Conservation of cofitness between HER17_RS04700 and HER17_RS12235 in Pectobacterium carotovorum WPP14

95 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS04700 glutamate 5-kinase 1.0 HER17_RS12235 histidinol-phosphate transaminase 0.93 3
Rahnella sp. WP5 0.90 EX31_RS20980 glutamate 5-kinase 0.75 EX31_RS11445 histidinol-phosphate transaminase 0.95 29
Serratia liquefaciens MT49 0.90 IAI46_04430 glutamate 5-kinase 0.79 IAI46_08205 histidinol-phosphate transaminase low > 86
Klebsiella michiganensis M5al 0.89 BWI76_RS05840 glutamate 5-kinase 0.74 BWI76_RS18930 histidinol-phosphate transaminase 0.83 39
Enterobacter sp. TBS_079 0.89 MPMX20_00927 Glutamate 5-kinase 0.75 MPMX20_03003 Histidinol-phosphate aminotransferase 0.94 4
Pantoea sp. MT58 0.89 IAI47_15120 glutamate 5-kinase 0.75 IAI47_07085 histidinol-phosphate transaminase 0.92 15
Enterobacter asburiae PDN3 0.89 EX28DRAFT_2651 glutamate 5-kinase 0.74 EX28DRAFT_0538 histidinol-phosphate aminotransferase 0.92 5
Dickeya dianthicola 67-19 0.89 HGI48_RS16605 glutamate 5-kinase 0.80 HGI48_RS09740 histidinol-phosphate transaminase low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF4114 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.74 GFF3911 Histidinol-phosphate aminotransferase (EC 2.6.1.9) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.88 OHPLBJKB_03398 Glutamate 5-kinase 0.73 OHPLBJKB_01679 Histidinol-phosphate aminotransferase low > 73
Escherichia coli BW25113 0.88 b0242 proB gamma-glutamyl kinase (NCBI) 0.74 b2021 hisC histidinol-phosphate aminotransferase (NCBI) 0.93 17
Escherichia coli ECOR38 0.88 HEPCGN_07780 proB Glutamate 5-kinase 0.74 HEPCGN_03215 hisC histidinol-phosphate transaminase 0.95 23
Dickeya dianthicola ME23 0.88 DZA65_RS17695 glutamate 5-kinase 0.81 DZA65_RS10050 histidinol-phosphate transaminase low > 75
Escherichia coli ECRC102 0.88 NIAGMN_07535 proB Glutamate 5-kinase 0.74 NIAGMN_22455 hisC histidinol-phosphate transaminase — —
Escherichia coli ECRC101 0.88 MCAODC_00195 proB Glutamate 5-kinase 0.74 MCAODC_20430 hisC histidinol-phosphate transaminase 0.92 10
Escherichia coli Nissle 1917 0.88 ECOLIN_RS01825 glutamate 5-kinase 0.73 ECOLIN_RS11950 histidinol-phosphate transaminase — —
Erwinia tracheiphila SCR3 0.88 LU632_RS01185 proB glutamate 5-kinase 0.73 LU632_RS08940 hisC histidinol-phosphate transaminase low > 74
Escherichia coli ECRC98 0.88 JDDGAC_13300 proB Glutamate 5-kinase 0.74 JDDGAC_28620 hisC histidinol-phosphate transaminase 0.77 56
Escherichia coli ECRC100 0.88 OKFHMN_09675 proB Glutamate 5-kinase 0.74 OKFHMN_24510 hisC histidinol-phosphate transaminase 0.93 45
Escherichia fergusonii Becca 0.88 EFB2_03778 Glutamate 5-kinase 0.74 EFB2_01835 Histidinol-phosphate aminotransferase low > 86
Escherichia coli ECRC99 0.88 KEDOAH_18480 proB Glutamate 5-kinase 0.74 KEDOAH_03640 hisC histidinol-phosphate transaminase — —
Escherichia coli ECRC62 0.88 BNILDI_00245 proB Glutamate 5-kinase 0.73 BNILDI_14735 hisC histidinol-phosphate transaminase 0.98 8
Escherichia coli BL21 0.88 ECD_00239 gamma-glutamate kinase 0.74 ECD_01923 histidinol-phosphate aminotransferase 0.89 14
Escherichia coli ECOR27 0.88 NOLOHH_02050 proB Glutamate 5-kinase 0.74 NOLOHH_15825 hisC histidinol-phosphate transaminase 0.95 22
Dickeya dadantii 3937 0.88 DDA3937_RS16535 glutamate 5-kinase 0.80 DDA3937_RS09730 histidinol-phosphate transaminase 0.75 22
