Conservation of cofitness between GFF1179 and GFF4346 in Hydrogenophaga sp. GW460-11-11-14-LB1

96 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF1179 Uracil phosphoribosyltransferase (EC 2.4.2.9) 1.0 GFF4346 GTP-binding protein TypA/BipA 0.55 8
Variovorax sp. OAS795 0.80 ABID97_RS16850 uracil phosphoribosyltransferase 0.92 ABID97_RS16470 translational GTPase TypA low > 91
Variovorax sp. SCN45 0.80 GFF324 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.93 GFF219 GTP-binding protein TypA/BipA low > 127
Acidovorax sp. GW101-3H11 0.79 Ac3H11_2428 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.90 Ac3H11_2864 GTP-binding protein TypA/BipA — —
Bosea sp. OAE506 0.67 ABIE41_RS22700 uracil phosphoribosyltransferase 0.50 ABIE41_RS04255 translational GTPase TypA 0.43 4
Rhizobium sp. OAE497 0.66 ABIE40_RS00825 uracil phosphoribosyltransferase 0.51 ABIE40_RS18125 translational GTPase TypA low > 107
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS30815 uracil phosphoribosyltransferase 0.69 RR42_RS12810 GTP-binding protein — —
Agrobacterium fabrum C58 0.66 Atu0135 uracil phosphoribosyltransferase 0.50 Atu2663 GTP-binding tyrosin phosphorylated protein — —
Dinoroseobacter shibae DFL-12 0.65 Dshi_0831 uracil phosphoribosyltransferase (RefSeq) 0.51 Dshi_0019 GTP-binding protein TypA (RefSeq) low > 64
Sinorhizobium meliloti 1021 0.65 SMc04121 uracil phosphoribosyltransferase 0.52 SMc03242 GTP-binding protein low > 103
Phaeobacter inhibens DSM 17395 0.63 PGA1_c11960 uracil phosphoribosyltransferase Upp 0.51 PGA1_c15300 GTP-binding protein TypA low > 62
Caulobacter crescentus NA1000 0.60 CCNA_02351 uracil phosphoribosyltransferase 0.49 CCNA_00778 GTP-binding protein TypA/BipA low > 66
Caulobacter crescentus NA1000 Δfur 0.60 CCNA_02351 uracil phosphoribosyltransferase 0.49 CCNA_00778 GTP-binding protein TypA/BipA low > 67
Rhodospirillum rubrum S1H 0.56 Rru_A2255 Uracil phosphoribosyl transferase (NCBI) 0.49 Rru_A0148 GTP-binding protein TypA (NCBI) low > 58
Fusobacterium nucleatum SB010 0.53 HUW76_07615 uracil phosphoribosyltransferase 0.53 HUW76_06170 translational GTPase TypA low > 35
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_16565 uracil phosphoribosyltransferase 0.56 AO356_09695 GTP-binding protein TypA — —
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_5235 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.56 Pf6N2E2_3818 GTP-binding protein TypA/BipA — —
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS03500 uracil phosphoribosyltransferase 0.69 HSERO_RS17980 GTP-binding protein low > 78
Pseudomonas putida KT2440 0.53 PP_0746 Uracil phosphoribosyltransferase 0.56 PP_5044 ribosome associated GTPase — —
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS24390 uracil phosphoribosyltransferase 0.69 QEN71_RS23065 translational GTPase TypA — —
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_1597 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.55 PfGW456L13_340 GTP-binding protein TypA/BipA — —
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS06415 uracil phosphoribosyltransferase 0.70 BPHYT_RS08105 GTP-binding protein — —
Pseudomonas sp. RS175 0.52 PFR28_03641 Uracil phosphoribosyltransferase 0.56 PFR28_04951 GTP-binding protein TypA/BipA — —
Paraburkholderia graminis OAS925 0.52 ABIE53_001547 uracil phosphoribosyltransferase 0.70 ABIE53_002454 GTP-binding protein — —
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS03530 uracil phosphoribosyltransferase 0.70 RALBFv3_RS15715 translational GTPase TypA — —
