Conservation of cofitness between PGA1_c35480 and PGA1_c03060 in Phaeobacter inhibens DSM 17395

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c35480 glycerol-3-phosphate dehydrogenase GpsA 1.0 PGA1_c03060 aspartate carbamoyltransferase PyrB 0.91 5
Dinoroseobacter shibae DFL-12 0.50 Dshi_3414 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein (RefSeq) 0.83 Dshi_3091 aspartate carbamoyltransferase (RefSeq) 0.75 11
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_2234 Glycerol-3-phosphate dehydrogenase 0.56 Ga0059261_0076 aspartate carbamoyltransferase (EC 2.1.3.2) — —
Rhizobium sp. OAE497 0.38 ABIE40_RS18055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.60 ABIE40_RS07385 aspartate carbamoyltransferase catalytic subunit — —
Sinorhizobium meliloti 1021 0.38 SMc03229 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.63 SMc01360 aspartate carbamoyltransferase catalytic subunit 0.78 21
Agrobacterium fabrum C58 0.37 Atu2650 glycerol-3-phosphate dehydrogenase 0.60 Atu1308 aspartate carbamoyl transferase catalytic subunit 0.85 23
Rhodospirillum rubrum S1H 0.37 Rru_A3571 Glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI) 0.63 Rru_A3190 Aspartate carbamoyltransferase (NCBI) low > 58
Azospirillum sp. SherDot2 0.36 MPMX19_02123 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.64 MPMX19_01054 Aspartate carbamoyltransferase 0.64 39
Azospirillum brasilense Sp245 0.36 AZOBR_RS00325 glycerol-3-phosphate dehydrogenase 0.62 AZOBR_RS20575 aspartate carbamoyltransferase 0.56 43
Rhodopseudomonas palustris CGA009 0.36 TX73_001320 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.59 TX73_016120 aspartate carbamoyltransferase catalytic subunit — —
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS15450 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.58 A4249_RS04260 aspartate carbamoyltransferase catalytic subunit — —
Kangiella aquimarina DSM 16071 0.34 B158DRAFT_0712 Glycerol-3-phosphate dehydrogenase 0.21 B158DRAFT_0021 aspartate carbamoyltransferase (EC 2.1.3.2) — —
Herbaspirillum seropedicae SmR1 0.34 HSERO_RS00795 glycerol-3-phosphate dehydrogenase 0.45 HSERO_RS02330 aspartate carbamoyltransferase low > 78
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_13015 gpsA glycerol-3-phosphate dehydrogenase 0.36 OKGIIK_11095 pyrB aspartate carbamoyltransferase catalytic subunit — —
Caulobacter crescentus NA1000 0.34 CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.54 CCNA_02525 aspartate carbamoyltransferase — —
Variovorax sp. OAS795 0.34 ABID97_RS07405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.45 ABID97_RS24660 aspartate carbamoyltransferase catalytic subunit low > 91
Caulobacter crescentus NA1000 Δfur 0.34 CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.54 CCNA_02525 aspartate carbamoyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF1222 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.42 GFF651 Aspartate carbamoyltransferase (EC 2.1.3.2) low > 90
Alteromonas macleodii MIT1002 0.34 MIT1002_00485 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.20 MIT1002_00423 Aspartate carbamoyltransferase catalytic chain low > 70
Bosea sp. OAE506 0.34 ABIE41_RS05655 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.59 ABIE41_RS17230 aspartate carbamoyltransferase catalytic subunit low > 77
Pseudomonas putida KT2440 0.34 PP_4169 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.46 PP_4998 Aspartate carbamoyltransferase — —
Acidovorax sp. GW101-3H11 0.33 Ac3H11_3860 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.45 Ac3H11_3978 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_19795 glycerol-3-phosphate dehydrogenase 0.46 AO356_13450 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5875 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.46 Pf6N2E2_4606 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Fusobacterium nucleatum SB010 0.33 HUW76_05650 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.27 HUW76_08765 aspartate carbamoyltransferase catalytic subunit — —
Mycobacterium tuberculosis H37Rv 0.33 Rv2982c Probable glycerol-3-phosphate dehydrogenase [NAD(P)+] GpdA2 (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) 0.41 Rv1380 Probable aspartate carbamoyltransferase PyrB (ATCase) (aspartate transcarbamylase) — —
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_2046 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.46 PfGW456L13_1016 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Desulfovibrio vulgaris Hildenborough JW710 0.33 DVU3159 gpsA glycerol-3-phosphate dehydrogenase (NAD(P)+) (TIGR) 0.42 DVU2901 pyrB aspartate carbamoyltransferase (TIGR) — —
Vibrio cholerae E7946 ATCC 55056 0.32 CSW01_13405 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 0.21 CSW01_12725 aspartate carbamoyltransferase — —
Lysobacter sp. OAE881 0.32 ABIE51_RS00495 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.36 ABIE51_RS16015 aspartate carbamoyltransferase catalytic subunit — —
Variovorax sp. SCN45 0.32 GFF2573 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.45 GFF2160 Aspartate carbamoyltransferase (EC 2.1.3.2) low > 127
