| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_03560 | | GTP-binding protein | 1.0 | PS417_26760 | | oxidase | 0.46 | 2 |
| Pseudomonas fluorescens SBW25 | 0.98 | PFLU_RS03610 | | redox-regulated ATPase YchF | 0.98 | PFLU_RS28405 | | radical SAM family heme chaperone HemW | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.98 | PFLU_RS03610 | | redox-regulated ATPase YchF | 0.98 | PFLU_RS28405 | | radical SAM family heme chaperone HemW | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.97 | PfGW456L13_1574 | | GTP-binding and nucleic acid-binding protein YchF | 0.91 | PfGW456L13_1003 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.52 | 14 |
| Pseudomonas fluorescens FW300-N2C3 | 0.97 | AO356_16450 | | GTP-binding protein | 0.88 | AO356_13390 | | coproporphyrinogen III oxidase | 0.55 | 4 |
| Pseudomonas fluorescens FW300-N1B4 | 0.97 | Pf1N1B4_2912 | | GTP-binding and nucleic acid-binding protein YchF | 0.92 | Pf1N1B4_2334 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.97 | AO353_14740 | | GTP-binding protein | 0.93 | AO353_08200 | | coproporphyrinogen III oxidase | 0.69 | 2 |
| Pseudomonas syringae pv. syringae B728a | 0.96 | Psyr_0941 | | Conserved hypothetical protein 92 | 0.79 | Psyr_0471 | | coproporphyrinogen III oxidase, anaerobic | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.96 | Psyr_0941 | | Conserved hypothetical protein 92 | 0.79 | Psyr_0471 | | coproporphyrinogen III oxidase, anaerobic | low | > 86 |
| Pseudomonas sp. RS175 | 0.96 | PFR28_03664 | | Ribosome-binding ATPase YchF | 0.87 | PFR28_04249 | | Heme chaperone HemW | 0.32 | 55 |
| Pseudomonas putida KT2440 | 0.93 | PP_0719 | | ribosome-associated potassium-dependent informational ATP/GTPase | 0.74 | PP_5101 | | coproporphyrinogen/heterocyclic compound oxidase (aerobic) | 0.31 | 37 |
| Pseudomonas sp. S08-1 | 0.92 | OH686_07965 | | GTP-binding and nucleic acid-binding protein YchF | 0.74 | OH686_11020 | | Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.90 | Psest_1103 | | GTP-binding protein YchF | 0.72 | Psest_0276 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.24 | 15 |
| Acinetobacter radioresistens SK82 | 0.76 | MPMX26_01861 | | Ribosome-binding ATPase YchF | 0.46 | MPMX26_00308 | | Heme chaperone HemW | 0.67 | 33 |
| Marinobacter adhaerens HP15 | 0.75 | HP15_704 | | translation-associated GTPase | 0.47 | HP15_280 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.28 | 34 |
| Shewanella sp. ANA-3 | 0.72 | Shewana3_1012 | | GTP-dependent nucleic acid-binding protein EngD (RefSeq) | 0.54 | Shewana3_1188 | | putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.72 | SO1185 | | conserved hypothetical protein TIGR00092 (NCBI ptt file) | 0.53 | SO3359 | | oxygen-independent coproporphyrinogen III oxidase, putative (NCBI ptt file) | 0.43 | 11 |
| Escherichia coli ECRC62 | 0.72 | BNILDI_18805 | ychF | redox-regulated ATPase YchF | 0.51 | BNILDI_09685 | hemW | radical SAM family heme chaperone HemW | — | — |
| Shewanella amazonensis SB2B | 0.71 | Sama_2571 | | GTP-dependent nucleic acid-binding protein EngD (RefSeq) | 0.53 | Sama_2483 | | oxygen-independent coproporphyrinogen III oxidase, putative (RefSeq) | 0.61 | 14 |
| Escherichia coli ECOR27 | 0.71 | NOLOHH_20650 | ychF | redox-regulated ATPase YchF | 0.51 | NOLOHH_11105 | hemW | radical SAM family heme chaperone HemW | — | — |
