Conservation of cofitness between HER17_RS01910 and HER17_RS20620 in Pectobacterium carotovorum WPP14

94 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS01910 aspartate aminotransferase family protein 1.0 HER17_RS20620 argininosuccinate lyase 0.90 7
Dickeya dadantii 3937 0.86 DDA3937_RS19450 aspartate aminotransferase family protein 0.92 DDA3937_RS20340 argininosuccinate lyase 0.84 8
Dickeya dianthicola 67-19 0.86 HGI48_RS19570 aspartate aminotransferase family protein 0.91 HGI48_RS00885 argininosuccinate lyase 0.84 15
Dickeya dianthicola ME23 0.86 DZA65_RS20655 aspartate aminotransferase family protein 0.91 DZA65_RS00945 argininosuccinate lyase 0.91 4
Serratia liquefaciens MT49 0.82 IAI46_23590 aspartate aminotransferase family protein 0.91 IAI46_24500 argininosuccinate lyase low > 86
Klebsiella michiganensis M5al 0.80 BWI76_RS26000 aspartate aminotransferase family protein 0.88 BWI76_RS00855 argininosuccinate lyase 0.69 30
Rahnella sp. WP5 0.79 EX31_RS04630 aspartate aminotransferase family protein 0.87 EX31_RS14180 argininosuccinate lyase 0.87 26
Escherichia coli BW25113 0.79 b3359 argD bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase (NCBI) 0.87 b3960 argH argininosuccinate lyase (NCBI) 0.51 2
Enterobacter sp. TBS_079 0.79 MPMX20_04262 Acetylornithine/succinyldiaminopimelate aminotransferase 0.88 MPMX20_04520 Argininosuccinate lyase 0.56 46
Escherichia coli ECOR27 0.79 NOLOHH_09030 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.87 NOLOHH_05720 argH argininosuccinate lyase low > 75
Pantoea sp. MT58 0.79 IAI47_01955 aspartate aminotransferase family protein 0.89 IAI47_00920 argininosuccinate lyase 0.69 39
Escherichia fergusonii Becca 0.79 EFB2_00463 Acetylornithine/succinyldiaminopimelate aminotransferase 0.87 EFB2_04654 Argininosuccinate lyase low > 86
Escherichia coli BL21 0.79 ECD_03210 bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase 0.87 ECD_03845 argininosuccinate lyase 0.52 22
Escherichia coli ECRC62 0.78 BNILDI_02490 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.87 BNILDI_05805 argH argininosuccinate lyase low > 75
Escherichia coli ECOR38 0.78 HEPCGN_16055 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.87 HEPCGN_12220 argH argininosuccinate lyase 0.72 12
Escherichia coli Nissle 1917 0.78 ECOLIN_RS19240 bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.87 ECOLIN_RS22855 argininosuccinate lyase low > 55
Escherichia coli ECRC101 0.78 MCAODC_07760 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.87 MCAODC_04075 argH argininosuccinate lyase low > 87
Escherichia coli ECRC99 0.78 KEDOAH_10910 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.87 KEDOAH_14585 argH argininosuccinate lyase
Escherichia coli ECRC98 0.78 JDDGAC_20860 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.87 JDDGAC_17200 argH argininosuccinate lyase low > 86
Escherichia coli ECRC100 0.78 OKFHMN_17230 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.87 OKFHMN_13575 argH argininosuccinate lyase low > 80
Escherichia coli ECRC102 0.78 NIAGMN_15000 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.86 NIAGMN_11325 argH argininosuccinate lyase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF3710 Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) 0.89 GFF2346 Argininosuccinate lyase (EC 4.3.2.1) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_00343 Acetylornithine/succinyldiaminopimelate aminotransferase 0.87 OHPLBJKB_04090 Argininosuccinate lyase low > 73
Enterobacter asburiae PDN3 0.78 EX28DRAFT_4170 transaminase, acetylornithine/succinylornithine family/succinylornithine transaminase family 0.87 EX28DRAFT_4422 argininosuccinate lyase 0.68 45
Erwinia tracheiphila SCR3 0.77 LU632_RS22810 aspartate aminotransferase family protein 0.86 LU632_RS19600 argH argininosuccinate lyase 0.86 22
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme 0.46 Psyr_0065 argininosuccinate lyase
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme 0.46 Psyr_0065 argininosuccinate lyase
Pseudomonas sp. S08-1 0.67 OH686_21290 Succinylornithine transaminase 0.47 OH686_13885 argininosuccinate lyase low > 80
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_5665 Succinylornithine transaminase (EC 2.6.1.81) 0.46 Pf6N2E2_4429 Argininosuccinate lyase (EC 4.3.2.1)
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_18725 acetylornithine aminotransferase 0.46 AO356_12780 argininosuccinate lyase low > 104
Pseudomonas putida KT2440 0.67 PP_4481 Succinylornithine transaminase/acetylornithine aminotransferase 0.46 PP_0184 Argininosuccinate lyase 0.26 36