Ralstonia solanacearum UW163 0.52 UW163_RS10140 uracil phosphoribosyltransferase 0.70 UW163_RS13160 translational GTPase TypA — —
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_04523 uracil phosphoribosyltransferase 0.70 H281DRAFT_05111 GTP-binding protein — —
Azospirillum sp. SherDot2 0.51 MPMX19_02205 Uracil phosphoribosyltransferase 0.50 MPMX19_01378 GTP-binding protein TypA/BipA — —
Pseudomonas sp. S08-1 0.51 OH686_17985 uracil phosphoribosyltransferase 0.56 OH686_10610 GTP-binding protein TypA/BipA low > 80
Ralstonia solanacearum GMI1000 0.51 RS_RS10980 uracil phosphoribosyltransferase 0.70 RS_RS06495 translational GTPase TypA — —
Pseudomonas fluorescens SBW25 0.51 PFLU_RS04485 uracil phosphoribosyltransferase 0.55 PFLU_RS01720 translational GTPase TypA — —
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_14855 uracil phosphoribosyltransferase 0.55 AO353_12180 GTP-binding protein TypA — —
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS04485 uracil phosphoribosyltransferase 0.55 PFLU_RS01720 translational GTPase TypA — —
Pseudomonas simiae WCS417 0.51 PS417_04435 uracil phosphoribosyltransferase 0.55 PS417_01665 GTP-binding protein TypA — —
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_2934 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.43 Pf1N1B4_1601 GTP-binding protein TypA/BipA — —
Dickeya dianthicola 67-19 0.51 HGI48_RS06075 uracil phosphoribosyltransferase 0.58 HGI48_RS21220 ribosome-dependent GTPase TypA low > 71
Dickeya dianthicola ME23 0.51 DZA65_RS06425 uracil phosphoribosyltransferase 0.58 DZA65_RS22195 ribosome-dependent GTPase TypA low > 75
Ralstonia solanacearum PSI07 0.51 RPSI07_RS13695 uracil phosphoribosyltransferase 0.70 RPSI07_RS17640 translational GTPase TypA low > 81
Dickeya dadantii 3937 0.51 DDA3937_RS06030 uracil phosphoribosyltransferase 0.59 DDA3937_RS00140 ribosome-dependent GTPase TypA low > 74
Escherichia coli ECOR27 0.50 NOLOHH_13465 upp uracil phosphoribosyltransferase 0.58 NOLOHH_06220 typA ribosome-dependent GTPase TypA low > 75
Escherichia coli BL21 0.50 ECD_02390 uracil phosphoribosyltransferase 0.58 ECD_03756 GTP-binding protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_01228 Uracil phosphoribosyltransferase 0.58 OHPLBJKB_04181 GTP-binding protein TypA/BipA 0.74 24
Escherichia coli ECRC62 0.50 BNILDI_12275 upp uracil phosphoribosyltransferase 0.58 BNILDI_05310 typA ribosome-dependent GTPase TypA low > 75
Escherichia fergusonii Becca 0.50 EFB2_01400 Uracil phosphoribosyltransferase 0.58 EFB2_04745 GTP-binding protein TypA/BipA low > 86
Escherichia coli ECRC102 0.50 NIAGMN_19585 upp uracil phosphoribosyltransferase 0.58 NIAGMN_11845 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECOR38 0.50 HEPCGN_20980 upp uracil phosphoribosyltransferase 0.58 HEPCGN_12720 typA ribosome-dependent GTPase TypA low > 87
Escherichia coli BW25113 0.50 b2498 upp uracil phosphoribosyltransferase (VIMSS) 0.58 b3871 bipA GTP-binding protein (NCBI) 0.22 15
Escherichia coli ECRC99 0.50 KEDOAH_06405 upp uracil phosphoribosyltransferase 0.58 KEDOAH_14060 typA ribosome-dependent GTPase TypA — —
Escherichia coli Nissle 1917 0.50 ECOLIN_RS14185 uracil phosphoribosyltransferase 0.58 ECOLIN_RS22315 ribosome-dependent GTPase TypA low > 55
Escherichia coli ECRC101 0.50 MCAODC_12345 upp uracil phosphoribosyltransferase 0.58 MCAODC_04590 typA ribosome-dependent GTPase TypA low > 87
