Conservation of cofitness between Psest_1473 and Psest_3298 in Pseudomonas stutzeri RCH2

97 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1473 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 1.0 Psest_3298 histidinol dehydrogenase 0.59 15
Pseudomonas putida KT2440 0.74 PP_1664 phosphoribosylglycinamide formyltransferase 1 0.87 PP_0966 Histidinol dehydrogenase 0.34 31
Pseudomonas sp. S08-1 0.73 OH686_18990 phosphoribosylglycinamide formyltransferase 0.92 OH686_08470 Histidinol dehydrogenase 0.54 43
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_02685 phosphoribosylglycinamide formyltransferase 0.89 AO353_05110 histidinol dehydrogenase 0.67 13
Pseudomonas sp. RS175 0.72 PFR28_03218 Phosphoribosylglycinamide formyltransferase 0.89 PFR28_00187 Histidinol dehydrogenase 0.44 24
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase 0.90 Psyr_4133 histidinol dehydrogenase 0.65 9
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase 0.90 Psyr_4133 histidinol dehydrogenase 0.43 78
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_5728 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.89 Pf6N2E2_3252 Histidinol dehydrogenase (EC 1.1.1.23) 0.55 39
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_19085 phosphoribosylglycinamide formyltransferase 0.89 AO356_06965 histidinol dehydrogenase 0.70 23
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_3697 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.90 Pf1N1B4_1066 Histidinol dehydrogenase (EC 1.1.1.23) — —
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS22070 phosphoribosylglycinamide formyltransferase 0.88 PFLU_RS04470 histidinol dehydrogenase low > 109
Pseudomonas simiae WCS417 0.70 PS417_20125 phosphoribosylglycinamide formyltransferase 0.88 PS417_04420 histidinol dehydrogenase 0.65 7
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_4253 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.89 PfGW456L13_5000 Histidinol dehydrogenase (EC 1.1.1.23) 0.54 29
Pseudomonas fluorescens SBW25 0.70 PFLU_RS22070 phosphoribosylglycinamide formyltransferase 0.88 PFLU_RS04470 histidinol dehydrogenase low > 109
Escherichia fergusonii Becca 0.60 EFB2_01398 Phosphoribosylglycinamide formyltransferase 0.34 EFB2_01836 Histidinol dehydrogenase low > 86
Escherichia coli ECOR27 0.60 NOLOHH_13455 purN phosphoribosylglycinamide formyltransferase 0.34 NOLOHH_15830 hisD Histidinol dehydrogenase low > 57
Escherichia coli ECRC99 0.60 KEDOAH_06415 purN phosphoribosylglycinamide formyltransferase 0.34 KEDOAH_03635 hisD Histidinol dehydrogenase — —
Escherichia coli BL21 0.60 ECD_02392 phosphoribosylglycinamide formyltransferase 1 0.34 ECD_01922 bifunctional histidinal dehydrogenase/ histidinol dehydrogenase low > 60
Escherichia coli ECOR38 0.60 HEPCGN_20970 purN phosphoribosylglycinamide formyltransferase 0.34 HEPCGN_03220 hisD Histidinol dehydrogenase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_01226 Phosphoribosylglycinamide formyltransferase 0.34 OHPLBJKB_01680 Histidinol dehydrogenase low > 73
Escherichia coli Nissle 1917 0.60 ECOLIN_RS14195 phosphoribosylglycinamide formyltransferase 0.34 ECOLIN_RS11945 histidinol dehydrogenase — —
Escherichia coli ECRC62 0.60 BNILDI_12265 purN phosphoribosylglycinamide formyltransferase 0.33 BNILDI_14740 hisD Histidinol dehydrogenase — —
Escherichia coli BW25113 0.60 b2500 purN phosphoribosylglycinamide formyltransferase (NCBI) 0.34 b2020 hisD histidinol dehydrogenase (NCBI) 0.63 40
Escherichia coli ECRC101 0.60 OKFHMN_21805 purN phosphoribosylglycinamide formyltransferase 0.34 OKFHMN_24515 hisD Histidinol dehydrogenase — —
Enterobacter sp. TBS_079 0.60 MPMX20_03355 Phosphoribosylglycinamide formyltransferase 0.34 MPMX20_03002 Histidinol dehydrogenase 0.37 47
