Conservation of cofitness between Psest_1242 and Psest_2719 in Pseudomonas stutzeri RCH2

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1242 tRNA-guanine transglycosylase, queuosine-34-forming 1.0 Psest_2719 acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family 0.24 18
Pseudomonas sp. S08-1 0.93 OH686_17430 tRNA-guanine transglycosylase 0.81 OH686_21290 Succinylornithine transaminase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.92 Psyr_1228 tRNA-guanine transglycosylase 0.80 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_4882 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.83 PfGW456L13_1971 Succinylornithine transaminase (EC 2.6.1.81) low > 87
Pseudomonas syringae pv. syringae B728a 0.92 Psyr_1228 tRNA-guanine transglycosylase 0.80 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_15790 queuine tRNA-ribosyltransferase 0.81 AO353_03025 acetylornithine aminotransferase
Pseudomonas sp. RS175 0.92 PFR28_00277 Queuine tRNA-ribosyltransferase 0.81 PFR28_03283 Succinylornithine transaminase/acetylornithine aminotransferase low > 88
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_3006 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.81 Pf1N1B4_3440 Succinylornithine transaminase (EC 2.6.1.81) (from data) low > 87
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_3198 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.83 Pf6N2E2_5665 Succinylornithine transaminase (EC 2.6.1.81) low > 103
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_06690 queuine tRNA-ribosyltransferase 0.82 AO356_18725 acetylornithine aminotransferase 0.28 95
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS24900 tRNA guanosine(34) transglycosylase Tgt 0.81 PFLU_RS23315 aspartate aminotransferase family protein low > 109
Pseudomonas simiae WCS417 0.90 PS417_23245 queuine tRNA-ribosyltransferase 0.81 PS417_21710 Succinylornithine transaminase (EC 2.6.1.81) (from data)
Pseudomonas fluorescens SBW25 0.90 PFLU_RS24900 tRNA guanosine(34) transglycosylase Tgt 0.81 PFLU_RS23315 aspartate aminotransferase family protein low > 109
Pseudomonas putida KT2440 0.89 PP_0833 queuine tRNA-ribosyltransferase 0.82 PP_4481 Succinylornithine transaminase/acetylornithine aminotransferase low > 96
Marinobacter adhaerens HP15 0.78 HP15_1479 queuine tRNA-ribosyltransferase 0.63 HP15_3042 acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) (from data) low > 73
Alteromonas macleodii MIT1002 0.75 MIT1002_02813 Queuine tRNA-ribosyltransferase 0.65 MIT1002_00437 Succinylornithine transaminase/acetylornithine aminotransferase low > 70
Kangiella aquimarina DSM 16071 0.74 B158DRAFT_2516 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.64 B158DRAFT_2221 acetylornithine and succinylornithine transaminases/succinylornithine transaminase family low > 40
Serratia liquefaciens MT49 0.74 IAI46_04840 tRNA guanosine(34) transglycosylase Tgt 0.66 IAI46_23590 aspartate aminotransferase family protein low > 86
Enterobacter sp. TBS_079 0.73 MPMX20_00997 Queuine tRNA-ribosyltransferase 0.64 MPMX20_04262 Acetylornithine/succinyldiaminopimelate aminotransferase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF4305 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.63 GFF3710 Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) low > 78
Rahnella sp. WP5 0.73 EX31_RS22095 tRNA guanosine(34) transglycosylase Tgt 0.66 EX31_RS04630 aspartate aminotransferase family protein low > 89
Enterobacter asburiae PDN3 0.73 EX28DRAFT_2565 tRNA-guanine transglycosylase 0.63 EX28DRAFT_4170 transaminase, acetylornithine/succinylornithine family/succinylornithine transaminase family low > 76
Klebsiella michiganensis M5al 0.73 BWI76_RS06300 tRNA guanosine(34) transglycosylase Tgt 0.64 BWI76_RS26000 aspartate aminotransferase family protein
Shewanella amazonensis SB2B 0.73 Sama_2193 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.64 Sama_3011 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.73 Shewana3_1435 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.65 Shewana3_0610 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) low > 73