| Escherichia coli ECOR38 | 0.71 | HEPCGN_24875 | ychF | redox-regulated ATPase YchF | 0.52 | HEPCGN_18540 | hemW | radical SAM family heme chaperone HemW | — | — |
| Escherichia fergusonii Becca | 0.71 | EFB2_02724 | | Ribosome-binding ATPase YchF | 0.52 | EFB2_00947 | | Heme chaperone HemW | low | > 86 |
| Escherichia coli ECRC101 | 0.71 | MCAODC_21850 | ychF | redox-regulated ATPase YchF | 0.52 | MCAODC_09755 | hemW | radical SAM family heme chaperone HemW | — | — |
| Escherichia coli ECRC99 | 0.71 | KEDOAH_25405 | ychF | redox-regulated ATPase YchF | 0.52 | KEDOAH_08905 | hemW | radical SAM family heme chaperone HemW | — | — |
| Escherichia coli BW25113 | 0.71 | b1203 | ychF | translation-associated GTPase (NCBI) | 0.52 | b2955 | yggW | coproporphyrinogen III oxidase (NCBI) | — | — |
| Escherichia coli Nissle 1917 | 0.71 | ECOLIN_RS07280 | | redox-regulated ATPase YchF | 0.51 | ECOLIN_RS16435 | | radical SAM family heme chaperone HemW | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.71 | OHPLBJKB_02484 | | Ribosome-binding ATPase YchF | 0.52 | OHPLBJKB_00761 | | Oxygen-independent coproporphyrinogen-III oxidase-like protein YqeR | low | > 73 |
| Escherichia coli ECRC98 | 0.71 | JDDGAC_06165 | ychF | redox-regulated ATPase YchF | 0.52 | JDDGAC_22865 | hemW | radical SAM family heme chaperone HemW | — | — |
| Escherichia coli ECRC101 | 0.71 | OKFHMN_28410 | ychF | redox-regulated ATPase YchF | 0.52 | OKFHMN_19235 | hemW | radical SAM family heme chaperone HemW | — | — |
| Escherichia coli ECRC102 | 0.71 | NIAGMN_27825 | ychF | redox-regulated ATPase YchF | 0.52 | NIAGMN_17000 | hemW | radical SAM family heme chaperone HemW | — | — |
| Escherichia coli BL21 | 0.71 | ECD_01178 | | catalase inhibitor protein; ATPase, K+-dependent, ribosome-associated | 0.52 | ECD_02785 | | HemN family putative oxidoreductase | — | — |
| Erwinia tracheiphila SCR3 | 0.71 | LU632_RS13950 | ychF | redox-regulated ATPase YchF | 0.51 | LU632_RS05445 | hemW | radical SAM family heme chaperone HemW | low | > 74 |
| Dickeya dianthicola 67-19 | 0.71 | HGI48_RS10975 | | redox-regulated ATPase YchF | 0.51 | HGI48_RS17370 | | radical SAM family heme chaperone HemW | low | > 71 |
| Dickeya dadantii 3937 | 0.71 | DDA3937_RS11035 | | redox-regulated ATPase YchF | 0.50 | DDA3937_RS17325 | | radical SAM family heme chaperone HemW | 0.61 | 6 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.71 | GFF2784 | | GTP-binding and nucleic acid-binding protein YchF | 0.52 | GFF3058 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | 0.67 | 55 |
| Dickeya dianthicola ME23 | 0.71 | DZA65_RS11435 | | redox-regulated ATPase YchF | 0.51 | DZA65_RS18460 | | radical SAM family heme chaperone HemW | low | > 75 |
| Pantoea sp. MT58 | 0.71 | IAI47_11310 | | redox-regulated ATPase YchF | 0.52 | IAI47_03580 | | radical SAM family heme chaperone HemW | low | > 76 |
| Kangiella aquimarina DSM 16071 | 0.70 | B158DRAFT_2052 | | GTP-binding protein YchF | 0.55 | B158DRAFT_0201 | | coproporphyrinogen III oxidase, anaerobic (EC 1.3.99.22) | 0.47 | 4 |
| Pectobacterium carotovorum WPP14 | 0.70 | HER17_RS10445 | | redox-regulated ATPase YchF | 0.53 | HER17_RS03785 | | radical SAM family heme chaperone HemW | low | > 75 |
| Klebsiella michiganensis M5al | 0.69 | BWI76_RS17485 | | GTP-binding protein YchF | 0.52 | BWI76_RS24120 | | YggW family oxidoreductase | — | — |
| Lysobacter sp. OAE881 | 0.69 | ABIE51_RS05745 | | redox-regulated ATPase YchF | 0.49 | ABIE51_RS17300 | | radical SAM family heme chaperone HemW | 0.57 | 15 |