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_11575 glutamate 5-kinase 0.58 CSW01_05755 histidinol-phosphate transaminase low > 62
Shewanella loihica PV-4 0.62 Shew_2848 gamma-glutamyl kinase (RefSeq) 0.42 Shew_2199 histidinol-phosphate aminotransferase (RefSeq) 0.95 32
Shewanella amazonensis SB2B 0.62 Sama_2516 gamma-glutamyl kinase (RefSeq) 0.33 Sama_1943 histidinol-phosphate aminotransferase (RefSeq) 0.93 25
Shewanella sp. ANA-3 0.59 Shewana3_0954 gamma-glutamyl kinase (RefSeq) 0.43 Shewana3_1852 histidinol phosphate aminotransferase (RefSeq) 0.95 8
Shewanella oneidensis MR-1 0.59 SO1121 proB glutamate 5-kinase (NCBI ptt file) 0.43 SO2072 hisC histidinol-phosphate aminotransferase (NCBI ptt file) 0.98 10
Dechlorosoma suillum PS 0.40 Dsui_0166 glutamate 5-kinase 0.17 Dsui_1414 histidinol-phosphate aminotransferase — —
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS25360 glutamate 5-kinase 0.17 PFLU_RS08100 histidinol-phosphate transaminase low > 109
Pseudomonas fluorescens SBW25 0.39 PFLU_RS25360 glutamate 5-kinase 0.17 PFLU_RS08100 histidinol-phosphate transaminase low > 109
Pseudomonas simiae WCS417 0.39 PS417_23545 gamma-glutamyl kinase 0.17 PS417_08130 aspartate aminotransferase low > 88
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_2800 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.17 Pf1N1B4_349 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) — —
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_14115 gamma-glutamyl kinase 0.17 AO353_02065 aspartate aminotransferase 0.45 92
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_0704 glutamate 5-kinase 0.16 Psyr_4132 histidinol phosphate aminotransferase apoenzyme 0.82 27
Paraburkholderia graminis OAS925 0.37 ABIE53_003588 glutamate 5-kinase 0.21 ABIE53_003700 histidinol-phosphate aminotransferase low > 113
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_0704 glutamate 5-kinase 0.16 Psyr_4132 histidinol phosphate aminotransferase apoenzyme 0.85 15
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_1472 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.18 PfGW456L13_2177 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) low > 87
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS17110 glutamate 5-kinase 0.21 BPHYT_RS14905 Aromatic-amino-acid transaminase (EC 2.6.1.57) (from data) — —
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_06264 glutamate 5-kinase 0.21 H281DRAFT_05654 histidinol phosphate aminotransferase apoenzyme low > 103
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS27270 glutamate 5-kinase 0.22 QEN71_RS27860 histidinol-phosphate transaminase 0.61 130
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_5103 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.17 Pf6N2E2_2519 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) low > 103
Ralstonia solanacearum UW163 0.36 UW163_RS07480 glutamate 5-kinase 0.20 UW163_RS06775 histidinol-phosphate transaminase — —
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS06145 glutamate 5-kinase 0.20 RALBFv3_RS06840 histidinol-phosphate transaminase — —
Synechococcus elongatus PCC 7942 0.36 Synpcc7942_2197 proB gamma-glutamyl kinase 0.17 Synpcc7942_1030 hisC histidinol-phosphate aminotransferase — —
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_15815 gamma-glutamyl kinase 0.17 AO356_03460 aspartate aminotransferase low > 104
Pseudomonas putida KT2440 0.36 PP_0691 Glutamate 5-kinase 0.17 PP_0967 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.35 43