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF2168 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.33 GFF3912 Histidinol dehydrogenase (EC 1.1.1.23) low > 78
Escherichia coli ECRC102 0.60 NIAGMN_19575 purN phosphoribosylglycinamide formyltransferase 0.34 NIAGMN_22460 hisD Histidinol dehydrogenase — —
Escherichia coli ECRC98 0.60 JDDGAC_25750 purN phosphoribosylglycinamide formyltransferase 0.34 JDDGAC_28625 hisD Histidinol dehydrogenase — —
Escherichia coli ECRC101 0.60 MCAODC_12335 purN phosphoribosylglycinamide formyltransferase 0.34 MCAODC_20425 hisD Histidinol dehydrogenase — —
Klebsiella michiganensis M5al 0.59 BWI76_RS20970 phosphoribosylglycinamide formyltransferase 0.33 BWI76_RS18925 histidinol dehydrogenase 0.31 53
Enterobacter asburiae PDN3 0.58 EX28DRAFT_0167 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.34 EX28DRAFT_0539 histidinol dehydrogenase low > 76
Vibrio cholerae E7946 ATCC 55056 0.55 CSW01_11355 phosphoribosylglycinamide formyltransferase 0.35 CSW01_05750 histidinol dehydrogenase low > 62
Pantoea sp. MT58 0.55 IAI47_05175 phosphoribosylglycinamide formyltransferase 0.32 IAI47_07090 histidinol dehydrogenase 0.50 56
Serratia liquefaciens MT49 0.54 IAI46_18890 phosphoribosylglycinamide formyltransferase 0.31 IAI46_08210 histidinol dehydrogenase low > 86
Rahnella sp. WP5 0.53 EX31_RS22690 phosphoribosylglycinamide formyltransferase 0.34 EX31_RS11440 histidinol dehydrogenase low > 89
Shewanella amazonensis SB2B 0.53 Sama_2098 purN phosphoribosylglycinamide formyltransferase (RefSeq) 0.33 Sama_1942 hisD histidinol dehydrogenase (RefSeq) 0.64 57
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS04760 phosphoribosylglycinamide formyltransferase 0.64 RALBFv3_RS06845 histidinol dehydrogenase — —
Ralstonia solanacearum UW163 0.52 UW163_RS08910 phosphoribosylglycinamide formyltransferase 0.64 UW163_RS06770 histidinol dehydrogenase — —
Ralstonia solanacearum PSI07 0.52 RPSI07_RS12625 phosphoribosylglycinamide formyltransferase 0.64 RPSI07_RS10390 histidinol dehydrogenase — —
Shewanella sp. ANA-3 0.52 Shewana3_2546 purN phosphoribosylglycinamide formyltransferase (RefSeq) 0.34 Shewana3_1853 hisD histidinol dehydrogenase (RefSeq) 0.73 61
Ralstonia solanacearum GMI1000 0.52 RS_RS12320 phosphoribosylglycinamide formyltransferase 0.63 RS_RS14790 histidinol dehydrogenase — —
Alteromonas macleodii MIT1002 0.52 MIT1002_02220 Phosphoribosylglycinamide formyltransferase 0.33 MIT1002_02633 Histidinol dehydrogenase 0.96 35
Dickeya dianthicola ME23 0.52 DZA65_RS06415 phosphoribosylglycinamide formyltransferase 0.34 DZA65_RS10055 histidinol dehydrogenase low > 75
Dickeya dianthicola 67-19 0.52 HGI48_RS06065 phosphoribosylglycinamide formyltransferase 0.34 HGI48_RS09745 histidinol dehydrogenase low > 71
Marinobacter adhaerens HP15 0.51 HP15_1298 phosphoribosylglycinamide formyltransferase 0.73 HP15_2428 histidinol dehydrogenase 0.72 32
Shewanella oneidensis MR-1 0.51 SO2761 purN phosphoribosylglycinamide formyltransferase (NCBI ptt file) 0.34 SO2073 hisD histidinol dehydrogenase (NCBI ptt file) 0.64 43
Erwinia tracheiphila SCR3 0.51 LU632_RS08270 purN phosphoribosylglycinamide formyltransferase 0.32 LU632_RS08945 hisD histidinol dehydrogenase low > 74
Shewanella loihica PV-4 0.51 Shew_1512 phosphoribosylglycinamide formyltransferase (RefSeq) 0.34 Shew_2198 histidinol dehydrogenase (RefSeq) low > 60
Dickeya dadantii 3937 0.51 DDA3937_RS06020 phosphoribosylglycinamide formyltransferase 0.34 DDA3937_RS09735 histidinol dehydrogenase 0.61 33
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_2384 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.28 B158DRAFT_2293 histidinol dehydrogenase — —