| Enterobacter sp. TBS_079 | 0.69 | MPMX20_02645 | | Ribosome-binding ATPase YchF | 0.52 | MPMX20_03813 | | Heme chaperone HemW | low | > 85 |
| Alteromonas macleodii MIT1002 | 0.69 | MIT1002_01504 | | Ribosome-binding ATPase YchF | 0.49 | MIT1002_00939 | | Oxygen-independent coproporphyrinogen-III oxidase 1 | low | > 70 |
| Rahnella sp. WP5 | 0.69 | EX31_RS07380 | | redox-regulated ATPase YchF | 0.52 | EX31_RS02710 | | radical SAM family heme chaperone HemW | low | > 89 |
| Vibrio cholerae E7946 ATCC 55056 | 0.69 | CSW01_10875 | | redox-regulated ATPase YchF | 0.52 | CSW01_02425 | | YggW family oxidoreductase | low | > 62 |
| Shewanella loihica PV-4 | 0.69 | Shew_2919 | | translation-associated GTPase (RefSeq) | 0.52 | Shew_1131 | | putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) | low | > 60 |
| Dyella japonica UNC79MFTsu3.2 | 0.69 | ABZR86_RS22010 | | redox-regulated ATPase YchF | 0.49 | ABZR86_RS11910 | | radical SAM family heme chaperone HemW | 0.63 | 12 |
| Enterobacter asburiae PDN3 | 0.69 | EX28DRAFT_0821 | | GTP-binding protein YchF | 0.51 | EX28DRAFT_2993 | | putative oxygen-independent coproporphyrinogen III oxidase | — | — |
| Serratia liquefaciens MT49 | 0.68 | IAI46_10240 | | redox-regulated ATPase YchF | 0.54 | IAI46_21435 | | radical SAM family heme chaperone HemW | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.68 | Xcc-8004.4168.1 | | GTP-binding and nucleic acid-binding protein YchF | 0.48 | Xcc-8004.1224.1 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | low | > 74 |
| Burkholderia phytofirmans PsJN | 0.67 | BPHYT_RS17445 | | GTP-binding protein YchF | 0.47 | BPHYT_RS15335 | | coproporphyrinogen III oxidase | 0.56 | 11 |
| Paraburkholderia graminis OAS925 | 0.67 | ABIE53_003650 | | GTP-binding protein YchF | 0.48 | ABIE53_003236 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.51 | 24 |
| Rhodanobacter sp. FW510-T8 | 0.67 | OKGIIK_10565 | | Ribosome-binding ATPase YchF | 0.47 | OKGIIK_12160 | hemW | radical SAM family heme chaperone HemW | low | > 52 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.67 | H281DRAFT_05705 | | hypothetical protein | 0.47 | H281DRAFT_04010 | | oxygen-independent coproporphyrinogen-3 oxidase | low | > 103 |
| Rhodanobacter denitrificans FW104-10B01 | 0.66 | LRK54_RS03675 | | redox-regulated ATPase YchF | 0.50 | LRK54_RS11735 | | radical SAM family heme chaperone HemW | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.66 | LRK55_RS03425 | | redox-regulated ATPase YchF | 0.50 | LRK55_RS11460 | | radical SAM family heme chaperone HemW | low | > 63 |
| Castellaniella sp019104865 MT123 | 0.66 | ABCV34_RS09215 | | redox-regulated ATPase YchF | 0.45 | ABCV34_RS03525 | | radical SAM family heme chaperone HemW | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.65 | QEN71_RS27600 | | redox-regulated ATPase YchF | 0.48 | QEN71_RS03635 | | radical SAM family heme chaperone HemW | low | > 153 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.65 | GFF630 | | GTP-binding and nucleic acid-binding protein YchF | 0.46 | GFF3256 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | low | > 90 |
| Ralstonia solanacearum GMI1000 | 0.65 | RS_RS14520 | | redox-regulated ATPase YchF | 0.47 | RS_RS10840 | | oxygen-independent coproporphyrinogen III oxidase-like protein | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.65 | ABZR87_RS02220 | | redox-regulated ATPase YchF | 0.46 | ABZR87_RS15265 | | radical SAM family heme chaperone HemW | 0.70 | 9 |