Variovorax sp. OAS795 0.36 ABID97_RS23400 glutamate 5-kinase 0.18 ABID97_RS23145 histidinol-phosphate transaminase — —
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS01815 gamma-glutamyl kinase 0.17 HSERO_RS20335 histidinol-phosphate aminotransferase low > 78
Pseudomonas sp. RS175 0.36 PFR28_03769 Glutamate 5-kinase 0.17 PFR28_00908 Histidinol-phosphate aminotransferase — —
Azospirillum brasilense Sp245 0.36 AZOBR_RS04095 glutamate 5-kinase 0.18 AZOBR_RS20485 histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) — —
Pseudomonas sp. S08-1 0.36 OH686_16305 Glutamate 5-kinase / RNA-binding C-terminal domain PUA 0.18 OH686_20875 histidinol-phosphate transaminase low > 80
Azospirillum sp. SherDot2 0.36 MPMX19_01933 Glutamate 5-kinase 0.16 MPMX19_04389 Histidinol-phosphate aminotransferase — —
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS17940 gamma-glutamyl kinase 0.21 RR42_RS18910 histidinol-phosphate aminotransferase — —
Ralstonia solanacearum PSI07 0.35 RPSI07_RS11095 glutamate 5-kinase 0.20 RPSI07_RS10395 histidinol-phosphate transaminase — —
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS01810 glutamate 5-kinase 0.20 ABZR87_RS02495 histidinol-phosphate transaminase low > 80
Ralstonia solanacearum GMI1000 0.35 RS_RS14095 glutamate 5-kinase 0.20 RS_RS14785 histidinol-phosphate aminotransferase 1 — —
Castellaniella sp019104865 MT123 0.35 ABCV34_RS10800 glutamate 5-kinase 0.16 ABCV34_RS02645 histidinol-phosphate transaminase low > 48
Pseudomonas stutzeri RCH2 0.35 Psest_3384 glutamate 5-kinase 0.19 Psest_1985 histidinol-phosphate aminotransferase low > 67
Dinoroseobacter shibae DFL-12 0.35 Dshi_1467 glutamate 5-kinase (RefSeq) 0.16 Dshi_2946 histidinol-phosphate aminotransferase (RefSeq) — —
Magnetospirillum magneticum AMB-1 0.34 AMB_RS20630 glutamate 5-kinase 0.18 AMB_RS00655 histidinol-phosphate aminotransferase family protein — —
Acidovorax sp. GW101-3H11 0.34 Ac3H11_4771 Glutamate 5-kinase (EC 2.7.2.11) 0.19 Ac3H11_4729 histidinol-phosphate transaminase (EC 2.6.1.9) (from data) — —
Agrobacterium fabrum C58 0.34 Atu2780 gamma-glutamyl kinase 0.13 Atu3612 histidinol-phosphate aminotransferase — —
Sinorhizobium meliloti 1021 0.34 SMc03776 gamma-glutamyl kinase 0.15 SMc00710 histidinol-phosphate aminotransferase low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF1274 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.20 GFF1313 Histidinol-phosphate aminotransferase (EC 2.6.1.9) low > 90
Acinetobacter radioresistens SK82 0.34 MPMX26_02135 Glutamate 5-kinase 0.16 MPMX26_02586 Histidinol-phosphate aminotransferase 0.75 30
Caulobacter crescentus NA1000 0.33 CCNA_00316 glutamate 5-kinase 0.15 CCNA_02617 histidinol-phosphate aminotransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_00316 glutamate 5-kinase 0.15 CCNA_02617 histidinol-phosphate aminotransferase low > 67
Alteromonas macleodii MIT1002 0.33 MIT1002_04056 Glutamate 5-kinase 0.48 MIT1002_02634 Histidinol-phosphate aminotransferase low > 70
Marinobacter adhaerens HP15 0.33 HP15_508 gamma-glutamyl kinase 0.19 HP15_2427 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) — —
Rhodospirillum rubrum S1H 0.33 Rru_A1239 Glutamate 5-kinase, ProB-related (NCBI) 0.16 Rru_A3264 Histidinol-phosphate aminotransferase (NCBI) 0.81 3
Variovorax sp. SCN45 0.33 GFF2515 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.18 GFF5348 Histidinol-phosphate aminotransferase (EC 2.6.1.9) low > 127