Escherichia coli ECRC100 0.50 OKFHMN_21815 upp uracil phosphoribosyltransferase 0.58 OKFHMN_14090 typA ribosome-dependent GTPase TypA low > 80
Escherichia coli ECRC98 0.50 JDDGAC_25760 upp uracil phosphoribosyltransferase 0.58 JDDGAC_17715 typA ribosome-dependent GTPase TypA low > 86
Acinetobacter radioresistens SK82 0.50 MPMX26_02542 Uracil phosphoribosyltransferase 0.57 MPMX26_02489 GTP-binding protein TypA/BipA low > 36
Azospirillum brasilense Sp245 0.50 AZOBR_RS03150 uracil phosphoribosyltransferase 0.51 AZOBR_RS09920 GTP-binding protein TypA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_0969 uracil phosphoribosyltransferase 0.56 Psyr_4815 Small GTP-binding protein domain:GTP-binding protein TypA — —
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_0969 uracil phosphoribosyltransferase 0.56 Psyr_4815 Small GTP-binding protein domain:GTP-binding protein TypA — —
Pectobacterium carotovorum WPP14 0.50 HER17_RS15460 uracil phosphoribosyltransferase 0.58 HER17_RS21425 ribosome-dependent GTPase TypA low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF2171 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.58 GFF2223 GTP-binding protein TypA/BipA 0.80 48
Enterobacter sp. TBS_079 0.50 MPMX20_03352 Uracil phosphoribosyltransferase 0.58 MPMX20_04594 GTP-binding protein TypA/BipA — —
Shewanella sp. ANA-3 0.50 Shewana3_2544 upp uracil phosphoribosyltransferase (RefSeq) 0.59 Shewana3_0301 GTP-binding protein TypA (RefSeq) low > 73
Pseudomonas stutzeri RCH2 0.50 Psest_1120 uracil phosphoribosyltransferase 0.56 Psest_3926 GTP-binding protein TypA/BipA low > 67
Shewanella oneidensis MR-1 0.50 SO2759 upp uracil phosphoribosyltransferase (NCBI ptt file) 0.58 SO4408 bipA virulence regulator BipA (NCBI ptt file) low > 76
Castellaniella sp019104865 MT123 0.50 ABCV34_RS15380 uracil phosphoribosyltransferase 0.69 ABCV34_RS02140 translational GTPase TypA — —
Klebsiella michiganensis M5al 0.50 BWI76_RS20945 uracil phosphoribosyltransferase 0.59 BWI76_RS00410 translational GTPase TypA — —
Enterobacter asburiae PDN3 0.50 EX28DRAFT_0170 uracil phosphoribosyltransferase (EC 2.4.2.9) 0.58 EX28DRAFT_4353 GTP-binding protein TypA/BipA — —
Rahnella sp. WP5 0.50 EX31_RS22700 uracil phosphoribosyltransferase 0.58 EX31_RS15865 ribosome-dependent GTPase TypA low > 89
Shewanella loihica PV-4 0.50 Shew_1514 upp uracil phosphoribosyltransferase (RefSeq) 0.59 Shew_3553 GTP-binding protein TypA (RefSeq) low > 60
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS15395 uracil phosphoribosyltransferase 0.70 ABZR87_RS11245 translational GTPase TypA low > 80
Erwinia tracheiphila SCR3 0.49 LU632_RS08280 upp uracil phosphoribosyltransferase 0.58 LU632_RS22150 typA ribosome-dependent GTPase TypA low > 74
Lysobacter sp. OAE881 0.49 ABIE51_RS15050 uracil phosphoribosyltransferase 0.59 ABIE51_RS05990 translational GTPase TypA low > 62
Pantoea sp. MT58 0.49 IAI47_05185 uracil phosphoribosyltransferase 0.58 IAI47_00465 ribosome-dependent GTPase TypA low > 76
Marinobacter adhaerens HP15 0.49 HP15_2306 uracil phosphoribosyltransferase 0.57 HP15_429 GTP-binding protein TypA low > 73
Serratia liquefaciens MT49 0.49 IAI46_18880 uracil phosphoribosyltransferase 0.58 IAI46_24945 ribosome-dependent GTPase TypA low > 86
Shewanella amazonensis SB2B 0.49 Sama_2096 upp uracil phosphoribosyltransferase (RefSeq) 0.58 Sama_3415 virulence regulator BipA (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_11345 uracil phosphoribosyltransferase 0.58 CSW01_13840 translational GTPase TypA low > 62