| Cupriavidus basilensis FW507-4G11 | 0.65 | RR42_RS18365 | | GTP-binding protein | 0.50 | RR42_RS04880 | | coproporphyrinogen III oxidase | 0.33 | 37 |
| Variovorax sp. SCN45 | 0.64 | GFF2141 | | GTP-binding and nucleic acid-binding protein YchF | 0.46 | GFF2383 | | Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW | low | > 127 |
| Ralstonia solanacearum PSI07 | 0.64 | RPSI07_RS10660 | | redox-regulated ATPase YchF | 0.48 | RPSI07_RS13830 | | oxygen-independent coproporphyrinogen III oxidase-like protein | low | > 81 |
| Ralstonia solanacearum UW163 | 0.64 | UW163_RS07055 | | redox-regulated ATPase YchF | 0.46 | UW163_RS10365 | | oxygen-independent coproporphyrinogen III oxidase-like protein | — | — |
| Acidovorax sp. GW101-3H11 | 0.64 | Ac3H11_4001 | | GTP-binding and nucleic acid-binding protein YchF | 0.44 | Ac3H11_3672 | | Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.64 | RALBFv3_RS06570 | | redox-regulated ATPase YchF | 0.46 | RALBFv3_RS03355 | | oxygen-independent coproporphyrinogen III oxidase-like protein | low | > 76 |
| Variovorax sp. OAS795 | 0.63 | ABID97_RS24750 | | redox-regulated ATPase YchF | 0.47 | ABID97_RS23630 | | radical SAM family heme chaperone HemW | 0.62 | 3 |
| Dechlorosoma suillum PS | 0.63 | Dsui_1039 | | GTP-binding protein YchF | 0.49 | Dsui_0491 | | putative oxygen-independent coproporphyrinogen III oxidase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.63 | HSERO_RS20405 | | GTP-binding protein YchF | 0.50 | HSERO_RS10665 | | coproporphyrinogen III oxidase | low | > 78 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.59 | CA264_07495 | | GTP-binding protein YchF | 0.24 | CA264_16765 | | coproporphyrinogen III oxidase | 0.42 | 19 |
| Azospirillum brasilense Sp245 | 0.59 | AZOBR_RS30645 | | GTP-binding protein YchF | 0.32 | AZOBR_RS02195 | | coproporphyrinogen III oxidase | — | — |
| Rhizobium sp. OAE497 | 0.58 | ABIE40_RS13100 | | redox-regulated ATPase YchF | 0.29 | ABIE40_RS01625 | | radical SAM family heme chaperone HemW | — | — |
| Azospirillum sp. SherDot2 | 0.58 | MPMX19_01641 | | Ribosome-binding ATPase YchF | 0.30 | MPMX19_02574 | | Heme chaperone HemW | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.58 | BT3116 | | GTP-binding protein (NCBI ptt file) | 0.22 | BT2168 | | coproporphyrinogen III oxidase (NCBI ptt file) | — | — |
| Rhodopseudomonas palustris CGA009 | 0.58 | TX73_022570 | | redox-regulated ATPase YchF | 0.28 | TX73_001700 | | radical SAM family heme chaperone HemW | — | — |
| Sinorhizobium meliloti 1021 | 0.58 | SMc02695 | | GTP-dependent nucleic acid-binding protein EngD | 0.28 | SMc01147 | | coproporphyrinogen III oxidase | low | > 103 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.58 | ABZR88_RS14155 | | redox-regulated ATPase YchF | 0.21 | ABZR88_RS03545 | | radical SAM family heme chaperone HemW | low | > 71 |
| Magnetospirillum magneticum AMB-1 | 0.57 | AMB_RS21985 | | redox-regulated ATPase YchF | 0.26 | AMB_RS22770 | | radical SAM protein | — | — |