Pectobacterium carotovorum WPP14 0.50 HER17_RS15470 phosphoribosylglycinamide formyltransferase 0.32 HER17_RS12230 histidinol dehydrogenase low > 75
Dechlorosoma suillum PS 0.50 Dsui_1545 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.66 Dsui_1411 histidinol dehydrogenase — —
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS05910 phosphoribosylglycinamide formyltransferase 0.66 HSERO_RS20345 histidinol dehydrogenase low > 78
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS00380 phosphoribosylglycinamide formyltransferase 0.63 ABZR87_RS02500 histidinol dehydrogenase — —
Rhodospirillum rubrum S1H 0.49 Rru_A2168 Phosphoribosylglycinamide formyltransferase (NCBI) 0.50 Rru_A2771 Histidinol dehydrogenase (NCBI) — —
Paraburkholderia graminis OAS925 0.49 ABIE53_003298 phosphoribosylglycinamide formyltransferase-1 0.65 ABIE53_003701 histidinol dehydrogenase — —
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS15670 phosphoribosylglycinamide formyltransferase 0.64 BPHYT_RS17710 histidinol dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS03040 phosphoribosylglycinamide formyltransferase 0.65 QEN71_RS27865 histidinol dehydrogenase 0.61 7
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS17050 phosphoribosylglycinamide formyltransferase 0.67 RR42_RS18915 histidinol dehydrogenase — —
Dinoroseobacter shibae DFL-12 0.46 Dshi_1888 phosphoribosylglycinamide formyltransferase (RefSeq) 0.46 Dshi_0979 Histidinol dehydrogenase (RefSeq) — —
Acinetobacter radioresistens SK82 0.46 MPMX26_02207 Phosphoribosylglycinamide formyltransferase 0.60 MPMX26_02587 Histidinol dehydrogenase low > 36
Castellaniella sp019104865 MT123 0.45 ABCV34_RS05225 phosphoribosylglycinamide formyltransferase 0.59 ABCV34_RS11230 histidinol dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_04075 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase 0.65 H281DRAFT_05652 histidinol dehydrogenase — —
Azospirillum sp. SherDot2 0.44 MPMX19_01305 Phosphoribosylglycinamide formyltransferase 0.47 MPMX19_05543 Histidinol dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.44 PGA1_c13270 phosphoribosylglycinamide formyltransferase PurN 0.48 PGA1_c31190 histidinol dehydrogenase HisD — —
Rhizobium sp. OAE497 0.43 ABIE40_RS06555 phosphoribosylglycinamide formyltransferase 0.46 ABIE40_RS02725 histidinol dehydrogenase 0.83 17
Sinorhizobium meliloti 1021 0.43 SMc00614 phosphoribosylglycinamide formyltransferase 0.50 SMc02307 histidinol dehydrogenase 0.87 57
Acidovorax sp. GW101-3H11 0.42 Ac3H11_1709 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.64 Ac3H11_4724 Histidinol dehydrogenase (EC 1.1.1.23) — —
Variovorax sp. SCN45 0.42 GFF6047 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.63 GFF5345 Histidinol dehydrogenase (EC 1.1.1.23) — —
Rhodanobacter denitrificans MT42 0.42 LRK55_RS12640 phosphoribosylglycinamide formyltransferase 0.32 LRK55_RS01385 histidinol dehydrogenase low > 63
Magnetospirillum magneticum AMB-1 0.42 AMB_RS14335 phosphoribosylglycinamide formyltransferase 0.50 AMB_RS16905 histidinol dehydrogenase — —
Rhodanobacter denitrificans FW104-10B01 0.42 LRK54_RS12940 phosphoribosylglycinamide formyltransferase 0.33 LRK54_RS01605 histidinol dehydrogenase 0.30 22
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF767 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.62 GFF1314 Histidinol dehydrogenase (EC 1.1.1.23) — —
Variovorax sp. OAS795 0.42 ABID97_RS07775 phosphoribosylglycinamide formyltransferase 0.63 ABID97_RS23160 histidinol dehydrogenase — —
Desulfovibrio vulgaris Hildenborough JW710 0.41 DVU0736 purN phosphoribosylglycinamide formyltransferase (TIGR) 0.42 DVU0796 hisD histidinol dehydrogenase (TIGR) low > 55