Acinetobacter radioresistens SK82 0.73 MPMX26_00438 Queuine tRNA-ribosyltransferase 0.61 MPMX26_02251 Succinylornithine transaminase low > 36
Dickeya dadantii 3937 0.73 DDA3937_RS05470 tRNA guanosine(34) transglycosylase Tgt 0.65 DDA3937_RS19450 aspartate aminotransferase family protein low > 74
Dickeya dianthicola 67-19 0.72 HGI48_RS05530 tRNA guanosine(34) transglycosylase Tgt 0.66 HGI48_RS19570 aspartate aminotransferase family protein low > 71
Dickeya dianthicola ME23 0.72 DZA65_RS05855 tRNA guanosine(34) transglycosylase Tgt 0.65 DZA65_RS20655 aspartate aminotransferase family protein low > 75
Shewanella oneidensis MR-1 0.72 SO3113 tgt queuine tRNA-ribosyltransferase (NCBI ptt file) 0.65 SO0617 argD acetylornithine aminotransferase (NCBI ptt file) low > 76
Escherichia coli ECRC98 0.72 JDDGAC_12160 tgt tRNA guanosine(34) transglycosylase Tgt 0.64 JDDGAC_20860 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase
Escherichia coli ECOR38 0.72 HEPCGN_07145 tgt tRNA guanosine(34) transglycosylase Tgt 0.64 HEPCGN_16055 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase low > 85
Escherichia coli ECOR27 0.72 NOLOHH_01440 tgt tRNA guanosine(34) transglycosylase Tgt 0.64 NOLOHH_09030 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase low > 57
Escherichia coli ECRC99 0.72 KEDOAH_19460 tgt tRNA guanosine(34) transglycosylase Tgt 0.64 KEDOAH_10910 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase
Escherichia coli BW25113 0.72 b0406 tgt queuine tRNA-ribosyltransferase (NCBI) 0.64 b3359 argD bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase (NCBI) low > 76
Escherichia coli ECRC102 0.72 NIAGMN_06560 tgt tRNA guanosine(34) transglycosylase Tgt 0.64 NIAGMN_15000 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_03270 Queuine tRNA-ribosyltransferase 0.64 OHPLBJKB_00343 Acetylornithine/succinyldiaminopimelate aminotransferase low > 73
Shewanella loihica PV-4 0.72 Shew_2337 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.64 Shew_0578 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) low > 60
Escherichia coli ECRC101 0.72 OKFHMN_08505 tgt tRNA guanosine(34) transglycosylase Tgt 0.64 OKFHMN_17230 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase
Escherichia fergusonii Becca 0.72 EFB2_03651 Queuine tRNA-ribosyltransferase 0.64 EFB2_00463 Acetylornithine/succinyldiaminopimelate aminotransferase low > 86
Escherichia coli Nissle 1917 0.72 ECOLIN_RS02445 tRNA guanosine(34) transglycosylase Tgt 0.64 ECOLIN_RS19240 bifunctional acetylornithine/succinyldiaminopimelate transaminase
Escherichia coli ECRC62 0.72 BNILDI_22855 tgt tRNA guanosine(34) transglycosylase Tgt 0.64 BNILDI_02490 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase
Escherichia coli ECRC101 0.72 MCAODC_27730 tgt tRNA guanosine(34) transglycosylase Tgt 0.64 MCAODC_07760 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase
Escherichia coli BL21 0.72 ECD_00354 tRNA-guanine transglycosylase 0.64 ECD_03210 bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase low > 60
Pectobacterium carotovorum WPP14 0.72 HER17_RS15990 tRNA guanosine(34) transglycosylase Tgt 0.67 HER17_RS01910 aspartate aminotransferase family protein low > 75
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_03850 tRNA guanosine(34) transglycosylase Tgt 0.65 CSW01_13250 aspartate aminotransferase family protein low > 62
Pantoea sp. MT58 0.71 IAI47_14805 tRNA guanosine(34) transglycosylase Tgt 0.63 IAI47_01955 aspartate aminotransferase family protein low > 76
Erwinia tracheiphila SCR3 0.70 LU632_RS18500 tgt tRNA guanosine(34) transglycosylase Tgt 0.64 LU632_RS22810 aspartate aminotransferase family protein low > 74
Lysobacter sp. OAE881 0.69 ABIE51_RS15020 tRNA guanosine(34) transglycosylase Tgt 0.45 ABIE51_RS17420 acetylornithine/succinyldiaminopimelate transaminase low > 62
