycerol phosphate synthase 0.14 BPHYT_RS16285 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 109
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS27845 imidazole glycerol phosphate synthase subunit HisH 0.15 QEN71_RS02410 branched-chain amino acid transaminase low > 153
Paraburkholderia graminis OAS925 0.42 ABIE53_003697 glutamine amidotransferase 0.14 ABIE53_003432 branched-chain amino acid aminotransferase
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_05657 imidazole glycerol phosphate synthase subunit hisH 0.14 H281DRAFT_04193 branched chain amino acid aminotransferase apoenzyme
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF1311 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) 0.11 GFF1835 Branched-chain amino acid aminotransferase (EC 2.6.1.42)
Castellaniella sp019104865 MT123 0.38 ABCV34_RS11240 imidazole glycerol phosphate synthase subunit HisH 0.11 ABCV34_RS07930 branched-chain amino acid transaminase low > 48
Desulfovibrio vulgaris Miyazaki F 0.36 DvMF_2305 hisH IGP synthase, amidotransferase subunit (EC 4.3.2.10) (from data) 0.14 DvMF_2268 branched-chain amino acid aminotransferase (RefSeq) low > 51
Synechococcus elongatus PCC 7942 0.36 Synpcc7942_1481 hisH imidazole glycerol phosphate synthase subunit HisH 0.12 Synpcc7942_1029 ilvE branched-chain amino acid aminotransferase
Bosea sp. OAE506 0.35 ABIE41_RS03955 imidazole glycerol phosphate synthase subunit HisH 0.10 ABIE41_RS11405 branched-chain amino acid aminotransferase low > 77
Desulfovibrio vulgaris Hildenborough JW710 0.35 DVU0285 hisH IGP synthase, amidotransferase subunit (EC 4.3.2.10) (from data) 0.14 DVU3197 ilvE branched-chain amino acid aminotransferase (TIGR) 0.90 16
Rhodopseudomonas palustris CGA009 0.34 TX73_001615 imidazole glycerol phosphate synthase subunit HisH 0.29 TX73_022650 branched-chain amino acid aminotransferase
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS06715 imidazole glycerol phosphate synthase subunit HisH 0.16 ABZR86_RS11580 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 74
Phaeobacter inhibens DSM 17395 0.34 PGA1_c09320 imidazole glycerol phosphate synthase subunit HisH 0.13 PGA1_c34110 branched-chain-amino-acid aminotransferase IlvE
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_05765 imidazole glycerol phosphate synthase subunit HisH 0.15 CSW01_00145 branched-chain-amino-acid transaminase low > 62
Brevundimonas sp. GW460-12-10-14-LB2 0.33 A4249_RS10705 imidazole glycerol phosphate synthase subunit HisH 0.10 A4249_RS09820 branched-chain amino acid aminotransferase
Pectobacterium carotovorum WPP14 0.32 HER17_RS12245 imidazole glycerol phosphate synthase subunit HisH 0.16 HER17_RS01070 branched-chain amino acid transaminase low > 75
Dickeya dadantii 3937 0.32 DDA3937_RS09720 imidazole glycerol phosphate synthase subunit HisH 0.16 DDA3937_RS20160 branched-chain-amino-acid transaminase 0.81 43
Bacteroides stercoris CC31F 0.32 HMPREF1181_RS11080 imidazole glycerol phosphate synthase subunit HisH 0.43 HMPREF1181_RS06865 branched-chain amino acid aminotransferase low > 56
Mucilaginibacter yixingensis YX-36 DSM 26809 0.32 ABZR88_RS06865 imidazole glycerol phosphate synthase subunit HisH 0.27 ABZR88_RS22095 branched-chain amino acid aminotransferase
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.2945.1 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) 0.33 Xcc-8004.4199.1 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.66 57
Serratia liquefaciens MT49 0.32 IAI46_08195 imidazole glycerol phosphate synthase subunit HisH 0.17 IAI46_24350 branched-chain-amino-acid transaminase low > 86
Phocaeicola vulgatus CL09T03C04 0.32 HMPREF1058_RS06165 imidazole glycerol phosphate synthase subunit HisH 0.43 HMPREF1058_RS02220 branched-chain amino acid aminotransferase 0.62 60
Shewanella sp. ANA-3 0.32 Shewana3_1850 hisH imidazole glycerol phosphate synthase subunit HisH (RefSeq) 0.27 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) 0.88 66
