Conservation of cofitness between HP15_1832 and HP15_1834 in Marinobacter adhaerens HP15

97 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_1832 3-isopropylmalate dehydrogenase 1.0 HP15_1834 protein containing 3-isopropylmalate dehydratase, large subunit region domain 0.97 1
Pseudomonas putida KT2440 0.74 PP_1988 3-isopropylmalate dehydrogenase 0.79 PP_1985 3-isopropylmalate dehydratase large subunit 0.94 1
Acinetobacter radioresistens SK82 0.73 MPMX26_00348 3-isopropylmalate dehydrogenase 0.75 MPMX26_00345 3-isopropylmalate dehydratase large subunit 1.00 1
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.80 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.89 15
Pseudomonas simiae WCS417 0.72 PS417_18585 3-isopropylmalate dehydrogenase 0.78 PS417_18600 isopropylmalate isomerase 0.94 3
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_21415 3-isopropylmalate dehydrogenase 0.80 AO356_21400 isopropylmalate isomerase 0.97 2
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.78 PFLU_RS20580 3-isopropylmalate dehydratase large subunit 0.97 1
Pseudomonas fluorescens SBW25 0.72 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.78 PFLU_RS20580 3-isopropylmalate dehydratase large subunit 0.92 2
Pseudomonas sp. RS175 0.72 PFR28_02821 3-isopropylmalate dehydrogenase 0.80 PFR28_02824 3-isopropylmalate dehydratase large subunit 0.89 1
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.79 PfGW456L13_3948 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.99 2
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.79 Pf1N1B4_15 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.93 3
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_20635 3-isopropylmalate dehydrogenase 0.79 AO353_20620 isopropylmalate isomerase 0.98 4
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_1985 3-isopropylmalate dehydrogenase 0.78 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.96 2
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_1985 3-isopropylmalate dehydrogenase 0.78 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.97 1
Kangiella aquimarina DSM 16071 0.71 B158DRAFT_1322 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.79 B158DRAFT_1319 3-isopropylmalate dehydratase, large subunit 0.97 1
Pseudomonas stutzeri RCH2 0.70 Psest_2589 3-isopropylmalate dehydrogenase 0.79 Psest_2591 3-isopropylmalate dehydratase, large subunit 0.95 1
Pseudomonas sp. S08-1 0.70 OH686_04470 3-isopropylmalate dehydrogenase 0.81 OH686_04480 3-isopropylmalate dehydratase large subunit 0.89 10
Xanthomonas campestris pv. campestris strain 8004 0.70 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.79 Xcc-8004.1049.1 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.97 2
Dechlorosoma suillum PS 0.68 Dsui_3198 3-isopropylmalate dehydrogenase 0.72 Dsui_3201 3-isopropylmalate dehydratase, large subunit
Castellaniella sp019104865 MT123 0.65 ABCV34_RS04280 3-isopropylmalate dehydrogenase 0.72 ABCV34_RS04290 3-isopropylmalate dehydratase large subunit 0.74 1
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS14385 3-isopropylmalate dehydrogenase 0.72 RR42_RS14400 isopropylmalate isomerase 0.96 1
Ralstonia solanacearum GMI1000 0.65 RS_RS09990 3-isopropylmalate dehydrogenase 0.73 RS_RS10000 3-isopropylmalate dehydratase large subunit 0.42 36
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS14530 3-isopropylmalate dehydrogenase 0.74 ABZR87_RS14540 3-isopropylmalate dehydratase large subunit 0.93 6
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS17620 3-isopropylmalate dehydrogenase 0.73 QEN71_RS17605 3-isopropylmalate dehydratase large subunit 0.93 1
Ralstonia solanacearum UW163 0.64 UW163_RS11115 3-isopropylmalate dehydrogenase 0.73 UW163_RS11105 3-isopropylmalate dehydratase large subunit
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS02610 3-isopropylmalate dehydrogenase 0.73 RALBFv3_RS02620 3-isopropylmalate dehydratase large subunit 0.66 3
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_06072 3-isopropylmalate dehydrogenase 0.73 H281DRAFT_06075 3-isopropylmalate dehydratase, large subunit 0.88 1
Paraburkholderia graminis OAS925 0.64 ABIE53_004804 3-isopropylmalate dehydrogenase 0.73 ABIE53_004801 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit 0.97 2
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS16500 3-isopropylmalate dehydrogenase 0.72 HSERO_RS16515 isopropylmalate isomerase 0.96 2