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS19860 phosphoribosylglycinamide formyltransferase 0.32 ABZR86_RS06730 histidinol dehydrogenase 0.95 15
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_02310 purN phosphoribosylglycinamide formyltransferase 0.33 OKGIIK_04950 hisD histidinol dehydrogenase low > 52
Agrobacterium fabrum C58 0.37 Atu1140 phosphoribosyalaminoimidazole-succinocarboxamide synthase 0.46 Atu0537 histidinol dehydrogenase 0.83 42
Desulfovibrio vulgaris Miyazaki F 0.36 DvMF_2769 phosphoribosylglycinamide formyltransferase (RefSeq) 0.41 DvMF_2814 hisD histidinol dehydrogenase (RefSeq) low > 51
Caulobacter crescentus NA1000 0.36 CCNA_01774 phosphoribosylglycinamide formyltransferase 0.40 CCNA_02431 histidinol dehydrogenase 0.77 5
Caulobacter crescentus NA1000 Δfur 0.36 CCNA_01774 phosphoribosylglycinamide formyltransferase 0.40 CCNA_02431 histidinol dehydrogenase low > 67
Rhodopseudomonas palustris CGA009 0.36 TX73_015790 phosphoribosylglycinamide formyltransferase 0.46 TX73_023540 histidinol dehydrogenase — —
Lysobacter sp. OAE881 0.35 ABIE51_RS15895 phosphoribosylglycinamide formyltransferase 0.34 ABIE51_RS13325 histidinol dehydrogenase 0.86 32
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.1673.1 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.36 Xcc-8004.2948.1 Histidinol dehydrogenase (EC 1.1.1.23) low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.34 A4249_RS08220 phosphoribosylglycinamide formyltransferase 0.28 A4249_RS10695 histidinol dehydrogenase low > 48
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_0229 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.45 Ga0059261_1281 histidinol dehydrogenase 0.64 33
Synechococcus elongatus PCC 7942 0.31 Synpcc7942_0958 purN phosphoribosylglycinamide formyltransferase 0.42 Synpcc7942_1519 hisD histidinol dehydrogenase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_18635 phosphoribosylglycinamide formyltransferase 0.30 CA264_05030 histidinol dehydrogenase low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.25 Echvi_1470 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.30 Echvi_2459 histidinol dehydrogenase — —
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS02710 phosphoribosylglycinamide formyltransferase 0.33 CA265_RS03635 histidinol dehydrogenase — —
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS07090 phosphoribosylglycinamide formyltransferase 0.30 HMPREF1078_RS02450 histidinol dehydrogenase low > 61
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS02435 phosphoribosylglycinamide formyltransferase 0.30 HMPREF1181_RS04860 histidinol dehydrogenase low > 56
Bacteroides ovatus ATCC 8483 0.23 BACOVA_01954 putative phosphoribosylglycinamide formyltransferase 0.30 BACOVA_01234 histidinol dehydrogenase low > 94
Mycobacterium tuberculosis H37Rv 0.23 Rv0956 Probable 5'-phosphoribosylglycinamide formyltransferase PurN (GART) (gar transformylase) (5'-phosphoribosylglycinamide transformylase) 0.30 Rv1599 Probable histidinol dehydrogenase HisD (HDH) — —
Bacteroides thetaiotaomicron VPI-5482 0.23 BT3360 phosphoribosylglycinamide formyltransferase (NCBI ptt file) 0.30 BT0201 histidinol dehydrogenase (NCBI ptt file) low > 81
Mucilaginibacter yixingensis YX-36 DSM 26809 0.23 ABZR88_RS01870 phosphoribosylglycinamide formyltransferase 0.32 ABZR88_RS06880 histidinol dehydrogenase — —
Phocaeicola dorei CL03T12C01 0.22 ABI39_RS06315 phosphoribosylglycinamide formyltransferase 0.30 ABI39_RS11835 histidinol dehydrogenase low > 72
Phocaeicola vulgatus CL09T03C04 0.22 HMPREF1058_RS10780 phosphoribosylglycinamide formyltransferase 0.30 HMPREF1058_RS15875 histidinol dehydrogenase low > 67

Not shown: 1 genomes with orthologs for Psest_1473 only; 4 genomes with orthologs for Psest_3298 only