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS09615 uracil phosphoribosyltransferase 0.58 ABZR86_RS20640 translational GTPase TypA low > 74
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS03170 uracil phosphoribosyltransferase 0.58 LRK54_RS00775 translational GTPase TypA low > 59
Rhodanobacter denitrificans MT42 0.48 LRK55_RS02920 uracil phosphoribosyltransferase 0.58 LRK55_RS00550 translational GTPase TypA low > 63
Desulfovibrio vulgaris Hildenborough JW710 0.48 DVU1025 upp uracil phosphoribosyltransferase (TIGR) 0.48 DVU2231 typA GTP-binding protein TypA (TIGR) — —
Alteromonas macleodii MIT1002 0.47 MIT1002_02893 Uracil phosphoribosyltransferase 0.57 MIT1002_03181 hypothetical protein low > 70
Dechlorosoma suillum PS 0.47 Dsui_2333 uracil phosphoribosyltransferase 0.66 Dsui_2423 GTP-binding protein TypA/BipA — —
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_10040 upp uracil phosphoribosyltransferase 0.57 OKGIIK_06470 typA translational GTPase TypA — —
Desulfovibrio vulgaris Miyazaki F 0.47 DvMF_0911 uracil phosphoribosyltransferase (RefSeq) 0.49 DvMF_0822 GTP-binding protein TypA (RefSeq) low > 51
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.2160.1 Uracil phosphoribosyltransferase (EC 2.4.2.9) 0.59 Xcc-8004.4106.1 GTP-binding protein TypA/BipA — —
Bifidobacterium breve UCC2003 0.39 BBR_RS19680 uracil phosphoribosyltransferase 0.43 BBR_RS16690 translational GTPase TypA — —
Mycobacterium tuberculosis H37Rv 0.39 Rv3309c Probable uracil phosphoribosyltransferase Upp (UMP pyrophosphorylase) (uprtase) (UMP diphosphorylase) 0.41 Rv1165 Possible GTP-binding translation elongation factor TypA (tyrosine phosphorylated protein A) (GTP-binding protein) low > 58
Synechococcus elongatus PCC 7942 0.35 Synpcc7942_1715 upp uracil phosphoribosyltransferase 0.52 Synpcc7942_1525 typA GTP-binding protein TypA — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.28 CA264_14760 uracil phosphoribosyltransferase 0.49 CA264_00540 translational GTPase TypA low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.26 Echvi_0597 Uracil phosphoribosyltransferase 0.48 Echvi_4063 GTP-binding protein TypA/BipA — —
Phocaeicola dorei CL03T12C01 0.23 ABI39_RS06680 uracil phosphoribosyltransferase 0.49 ABI39_RS06695 translational GTPase TypA low > 72
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS01165 uracil phosphoribosyltransferase 0.50 HMPREF1181_RS01180 translational GTPase TypA low > 56
Phocaeicola vulgatus CL09T03C04 0.22 HMPREF1058_RS10070 uracil phosphoribosyltransferase 0.49 HMPREF1058_RS10055 translational GTPase TypA low > 67
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS00655 uracil phosphoribosyltransferase 0.48 HMPREF1078_RS17580 translational GTPase TypA low > 61
Bacteroides ovatus ATCC 8483 0.21 BACOVA_02012 putative uracil phosphoribosyltransferase 0.50 BACOVA_01078 GTP-binding protein TypA low > 94
Mucilaginibacter yixingensis YX-36 DSM 26809 0.21 ABZR88_RS00770 uracil phosphoribosyltransferase 0.49 ABZR88_RS00415 translational GTPase TypA — —
Pedobacter sp. GW460-11-11-14-LB5 0.21 CA265_RS19460 uracil phosphoribosyltransferase 0.49 CA265_RS23750 translational GTPase TypA low > 88
Bacteroides thetaiotaomicron VPI-5482 0.21 BT2791 uracil phosphoribosyltransferase (NCBI ptt file) 0.49 BT2787 GTP-binding elongation factor family protein TypA/BipA (NCBI ptt file) low > 81

Not shown: 2 genomes with orthologs for GFF1179 only; 4 genomes with orthologs for GFF4346 only