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_1971 Succinylornithine transaminase (EC 2.6.1.81) 0.46 PfGW456L13_854 Argininosuccinate lyase (EC 4.3.2.1) low > 87
Pseudomonas simiae WCS417 0.66 PS417_21710 Succinylornithine transaminase (EC 2.6.1.81) (from data) 0.46 PS417_27540 argininosuccinate lyase
Pseudomonas stutzeri RCH2 0.66 Psest_2719 acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family 0.46 Psest_3751 argininosuccinate lyase
Pseudomonas fluorescens SBW25 0.66 PFLU_RS23315 aspartate aminotransferase family protein 0.46 PFLU_RS29220 argininosuccinate lyase
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS23315 aspartate aminotransferase family protein 0.46 PFLU_RS29220 argininosuccinate lyase
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_3440 Succinylornithine transaminase (EC 2.6.1.81) (from data) 0.47 Pf1N1B4_2183 Argininosuccinate lyase (EC 4.3.2.1)
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_03025 acetylornithine aminotransferase 0.46 AO353_09000 argininosuccinate lyase low > 101
Shewanella loihica PV-4 0.65 Shew_0578 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.62 Shew_0206 argininosuccinate lyase (RefSeq) 0.71 26
Pseudomonas sp. RS175 0.65 PFR28_03283 Succinylornithine transaminase/acetylornithine aminotransferase 0.46 PFR28_04367 Argininosuccinate lyase
Shewanella oneidensis MR-1 0.65 SO0617 argD acetylornithine aminotransferase (NCBI ptt file) 0.62 SO0279 argH argininosuccinate lyase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.65 Sama_3011 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.65 Sama_0260 argininosuccinate lyase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.65 MIT1002_00437 Succinylornithine transaminase/acetylornithine aminotransferase 0.57 MIT1002_00467 Argininosuccinate lyase 0.98 21
Shewanella sp. ANA-3 0.65 Shewana3_0610 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.62 Shewana3_3901 argininosuccinate lyase (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_13250 aspartate aminotransferase family protein 0.73 CSW01_13360 argininosuccinate lyase 0.35 46
Kangiella aquimarina DSM 16071 0.62 B158DRAFT_2221 acetylornithine and succinylornithine transaminases/succinylornithine transaminase family 0.23 B158DRAFT_1980 argininosuccinate lyase low > 40
Paraburkholderia graminis OAS925 0.61 ABIE53_001769 succinylornithine aminotransferase 0.41 ABIE53_001311 argininosuccinate lyase
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS07695 acetylornithine aminotransferase 0.41 BPHYT_RS05210 argininosuccinate lyase
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS23375 aspartate aminotransferase family protein 0.41 QEN71_RS24970 argininosuccinate lyase
Paraburkholderia bryophila 376MFSha3.1 0.60 H281DRAFT_06478 succinylornithine aminotransferase apoenzyme 0.42 H281DRAFT_00194 argininosuccinate lyase low > 103
Marinobacter adhaerens HP15 0.60 HP15_3042 acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) (from data) 0.46 HP15_243 argininosuccinate lyase
Acinetobacter radioresistens SK82 0.60 MPMX26_02251 Succinylornithine transaminase 0.45 MPMX26_00185 Argininosuccinate lyase low > 36
Lysobacter sp. OAE881 0.48 ABIE51_RS17420 acetylornithine/succinyldiaminopimelate transaminase 0.21 ABIE51_RS13380 argininosuccinate lyase 0.80 51
Rhodanobacter denitrificans MT42 0.46 LRK55_RS06335 acetylornithine/succinylornithine family transaminase 0.19 LRK55_RS02135 argininosuccinate lyase low > 63
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS17400 acetylornithine transaminase 0.19 ABZR86_RS08695 arginosuccinate lyase (EC 4.3.2.1) (from data) low > 74
Bosea sp. OAE506 0.44 ABIE41_RS04340 aspartate aminotransferase family protein 0.41 ABIE41_RS08750 argininosuccinate lyase
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_17070 astC acetylornithine transaminase 0.19 OKGIIK_09430 argH argininosuccinate lyase low > 52
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.1117.1 hypothetical protein 0.18 Xcc-8004.2323.1 Argininosuccinate lyase (EC 4.3.2.1) low > 74
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS06590 acetylornithine/succinylornithine family transaminase 0.19 LRK54_RS02380 argininosuccinate lyase low > 59
Rhodopseudomonas palustris CGA009 0.42 TX73_024810 aspartate aminotransferase family protein 0.40 TX73_024645 argininosuccinate lyase
Agrobacterium fabrum C58 0.42 Atu0428 acetylornithine aminotransferase 0.42 Atu3599 argininosuccinate lyase
Rhizobium sp. OAE497 0.42 ABIE40_RS02320 aspartate aminotransferase family protein 0.43 ABIE40_RS17520 argininosuccinate lyase
Caulobacter crescentus NA1000 0.41 CCNA_00620 acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase 0.39 CCNA_02294 argininosuccinate lyase