Phocaeicola dorei CL03T12C01 0.32 ABI39_RS19920 imidazole glycerol phosphate synthase subunit HisH 0.43 ABI39_RS01415 branched-chain amino acid aminotransferase low > 72
Echinicola vietnamensis KMM 6221, DSM 17526 0.32 Echvi_2514 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.27 Echvi_2202 branched-chain amino acid aminotransferase, group II low > 79
Erwinia tracheiphila SCR3 0.32 LU632_RS08930 hisH imidazole glycerol phosphate synthase subunit HisH 0.17 LU632_RS24405 branched-chain amino acid transaminase 0.81 28
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_1046 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.31 Ga0059261_3811 branched-chain amino acid aminotransferase, group II 0.97 21
Shewanella amazonensis SB2B 0.32 Sama_1945 hisH imidazole glycerol phosphate synthase subunit HisH (RefSeq) 0.28 Sama_3299 branched-chain amino acid aminotransferase (RefSeq) low > 62
Caulobacter crescentus NA1000 0.31 CCNA_03851 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.11 CCNA_03024 branched-chain amino acid aminotransferase low > 66
Alteromonas macleodii MIT1002 0.31 MIT1002_02636 Imidazole glycerol phosphate synthase subunit HisH 0.24 MIT1002_00377 Branched-chain-amino-acid aminotransferase 2 0.96 38
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_03851 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.11 CCNA_03024 branched-chain amino acid aminotransferase low > 67
Rhizobium sp. OAE497 0.31 ABIE40_RS19450 imidazole glycerol phosphate synthase subunit HisH 0.30 ABIE40_RS11350 branched-chain amino acid aminotransferase low > 107
Rhodospirillum rubrum S1H 0.31 Rru_A3596 Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (NCBI) 0.09 Rru_A2223 Branched-chain amino acid aminotransferase I (NCBI) low > 58
Dickeya dianthicola ME23 0.31 DZA65_RS10040 imidazole glycerol phosphate synthase subunit HisH 0.16 DZA65_RS21340 branched-chain amino acid transaminase
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_05100 imidazole glycerol phosphate synthase subunit HisH 0.24 CA264_00175 branched chain amino acid aminotransferase low > 74
Bacteroides thetaiotaomicron VPI-5482 0.31 BT1380 imidazole glycerol phosphate synthase subunit hisH (NCBI ptt file) 0.42 BT3892 branched-chain amino acid aminotransferase (NCBI ptt file)
Bacteroides ovatus ATCC 8483 0.31 BACOVA_00221 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.42 BACOVA_01113 branched-chain-amino-acid transaminase 0.73 80
Parabacteroides merdae CL09T00C40 0.31 HMPREF1078_RS13575 imidazole glycerol phosphate synthase subunit HisH 0.43 HMPREF1078_RS07855 branched-chain amino acid aminotransferase low > 61
Rahnella sp. WP5 0.31 EX31_RS11455 imidazole glycerol phosphate synthase subunit HisH 0.17 EX31_RS15000 branched-chain amino acid transaminase 0.92 52
Dickeya dianthicola 67-19 0.31 HGI48_RS09730 imidazole glycerol phosphate synthase subunit HisH 0.16 HGI48_RS20300 branched-chain-amino-acid transaminase low > 71
Klebsiella michiganensis M5al 0.31 BWI76_RS18940 imidazole glycerol phosphate synthase subunit HisH 0.18 BWI76_RS00970 branched chain amino acid aminotransferase 0.56 81
Shewanella oneidensis MR-1 0.30 SO2070 hisH amidotransferase HisH (NCBI ptt file) 0.27 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) 0.87 68
Mycobacterium tuberculosis H37Rv 0.30 Rv1602 Probable amidotransferase HisH 0.31 Rv2210c Branched-chain amino acid transaminase IlvE
Enterobacter sp. TBS_079 0.30 MPMX20_03005 Imidazole glycerol phosphate synthase subunit HisH 0.17 MPMX20_04500 Branched-chain-amino-acid aminotransferase low > 85
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_04965 hisH imidazole glycerol phosphate synthase subunit HisH 0.16 OKGIIK_11840 ilvE branched-chain amino acid transaminase low > 52