Desulfovibrio vulgaris Hildenborough JW710 0.32 DVU0930 proB glutamate 5-kinase (TIGR) 0.20 DVU1029 hisC histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.83 25
Bifidobacterium breve UCC2003 0.31 BBR_RS19445 glutamate 5-kinase 0.16 BBR_RS17050 histidinol-phosphate transaminase low > 34
Phaeobacter inhibens DSM 17395 0.31 PGA1_c15510 glutamate 5-kinase ProB 0.17 PGA1_c25240 histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) — —
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS02375 glutamate 5-kinase 0.39 LRK54_RS01600 histidinol-phosphate transaminase 0.54 54
Rhodanobacter denitrificans MT42 0.30 LRK55_RS02130 glutamate 5-kinase 0.38 LRK55_RS01380 histidinol-phosphate transaminase low > 63
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.2326.1 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA 0.35 Xcc-8004.2947.1 Histidinol-phosphate aminotransferase (EC 2.6.1.9) 0.53 70
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_09420 proB glutamate 5-kinase 0.39 OKGIIK_04955 hisC histidinol-phosphate transaminase low > 52
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS16125 glutamate 5-kinase 0.17 A4249_RS11450 histidinol-phosphate transaminase low > 48
Mycobacterium tuberculosis H37Rv 0.29 Rv2439c Probable glutamate 5-kinase protein ProB (gamma-glutamyl kinase) (GK) 0.19 Rv1600 Probable histidinol-phosphate aminotransferase HisC1 — —
Lysobacter sp. OAE881 0.28 ABIE51_RS13370 glutamate 5-kinase 0.32 ABIE51_RS13320 histidinol-phosphate transaminase 0.81 39
Echinicola vietnamensis KMM 6221, DSM 17526 0.28 Echvi_4033 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.33 Echvi_2458 histidinol-phosphate aminotransferase 0.71 38
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS08685 glutamate 5-kinase 0.34 ABZR86_RS06725 histidinol-phosphate transaminase 0.85 36
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS22170 glutamate 5-kinase 0.35 ABZR88_RS06875 histidinol-phosphate transaminase 0.62 48
Pedobacter sp. GW460-11-11-14-LB5 0.27 CA265_RS20855 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.35 CA265_RS03630 histidinol-phosphate transaminase 0.91 30
Parabacteroides merdae CL09T00C40 0.27 HMPREF1078_RS10650 glutamate 5-kinase 0.34 HMPREF1078_RS02445 histidinol-phosphate transaminase 0.98 13
Bacteroides ovatus ATCC 8483 0.26 BACOVA_03537 glutamate 5-kinase 0.31 BACOVA_01233 histidinol-phosphate transaminase 0.93 31
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_07725 glutamate 5-kinase 0.36 CA264_05035 histidinol-phosphate transaminase low > 74
Bacteroides thetaiotaomicron VPI-5482 0.25 BT3719 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.29 BT0202 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.92 6
Bacteroides stercoris CC31F 0.25 HMPREF1181_RS03325 glutamate 5-kinase 0.32 HMPREF1181_RS04855 histidinol-phosphate transaminase 0.97 2
Phocaeicola vulgatus CL09T03C04 0.25 HMPREF1058_RS08650 glutamate 5-kinase 0.30 HMPREF1058_RS15880 histidinol-phosphate transaminase 0.97 1
Phocaeicola dorei CL03T12C01 0.25 ABI39_RS02880 glutamate 5-kinase 0.30 ABI39_RS11840 histidinol-phosphate transaminase 0.78 41
Sphingomonas koreensis DSMZ 15582 0.21 Ga0059261_3512 glutamate 5-kinase (EC 2.7.2.11) (from data) 0.17 Ga0059261_2299 histidinol-phosphate aminotransferase 0.90 20

Not shown: 4 genomes with orthologs for HER17_RS04700 only; 4 genomes with orthologs for HER17_RS12235 only