Dechlorosoma suillum PS 0.68 Dsui_3323 tRNA-guanine transglycosylase, queuosine-34-forming 0.35 Dsui_0023 acetylornithine/succinylornithine aminotransferase low > 51
Xanthomonas campestris pv. campestris strain 8004 0.67 Xcc-8004.2168.1 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.43 Xcc-8004.1117.1 hypothetical protein low > 74
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS09540 tRNA guanosine(34) transglycosylase Tgt 0.42 ABZR86_RS17400 acetylornithine transaminase low > 74
Rhodanobacter denitrificans MT42 0.65 LRK55_RS02880 tRNA guanosine(34) transglycosylase Tgt 0.45 LRK55_RS06335 acetylornithine/succinylornithine family transaminase low > 63
Rhodanobacter denitrificans FW104-10B01 0.65 LRK54_RS03130 tRNA guanosine(34) transglycosylase Tgt 0.43 LRK54_RS06590 acetylornithine/succinylornithine family transaminase low > 59
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_10000 tgt tRNA guanosine(34) transglycosylase Tgt 0.42 OKGIIK_17070 astC acetylornithine transaminase low > 52
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS06175 queuine tRNA-ribosyltransferase 0.34 HSERO_RS16670 acetylornithine aminotransferase
Castellaniella sp019104865 MT123 0.64 ABCV34_RS15365 tRNA guanosine(34) transglycosylase Tgt 0.33 ABCV34_RS12095 acetylornithine transaminase
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS17400 queuine tRNA-ribosyltransferase 0.31 RR42_RS16955 acetylornithine aminotransferase
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS26640 tRNA guanosine(34) transglycosylase Tgt 0.62 QEN71_RS23375 aspartate aminotransferase family protein
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF2798 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.32 GFF3420 Acetylornithine aminotransferase (EC 2.6.1.11) low > 90
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS01280 tRNA guanosine(34) transglycosylase Tgt 0.31 ABZR87_RS00285 acetylornithine transaminase low > 80
Paraburkholderia bryophila 376MFSha3.1 0.60 H281DRAFT_04670 tRNA-guanine transglycosylase 0.63 H281DRAFT_06478 succinylornithine aminotransferase apoenzyme low > 103
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS03410 queuine tRNA-ribosyltransferase 0.63 BPHYT_RS07695 acetylornithine aminotransferase
Acidovorax sp. GW101-3H11 0.60 Ac3H11_861 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.32 Ac3H11_1332 Acetylornithine aminotransferase (EC 2.6.1.11)
Ralstonia solanacearum GMI1000 0.60 RS_RS13575 tRNA guanosine(34) transglycosylase Tgt 0.31 RS_RS12225 aspartate aminotransferase family protein
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS05685 tRNA guanosine(34) transglycosylase Tgt 0.31 RALBFv3_RS04665 acetylornithine transaminase
Ralstonia solanacearum UW163 0.59 UW163_RS07940 tRNA guanosine(34) transglycosylase Tgt 0.31 UW163_RS09005 acetylornithine transaminase
Variovorax sp. SCN45 0.59 GFF5534 Queuine tRNA-ribosyltransferase (EC 2.4.2.29) 0.32 GFF3927 N-acetylornithine aminotransferase (EC 2.6.1.11)
Variovorax sp. OAS795 0.59 ABID97_RS01595 tRNA guanosine(34) transglycosylase Tgt 0.32 ABID97_RS08635 aspartate aminotransferase family protein
Ralstonia solanacearum PSI07 0.58 RPSI07_RS11615 tRNA guanosine(34) transglycosylase Tgt 0.32 RPSI07_RS12720 acetylornithine transaminase
Rhodospirillum rubrum S1H 0.54 Rru_A0280 Queuine tRNA-ribosyltransferase (NCBI) 0.40 Rru_A3277 Acetylornithine and succinylornithine aminotransferase (NCBI) low > 58
Phaeobacter inhibens DSM 17395 0.54 PGA1_c20570 queuine tRNA-ribosyltransferase Tgt 0.40 PGA1_c24230 acetylornithine aminotransferase ArgD low > 62
Azospirillum sp. SherDot2 0.53 MPMX19_01697 Queuine tRNA-ribosyltransferase 0.40 MPMX19_02177 Succinylornithine transaminase/acetylornithine aminotransferase low > 112
Dinoroseobacter shibae DFL-12 0.53 Dshi_2346 queuine tRNA-ribosyltransferase (RefSeq) 0.39 Dshi_0798 acetylornithine and succinylornithine aminotransferase (RefSeq)