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS03620 imidazole glycerol phosphate synthase subunit HisH 0.28 CA265_RS22650 branched chain amino acid aminotransferase 0.91 31
Sinorhizobium meliloti 1021 0.30 SMc02572 imidazole glycerol phosphate synthase subunit HisH 0.30 SMc02896 branched-chain amino acid aminotransferase low > 103
Enterobacter asburiae PDN3 0.30 EX28DRAFT_0536 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.17 EX28DRAFT_4442 branched-chain amino acid aminotransferase, group I 0.73 31
Shewanella loihica PV-4 0.30 Shew_2201 hisH imidazole glycerol phosphate synthase subunit HisH (RefSeq) 0.27 Shew_0278 branched-chain amino acid aminotransferase (RefSeq) low > 60
Pantoea sp. MT58 0.30 IAI47_07075 imidazole glycerol phosphate synthase subunit HisH 0.17 IAI47_01030 branched-chain amino acid transaminase 0.96 12
Rhodanobacter denitrificans MT42 0.29 LRK55_RS01370 imidazole glycerol phosphate synthase subunit HisH 0.15 LRK55_RS11755 branched-chain amino acid transaminase low > 63
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF3909 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) 0.18 GFF2902 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 78
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS01590 imidazole glycerol phosphate synthase subunit HisH 0.15 LRK54_RS12020 branched-chain amino acid transaminase low > 59
Escherichia coli Nissle 1917 0.29 ECOLIN_RS11960 imidazole glycerol phosphate synthase subunit HisH 0.18 ECOLIN_RS21660 branched-chain-amino-acid transaminase
Escherichia coli ECRC98 0.29 JDDGAC_28610 hisH imidazole glycerol phosphate synthase subunit HisH 0.18 JDDGAC_18265 ilvE branched-chain-amino-acid transaminase
Escherichia coli ECRC62 0.29 BNILDI_14725 hisH imidazole glycerol phosphate synthase subunit HisH 0.18 BNILDI_04745 ilvE branched-chain-amino-acid transaminase
Escherichia coli ECRC101 0.29 OKFHMN_24500 hisH imidazole glycerol phosphate synthase subunit HisH 0.18 OKFHMN_14645 ilvE branched-chain-amino-acid transaminase
Escherichia coli ECRC101 0.29 MCAODC_20440 hisH imidazole glycerol phosphate synthase subunit HisH 0.18 MCAODC_05150 ilvE branched-chain-amino-acid transaminase
Escherichia coli BW25113 0.29 b2023 hisH imidazole glycerol phosphate synthase subunit HisH (NCBI) 0.18 b3770 ilvE branched-chain amino acid aminotransferase (NCBI) 0.94 5
Escherichia coli ECOR38 0.29 HEPCGN_03205 hisH imidazole glycerol phosphate synthase subunit HisH 0.18 HEPCGN_13355 ilvE branched-chain-amino-acid transaminase low > 85
Escherichia fergusonii Becca 0.29 EFB2_01833 Imidazole glycerol phosphate synthase subunit HisH 0.18 EFB2_04866 Branched-chain-amino-acid aminotransferase low > 86
Escherichia coli ECRC99 0.29 KEDOAH_03650 hisH imidazole glycerol phosphate synthase subunit HisH 0.18 KEDOAH_13505 ilvE branched-chain-amino-acid transaminase
Escherichia coli BL21 0.28 ECD_01925 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 0.18 ECD_03648 branched-chain amino acid aminotransferase low > 60
Escherichia coli ECOR27 0.28 NOLOHH_15815 hisH imidazole glycerol phosphate synthase subunit HisH 0.18 NOLOHH_06780 ilvE branched-chain-amino-acid transaminase low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_01677 Imidazole glycerol phosphate synthase subunit HisH 0.18 OHPLBJKB_04283 Branched-chain-amino-acid aminotransferase low > 73
Lysobacter sp. OAE881 0.28 ABIE51_RS13310 imidazole glycerol phosphate synthase subunit HisH 0.14 ABIE51_RS16505 branched-chain amino acid transaminase low > 62
Bifidobacterium breve UCC2003 0.28 BBR_RS17035 imidazole glycerol phosphate synthase subunit HisH 0.31 BBR_RS15210 branched-chain amino acid aminotransferase 0.32 20
Escherichia coli ECRC102 0.28 NIAGMN_22445 hisH imidazole glycerol phosphate synthase subunit HisH 0.18 NIAGMN_12400 ilvE branched-chain-amino-acid transaminase

Not shown: 8 genomes with orthologs for PP_0290 only; 0 genomes with orthologs for PP_3511 only