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS33900 3-isopropylmalate dehydrogenase 0.73 BPHYT_RS33915 isopropylmalate isomerase 0.97 1
Ralstonia solanacearum PSI07 0.64 RPSI07_RS14705 3-isopropylmalate dehydrogenase 0.74 RPSI07_RS14695 3-isopropylmalate dehydratase large subunit 0.80 4
Acidovorax sp. GW101-3H11 0.63 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.69 Ac3H11_1525 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.98 2
Variovorax sp. SCN45 0.63 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.69 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.71 1
Variovorax sp. OAS795 0.63 ABID97_RS08455 3-isopropylmalate dehydrogenase 0.70 ABID97_RS08465 3-isopropylmalate dehydratase large subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.69 GFF3363 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.97 2
Synechococcus elongatus PCC 7942 0.61 Synpcc7942_1505 leuB 3-isopropylmalate dehydrogenase 0.46 Synpcc7942_1898 leuC isopropylmalate isomerase large subunit
Magnetospirillum magneticum AMB-1 0.58 AMB_RS20570 3-isopropylmalate dehydrogenase 0.64 AMB_RS20560 3-isopropylmalate dehydratase large subunit
Sphingomonas koreensis DSMZ 15582 0.58 Ga0059261_3190 3-isopropylmalate dehydrogenase 0.58 Ga0059261_4223 3-isopropylmalate dehydratase, large subunit 0.97 11
Phaeobacter inhibens DSM 17395 0.57 PGA1_c29830 3-isopropylmalate dehydrogenase LeuB 0.61 PGA1_c29780 3-isopropylmalate dehydratase large subunit 0.98 1
Dinoroseobacter shibae DFL-12 0.57 Dshi_0081 3-isopropylmalate dehydrogenase (RefSeq) 0.60 Dshi_0085 3-isopropylmalate dehydratase, large subunit (RefSeq)
Agrobacterium fabrum C58 0.57 Atu2791 3-isopropylmalate dehydrogenase 0.64 Atu2709 3-isopropylmalate dehydratase, large subunit 0.99 1
Azospirillum sp. SherDot2 0.57 MPMX19_00607 3-isopropylmalate dehydrogenase 0.66 MPMX19_01998 3-isopropylmalate dehydratase large subunit 0.93 6
Rhizobium sp. OAE497 0.57 ABIE40_RS19050 3-isopropylmalate dehydrogenase 0.64 ABIE40_RS18380 3-isopropylmalate dehydratase large subunit 0.99 1
Sinorhizobium meliloti 1021 0.56 SMc04405 3-isopropylmalate dehydrogenase 0.66 SMc03823 isopropylmalate isomerase large subunit 0.99 2
Azospirillum brasilense Sp245 0.56 AZOBR_RS14130 3-isopropylmalate dehydrogenase 0.66 AZOBR_RS03545 isopropylmalate isomerase 0.89 2
Rhodospirillum rubrum S1H 0.56 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI) 0.68 Rru_A1189 3-isopropylmalate dehydratase large subunit region (NCBI) 0.95 1
Bosea sp. OAE506 0.55 ABIE41_RS11860 3-isopropylmalate dehydrogenase 0.64 ABIE41_RS11660 3-isopropylmalate dehydratase large subunit
Serratia liquefaciens MT49 0.54 IAI46_03350 3-isopropylmalate dehydrogenase 0.59 IAI46_03345 3-isopropylmalate dehydratase large subunit 0.81 1
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_00193 3-isopropylmalate dehydrogenase 0.62 CCNA_00196 3-isopropylmalate dehydratase large subunit low > 67
Klebsiella michiganensis M5al 0.54 BWI76_RS04675 3-isopropylmalate dehydrogenase 0.60 BWI76_RS04670 3-isopropylmalate dehydratase large subunit 0.95 4
Caulobacter crescentus NA1000 0.54 CCNA_00193 3-isopropylmalate dehydrogenase 0.62 CCNA_00196 3-isopropylmalate dehydratase large subunit 1.00 1
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.53 GFF165 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.61 GFF166 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 78
Escherichia fergusonii Becca 0.53 EFB2_03972 3-isopropylmalate dehydrogenase 0.61 EFB2_03973 3-isopropylmalate dehydratase large subunit low > 86
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_12600 3-isopropylmalate dehydrogenase 0.60 CSW01_12605 3-isopropylmalate dehydratase large subunit low > 62
Escherichia coli ECRC99 0.53 KEDOAH_17435 leuB 3-isopropylmalate dehydrogenase 0.62 KEDOAH_17430 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC101 0.53 MCAODC_01235 leuB 3-isopropylmalate dehydrogenase 0.62 MCAODC_01240 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC98 0.53 JDDGAC_14315 leuB 3-isopropylmalate dehydrogenase 0.62 JDDGAC_14320 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC102 0.53 NIAGMN_08570 leuB 3-isopropylmalate dehydrogenase 0.62 NIAGMN_08575 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC101 0.53 OKFHMN_10720 leuB 3-isopropylmalate dehydrogenase 0.62 OKFHMN_10725 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli Nissle 1917 0.53 ECOLIN_RS00395 3-isopropylmalate dehydrogenase 0.62 ECOLIN_RS00390 3-isopropylmalate dehydratase large subunit low > 52