Magnetospirillum magneticum AMB-1 0.52 AMB_RS03090 tRNA guanosine(34) transglycosylase Tgt 0.42 AMB_RS01605 aspartate aminotransferase family protein low > 64
Desulfovibrio vulgaris Miyazaki F 0.52 DvMF_2757 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.36 DvMF_3149 acetylornithine aminotransferase (RefSeq) low > 51
Azospirillum brasilense Sp245 0.51 AZOBR_RS06295 queuine tRNA-ribosyltransferase 0.39 AZOBR_RS19025 acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] (from data)
Sphingomonas koreensis DSMZ 15582 0.51 Ga0059261_1017 tRNA-guanine transglycosylase 0.38 Ga0059261_3205 transaminase, acetylornithine/succinylornithine family low > 68
Desulfovibrio vulgaris Hildenborough JW710 0.51 DVU0726 tgt queuine tRNA-ribosyltransferase (TIGR) 0.37 DVU2347 argD acetylornithine aminotransferase (TIGR) low > 55
Rhizobium sp. OAE497 0.51 ABIE40_RS09435 tRNA guanosine(34) transglycosylase Tgt 0.41 ABIE40_RS02320 aspartate aminotransferase family protein low > 107
Sinorhizobium meliloti 1021 0.51 SMc01206 queuine tRNA-ribosyltransferase 0.39 SMc02138 acetylornithine transaminase 0.64 13
Bosea sp. OAE506 0.50 ABIE41_RS18290 tRNA guanosine(34) transglycosylase Tgt 0.44 ABIE41_RS04340 aspartate aminotransferase family protein
Caulobacter crescentus NA1000 0.50 CCNA_01659 queuine tRNA-ribosyltransferase 0.40 CCNA_00620 acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_01659 queuine tRNA-ribosyltransferase 0.40 CCNA_00620 acetylornithine aminotransferase/succinyldiaminopimelate aminotransferase low > 67
Agrobacterium fabrum C58 0.49 Atu1677 queuine tRNA-ribosyltransferase 0.43 Atu0428 acetylornithine aminotransferase
Rhodopseudomonas palustris CGA009 0.49 TX73_013485 tRNA guanosine(34) transglycosylase Tgt 0.42 TX73_024810 aspartate aminotransferase family protein
Brevundimonas sp. GW460-12-10-14-LB2 0.49 A4249_RS02905 tRNA guanosine(34) transglycosylase Tgt 0.35 A4249_RS11925 aspartate aminotransferase family protein
Mucilaginibacter yixingensis YX-36 DSM 26809 0.45 ABZR88_RS13980 tRNA guanosine(34) transglycosylase Tgt 0.25 ABZR88_RS18040 aspartate aminotransferase family protein low > 71
Echinicola vietnamensis KMM 6221, DSM 17526 0.45 Echvi_2049 tRNA-guanine transglycosylase, queuosine-34-forming 0.27 Echvi_0577 Ornithine aminotransferase (EC 2.6.1.13) (from data) 0.32 77
Pontibacter actiniarum KMM 6156, DSM 19842 0.44 CA264_00655 tRNA-guanine(34) transglycosylase 0.28 CA264_15645 ornithine--oxo-acid transaminase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.44 CA265_RS13030 tRNA guanosine(34) transglycosylase Tgt 0.25 CA265_RS15205 aspartate aminotransferase family protein 0.86 1
Parabacteroides merdae CL09T00C40 0.44 HMPREF1078_RS01080 tRNA guanosine(34) transglycosylase Tgt 0.26 HMPREF1078_RS12615 ornithine--oxo-acid transaminase low > 61
Synechococcus elongatus PCC 7942 0.43 Synpcc7942_0455 tgt queuine tRNA-ribosyltransferase 0.41 Synpcc7942_0943 argD acetylornithine aminotransferase
Bacteroides stercoris CC31F 0.43 HMPREF1181_RS14345 tRNA guanosine(34) transglycosylase Tgt 0.24 HMPREF1181_RS03445 aspartate aminotransferase family protein low > 56
Phocaeicola dorei CL03T12C01 0.43 ABI39_RS16515 tRNA guanosine(34) transglycosylase Tgt 0.26 ABI39_RS11290 ornithine--oxo-acid transaminase low > 72
Phocaeicola vulgatus CL09T03C04 0.43 HMPREF1058_RS01215 tRNA guanosine(34) transglycosylase Tgt 0.26 HMPREF1058_RS15260 ornithine--oxo-acid transaminase low > 67
Bacteroides thetaiotaomicron VPI-5482 0.41 BT0835 tRNA-guanine transglycosylase (NCBI ptt file) 0.25 BT3758 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data)
Bacteroides ovatus ATCC 8483 0.41 BACOVA_02570 tRNA-guanine transglycosylase 0.25 BACOVA_03588 aminotransferase, class III low > 94
Bifidobacterium breve UCC2003 0.33 BBR_RS10715 tRNA-guanine(34) transglycosylase 0.29 BBR_RS13900 acetylornithine transaminase low > 34

Not shown: 1 genomes with orthologs for Psest_1242 only; 4 genomes with orthologs for Psest_2719 only