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS13250 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.36 ABZR86_RS10390 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas sp. RS175 0.32 PFR28_03076 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.45 PFR28_04237 Aspartate carbamoyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.46 PFLU_RS28345 aspartate carbamoyltransferase — —
Pseudomonas fluorescens SBW25 0.32 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.46 PFLU_RS28345 aspartate carbamoyltransferase — —
Pseudomonas simiae WCS417 0.32 PS417_09000 glycerol-3-phosphate dehydrogenase 0.46 PS417_26700 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_01735 glycerol-3-phosphate dehydrogenase 0.46 AO353_08135 aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.46 Psyr_0482 aspartate carbamoyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.46 Psyr_0482 aspartate carbamoyltransferase — —
Shewanella loihica PV-4 0.32 Shew_3803 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.18 Shew_1013 aspartate carbamoyltransferase (RefSeq) — —
Rhodanobacter denitrificans MT42 0.31 LRK55_RS10550 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.36 LRK55_RS03990 aspartate carbamoyltransferase catalytic subunit — —
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS10860 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.36 LRK54_RS04220 aspartate carbamoyltransferase catalytic subunit — —
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.271.1 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.35 Xcc-8004.1722.1 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Pantoea sp. MT58 0.31 IAI47_00740 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.21 IAI47_16860 aspartate carbamoyltransferase — —
Serratia liquefaciens MT49 0.31 IAI46_24690 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.20 IAI46_02275 aspartate carbamoyltransferase low > 86
Shewanella amazonensis SB2B 0.31 Sama_0063 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.18 Sama_0840 aspartate carbamoyltransferase (RefSeq) — —
Dechlorosoma suillum PS 0.31 Dsui_1277 glycerol-3-phosphate dehydrogenase 0.46 Dsui_0596 aspartate carbamoyltransferase — —
Ralstonia solanacearum UW163 0.31 UW163_RS02660 glycerol-3-phosphate dehydrogenase 0.45 UW163_RS00940 aspartate carbamoyltransferase catalytic subunit — —
Erwinia tracheiphila SCR3 0.31 LU632_RS21875 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.21 LU632_RS20950 pyrB aspartate carbamoyltransferase 0.76 7
Marinobacter adhaerens HP15 0.31 HP15_1762 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.46 HP15_3507 aspartate carbamoyltransferase — —
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS10920 glycerol-3-phosphate dehydrogenase 0.45 RALBFv3_RS12625 aspartate carbamoyltransferase catalytic subunit — —
Rahnella sp. WP5 0.31 EX31_RS14340 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.20 EX31_RS12785 aspartate carbamoyltransferase 0.69 74
Shewanella oneidensis MR-1 0.31 SO0053 gpsA glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI ptt file) 0.19 SO1301 pyrB aspartate carbamoyltransferase (NCBI ptt file) — —
Acinetobacter radioresistens SK82 0.30 MPMX26_01116 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.42 MPMX26_01099 Aspartate carbamoyltransferase — —
Shewanella sp. ANA-3 0.30 Shewana3_0054 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.19 Shewana3_3070 aspartate carbamoyltransferase (RefSeq) — —
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS01845 glycerol-3-phosphate dehydrogenase 0.44 RR42_RS15860 aspartate carbamoyltransferase catalytic subunit — —
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS06770 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.45 ABZR87_RS08625 aspartate carbamoyltransferase catalytic subunit 0.59 45
Klebsiella michiganensis M5al 0.30 BWI76_RS27210 glycerol-3-phosphate dehydrogenase 0.20 BWI76_RS02995 aspartate carbamoyltransferase — —
Ralstonia solanacearum GMI1000 0.30 RS_RS01760 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 0.45 RS_RS03410 aspartate carbamoyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF402 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.20 GFF930 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Escherichia coli ECOR38 0.30 HEPCGN_14595 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.21 HEPCGN_10060 pyrB aspartate carbamoyltransferase — —
Escherichia coli BL21 0.30 ECD_03466 glycerol-3-phosphate dehydrogenase (NAD+) 0.21 ECD_04113 aspartate carbamoyltransferase, catalytic subunit — —
Escherichia coli BW25113 0.30 b3608 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (NCBI) 0.21 b4245 pyrB aspartate carbamoyltransferase catalytic subunit (NCBI) — —
Escherichia coli Nissle 1917 0.30 ECOLIN_RS20595 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.21 ECOLIN_RS24625 aspartate carbamoyltransferase — —
Escherichia coli ECRC62 0.30 BNILDI_03880 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.21 BNILDI_07385 pyrB aspartate carbamoyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_00091 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.21 OHPLBJKB_03789 Aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas stutzeri RCH2 0.30 Psest_2471 Glycerol-3-phosphate dehydrogenase 0.47 Psest_0291 aspartate carbamoyltransferase — —