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_00620 acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase 0.39 CCNA_02294 argininosuccinate lyase
Methanococcus maripaludis JJ 0.41 MMJJ_RS08660 acetylornithine transaminase 0.32 MMJJ_RS05395 argininosuccinate lyase
Methanococcus maripaludis S2 0.41 MMP_RS05690 acetylornithine transaminase 0.32 MMP_RS00095 argininosuccinate lyase
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_3205 transaminase, acetylornithine/succinylornithine family 0.39 Ga0059261_2049 argininosuccinate lyase 0.97 23
Azospirillum brasilense Sp245 0.40 AZOBR_RS19025 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] (from data) 0.44 AZOBR_RS16935 argininosuccinate lyase
Magnetospirillum magneticum AMB-1 0.40 AMB_RS01605 aspartate aminotransferase family protein 0.40 AMB_RS22715 argininosuccinate lyase
Azospirillum sp. SherDot2 0.39 MPMX19_02177 Succinylornithine transaminase/acetylornithine aminotransferase 0.44 MPMX19_05817 Argininosuccinate lyase
Sinorhizobium meliloti 1021 0.39 SMc02138 acetylornithine transaminase 0.42 SMc00725 argininosuccinate lyase low > 103
Phaeobacter inhibens DSM 17395 0.39 PGA1_c24230 acetylornithine aminotransferase ArgD 0.44 PGA1_c03450 argininosuccinate lyase ArgH
Rhodospirillum rubrum S1H 0.38 Rru_A1147 Acetylornithine and succinylornithine aminotransferase (NCBI) 0.41 Rru_A0397 Argininosuccinate lyase (NCBI) low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS11925 aspartate aminotransferase family protein 0.38 A4249_RS12555 argininosuccinate lyase
Dinoroseobacter shibae DFL-12 0.36 Dshi_0798 acetylornithine and succinylornithine aminotransferase (RefSeq) 0.41 Dshi_3062 argininosuccinate lyase (RefSeq)
Synechococcus elongatus PCC 7942 0.35 Synpcc7942_0943 argD acetylornithine aminotransferase 0.43 Synpcc7942_2475 argH argininosuccinate lyase
Desulfovibrio vulgaris Hildenborough JW710 0.35 DVU2347 argD acetylornithine aminotransferase (TIGR) 0.41 DVU1094 argH argininosuccinate lyase (TIGR) 0.98 5
Dechlorosoma suillum PS 0.35 Dsui_0023 acetylornithine/succinylornithine aminotransferase 0.42 Dsui_0111 argininosuccinate lyase
Desulfovibrio vulgaris Miyazaki F 0.34 DvMF_3149 acetylornithine aminotransferase (RefSeq) 0.40 DvMF_0048 argininosuccinate lyase (RefSeq) 0.98 5
Ralstonia solanacearum UW163 0.34 UW163_RS09005 acetylornithine transaminase 0.41 UW163_RS09390 argininosuccinate lyase
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS04665 acetylornithine transaminase 0.41 RALBFv3_RS04280 argininosuccinate lyase
Mycobacterium tuberculosis H37Rv 0.34 Rv1655 Probable acetylornithine aminotransferase ArgD 0.30 Rv1659 Probable argininosuccinate lyase ArgH
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS00285 acetylornithine transaminase 0.41 ABZR87_RS16170 argininosuccinate lyase 0.71 13
Castellaniella sp019104865 MT123 0.33 ABCV34_RS12095 acetylornithine transaminase 0.44 ABCV34_RS03060 argininosuccinate lyase
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS16670 acetylornithine aminotransferase 0.42 HSERO_RS14685 argininosuccinate lyase
Ralstonia solanacearum PSI07 0.33 RPSI07_RS12720 acetylornithine transaminase 0.40 RPSI07_RS13080 argininosuccinate lyase
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS16955 acetylornithine aminotransferase 0.42 RR42_RS15925 argininosuccinate lyase
Acidovorax sp. GW101-3H11 0.33 Ac3H11_1332 Acetylornithine aminotransferase (EC 2.6.1.11) 0.43 Ac3H11_1632 Argininosuccinate lyase (EC 4.3.2.1)
Ralstonia solanacearum GMI1000 0.32 RS_RS12225 aspartate aminotransferase family protein 0.41 RS_RS11865 argininosuccinate lyase
Variovorax sp. OAS795 0.31 ABID97_RS08635 aspartate aminotransferase family protein 0.43 ABID97_RS08190 argininosuccinate lyase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF3420 Acetylornithine aminotransferase (EC 2.6.1.11) 0.43 GFF736 Argininosuccinate lyase (EC 4.3.2.1)
Variovorax sp. SCN45 0.31 GFF3927 N-acetylornithine aminotransferase (EC 2.6.1.11) 0.43 GFF3824 Argininosuccinate lyase (EC 4.3.2.1)
Bifidobacterium breve UCC2003 0.29 BBR_RS13900 acetylornithine transaminase 0.33 BBR_RS13955 argininosuccinate lyase 0.81 3
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS15500 aspartate aminotransferase family protein 0.26 ABZR88_RS12070 argininosuccinate lyase
Pontibacter actiniarum KMM 6156, DSM 19842 0.25 CA264_15645 ornithine--oxo-acid transaminase 0.26 CA264_06225 argininosuccinate lyase low > 74

Not shown: 6 genomes with orthologs for HER17_RS01910 only; 1 genomes with orthologs for HER17_RS20620 only