| Agrobacterium fabrum C58 | 0.57 | Atu2233 | | GTP-binding protein | 0.28 | Atu0325 | | oxygen-independent coproporphyrinogen III oxidase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.57 | Dshi_0954 | | GTP-binding protein YchF (RefSeq) | 0.29 | Dshi_3460 | | putative oxygen-independent coproporphyrinogen III oxidase (RefSeq) | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.57 | Echvi_2525 | | GTP-binding protein YchF | 0.24 | Echvi_0628 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.65 | 2 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.57 | CA265_RS13275 | | redox-regulated ATPase YchF | 0.22 | CA265_RS18155 | | coproporphyrinogen III oxidase | 0.61 | 12 |
| Bosea sp. OAE506 | 0.57 | ABIE41_RS11295 | | redox-regulated ATPase YchF | 0.27 | ABIE41_RS03305 | | radical SAM family heme chaperone HemW | — | — |
| Phocaeicola dorei CL03T12C01 | 0.57 | ABI39_RS05450 | | redox-regulated ATPase YchF | 0.23 | ABI39_RS00100 | | radical SAM family heme chaperone HemW | 0.46 | 55 |
| Parabacteroides merdae CL09T00C40 | 0.57 | HMPREF1078_RS06345 | | redox-regulated ATPase YchF | 0.25 | HMPREF1078_RS11035 | | radical SAM family heme chaperone HemW | 0.73 | 28 |
| Phocaeicola vulgatus CL09T03C04 | 0.57 | HMPREF1058_RS11490 | | redox-regulated ATPase YchF | 0.23 | HMPREF1058_RS07680 | | radical SAM family heme chaperone HemW | 0.49 | 29 |
| Rhodospirillum rubrum S1H | 0.56 | Rru_A3748 | | hypothetical protein (NCBI) | 0.29 | Rru_A3639 | | Putative oxygen-independent coproporphyrinogen III oxidase (NCBI) | low | > 58 |
| Phaeobacter inhibens DSM 17395 | 0.56 | PGA1_c04950 | | GTP-dependent nucleic acid-binding protein EngD | 0.30 | PGA1_c35050 | | oxygen-independent coproporphyrinogen III oxidase HemN | 0.30 | 53 |
| Fusobacterium nucleatum SB010 | 0.56 | HUW76_08540 | | redox-regulated ATPase YchF | 0.25 | HUW76_07285 | | radical SAM family heme chaperone HemW | low | > 35 |
| Caulobacter crescentus NA1000 Δfur | 0.55 | CCNA_00512 | | GTP-binding protein, probable translation factor | 0.25 | CCNA_00144 | | oxygen-independent coproporphyrinogen-III oxidase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.55 | CCNA_00512 | | GTP-binding protein, probable translation factor | 0.25 | CCNA_00144 | | oxygen-independent coproporphyrinogen-III oxidase | low | > 66 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.55 | A4249_RS09035 | | redox-regulated ATPase YchF | 0.25 | A4249_RS12445 | | radical SAM family heme chaperone HemW | low | > 48 |
| Sphingomonas koreensis DSMZ 15582 | 0.53 | Ga0059261_3227 | | GTP-binding protein YchF | 0.27 | Ga0059261_2753 | | putative oxygen-independent coproporphyrinogen III oxidase | 0.38 | 50 |
| Bacteroides stercoris CC31F | 0.53 | HMPREF1181_RS02000 | | redox-regulated ATPase YchF | 0.21 | HMPREF1181_RS06440 | | radical SAM family heme chaperone HemW | low | > 56 |
| Synechococcus elongatus PCC 7942 | 0.51 | Synpcc7942_0554 | ychF | translation-associated GTPase | 0.26 | Synpcc7942_2382 | hemN | coproporphyrinogen III oxidase | 0.73 | 8 |
| Desulfovibrio vulgaris Miyazaki F | 0.49 | DvMF_0234 | | GTP-dependent nucleic acid-binding protein EngD (RefSeq) | 0.24 | DvMF_2374 | | oxygen-independent coproporphyrinogen III oxidase (RefSeq) | low | > 51 |
| Bifidobacterium breve UCC2003 | 0.46 | BBR_RS14650 | | redox-regulated ATPase YchF | 0.21 | BBR_RS15235 | | coproporphyrinogen III oxidase | — | — |
| Mycobacterium tuberculosis H37Rv | 0.42 | Rv1112 | | Probable GTP binding protein | 0.22 | Rv2388c | | Probable oxygen-independent coproporphyrinogen III oxidase HemN (coproporphyrinogenase) (coprogen oxidase) | 0.48 | 3 |
Not shown: 2 genomes with orthologs for PS417_03560 only; 1 genomes with orthologs for PS417_26760 only