Escherichia coli ECRC100 0.30 OKFHMN_15755 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.21 OKFHMN_11865 pyrB aspartate carbamoyltransferase — —
Escherichia coli ECRC102 0.30 NIAGMN_13515 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.21 NIAGMN_09715 pyrB aspartate carbamoyltransferase — —
Escherichia coli ECRC98 0.30 JDDGAC_19380 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.21 JDDGAC_15505 pyrB aspartate carbamoyltransferase — —
Escherichia coli ECOR27 0.30 NOLOHH_07635 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.21 NOLOHH_04125 pyrB aspartate carbamoyltransferase — —
Escherichia fergusonii Becca 0.30 EFB2_00202 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.21 EFB2_04288 Aspartate carbamoyltransferase catalytic subunit — —
Escherichia coli ECRC99 0.30 KEDOAH_12395 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.21 KEDOAH_16290 pyrB aspartate carbamoyltransferase — —
Escherichia coli ECRC101 0.30 MCAODC_06265 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.21 MCAODC_02370 pyrB aspartate carbamoyltransferase — —
Ralstonia solanacearum PSI07 0.29 RPSI07_RS22390 glycerol-3-phosphate dehydrogenase 0.45 RPSI07_RS20635 aspartate carbamoyltransferase catalytic subunit — —
Enterobacter asburiae PDN3 0.29 EX28DRAFT_3859 Glycerol-3-phosphate dehydrogenase 0.20 EX28DRAFT_3446 aspartate carbamoyltransferase (EC 2.1.3.2) — —
Dickeya dadantii 3937 0.29 DDA3937_RS20405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.19 DDA3937_RS01925 aspartate carbamoyltransferase — —
Dickeya dianthicola 67-19 0.29 HGI48_RS00795 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.20 HGI48_RS01900 aspartate carbamoyltransferase low > 71
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_3518 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.46 Pf1N1B4_2347 Aspartate carbamoyltransferase (EC 2.1.3.2) — —
Dickeya dianthicola ME23 0.29 DZA65_RS00850 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.20 DZA65_RS01970 aspartate carbamoyltransferase — —
Pectobacterium carotovorum WPP14 0.29 HER17_RS20735 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.21 HER17_RS19510 aspartate carbamoyltransferase low > 75
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_02000 glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.45 H281DRAFT_04817 aspartate carbamoyltransferase low > 103
Enterobacter sp. TBS_079 0.29 MPMX20_00125 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.20 MPMX20_00544 Aspartate carbamoyltransferase catalytic subunit — —
Pseudomonas sp. S08-1 0.28 OH686_00475 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.46 OH686_10940 aspartate carbamoyltransferase — —
Paraburkholderia sabiae LMG 24235 0.27 QEN71_RS01465 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.46 QEN71_RS25780 aspartate carbamoyltransferase catalytic subunit low > 153
Paraburkholderia graminis OAS925 0.27 ABIE53_000667 glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.45 ABIE53_001131 aspartate carbamoyltransferase catalytic subunit low > 113
Burkholderia phytofirmans PsJN 0.26 BPHYT_RS02610 glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.46 BPHYT_RS04235 aspartate carbamoyltransferase low > 109
Bifidobacterium breve UCC2003 0.25 BBR_RS12080 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.22 BBR_RS15425 aspartate carbamoyltransferase — —
Synechococcus elongatus PCC 7942 0.24 Synpcc7942_2522 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.37 Synpcc7942_0670 pyrB aspartate carbamoyltransferase catalytic subunit — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.22 Echvi_0322 Glycerol-3-phosphate dehydrogenase 0.40 Echvi_4661 aspartate carbamoyltransferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS16375 glycerol-3-phosphate dehydrogenase 0.42 CA265_RS14660 aspartate carbamoyltransferase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.17 ABZR88_RS01515 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.41 ABZR88_RS03460 aspartate carbamoyltransferase catalytic subunit — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.16 CA264_05630 glycerol-3-phosphate dehydrogenase 0.39 CA264_20465 aspartate carbamoyltransferase low > 74
Phocaeicola dorei CL03T12C01 0.15 ABI39_RS21145 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.19 ABI39_RS17400 aspartate carbamoyltransferase — —
Phocaeicola vulgatus CL09T03C04 0.15 HMPREF1058_RS07270 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.19 HMPREF1058_RS03820 aspartate carbamoyltransferase — —
Bacteroides stercoris CC31F 0.15 HMPREF1181_RS08570 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.19 HMPREF1181_RS14990 aspartate carbamoyltransferase — —
Bacteroides thetaiotaomicron VPI-5482 0.14 BT2123 glycerol-3-phosphate dehydrogenase (NCBI ptt file) 0.18 BT0742 aspartate carbamoyltransferase catalytic chain (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.14 BACOVA_03234 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminal domain protein 0.18 BACOVA_02450 aspartate carbamoyltransferase — —
Parabacteroides merdae CL09T00C40 0.14 HMPREF1078_RS10070 glycerol-3-phosphate dehydrogenase 0.19 HMPREF1078_RS01350 aspartate carbamoyltransferase — —

Not shown: 1 genomes with orthologs for PGA1_c35480 only; 4 genomes with orthologs for PGA1_c03060 only