Escherichia coli ECOR38 0.53 HEPCGN_08700 leuB 3-isopropylmalate dehydrogenase 0.62 HEPCGN_08705 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 85
Escherichia coli ECOR27 0.53 NOLOHH_03065 leuA 2-isopropylmalate synthase 0.62 NOLOHH_03070 leuC1 3-isopropylmalate dehydratase large subunit 1 low > 57
Dickeya dianthicola ME23 0.53 DZA65_RS19205 3-isopropylmalate dehydrogenase 0.62 DZA65_RS19210 3-isopropylmalate dehydratase large subunit 0.98 1
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_03584 3-isopropylmalate dehydrogenase 0.61 OHPLBJKB_03585 3-isopropylmalate dehydratase large subunit low > 73
Enterobacter sp. TBS_079 0.53 MPMX20_00768 3-isopropylmalate dehydrogenase 0.61 MPMX20_00767 3-isopropylmalate dehydratase large subunit 1 0.98 1
Escherichia coli BL21 0.53 ECD_00075 3-isopropylmalate dehydrogenase, NAD(+)-dependent 0.62 ECD_00074 3-isopropylmalate dehydratase large subunit 0.78 12
Escherichia coli ECRC62 0.53 BNILDI_08545 leuA 2-isopropylmalate synthase 0.62 BNILDI_08540 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli BW25113 0.53 b0073 leuB 3-isopropylmalate dehydrogenase (VIMSS) 0.62 b0072 leuC isopropylmalate isomerase large subunit (NCBI) 0.99 1
Dickeya dianthicola 67-19 0.53 HGI48_RS18060 3-isopropylmalate dehydrogenase 0.62 HGI48_RS18065 3-isopropylmalate dehydratase large subunit 0.89 4
Dickeya dadantii 3937 0.53 DDA3937_RS18120 3-isopropylmalate dehydrogenase 0.62 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit 0.97 1
Rahnella sp. WP5 0.53 EX31_RS03685 3-isopropylmalate dehydrogenase 0.62 EX31_RS03690 3-isopropylmalate dehydratase large subunit 0.99 1
Enterobacter asburiae PDN3 0.53 EX28DRAFT_3669 3-isopropylmalate dehydrogenase 0.61 EX28DRAFT_3668 3-isopropylmalate dehydratase, large subunit 0.97 1
Rhodopseudomonas palustris CGA009 0.53 TX73_001175 3-isopropylmalate dehydrogenase 0.62 TX73_001245 3-isopropylmalate dehydratase large subunit
Pectobacterium carotovorum WPP14 0.53 HER17_RS03080 3-isopropylmalate dehydrogenase 0.61 HER17_RS03075 3-isopropylmalate dehydratase large subunit 0.98 4
Shewanella loihica PV-4 0.52 Shew_3471 3-isopropylmalate dehydrogenase (RefSeq) 0.59 Shew_3470 isopropylmalate isomerase large subunit (RefSeq) 0.99 1
Alteromonas macleodii MIT1002 0.52 MIT1002_00948 3-isopropylmalate dehydrogenase 0.58 MIT1002_00947 3-isopropylmalate dehydratase large subunit 0.99 1
Pantoea sp. MT58 0.52 IAI47_16005 3-isopropylmalate dehydrogenase 0.62 IAI47_16010 3-isopropylmalate dehydratase large subunit 0.98 2
Shewanella sp. ANA-3 0.51 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) 0.58 Shewana3_3759 isopropylmalate isomerase large subunit (RefSeq) 0.98 3
Shewanella oneidensis MR-1 0.51 SO4235 leuB 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.58 SO4234 leuC 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) 0.99 3
Shewanella amazonensis SB2B 0.51 Sama_0336 3-isopropylmalate dehydrogenase (RefSeq) 0.58 Sama_0337 isopropylmalate isomerase large subunit (RefSeq) 0.99 1
Erwinia tracheiphila SCR3 0.49 LU632_RS02875 leuB 3-isopropylmalate dehydrogenase 0.57 LU632_RS02870 leuC 3-isopropylmalate dehydratase large subunit 0.97 1
Pedobacter sp. GW460-11-11-14-LB5 0.49 CA265_RS15850 3-isopropylmalate dehydrogenase 0.51 CA265_RS15830 3-isopropylmalate dehydratase large subunit 0.96 2
Mucilaginibacter yixingensis YX-36 DSM 26809 0.49 ABZR88_RS11605 3-isopropylmalate dehydrogenase 0.52 ABZR88_RS11595 3-isopropylmalate dehydratase large subunit
Lysobacter sp. OAE881 0.47 ABIE51_RS17585 3-isopropylmalate dehydrogenase 0.49 ABIE51_RS17575 3-isopropylmalate dehydratase large subunit 0.95 40
Brevundimonas sp. GW460-12-10-14-LB2 0.45 A4249_RS09995 3-isopropylmalate dehydrogenase 0.48 A4249_RS10005 3-isopropylmalate dehydratase large subunit 0.99 11
Rhodanobacter denitrificans MT42 0.44 LRK55_RS09965 3-isopropylmalate dehydrogenase 0.63 LRK55_RS07105 3-isopropylmalate dehydratase large subunit low > 63
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase 0.46 OKGIIK_13585 leuC 3-isopropylmalate dehydratase large subunit 0.47 19
Rhodanobacter denitrificans FW104-10B01 0.43 LRK54_RS10325 3-isopropylmalate dehydrogenase 0.63 LRK54_RS07375 3-isopropylmalate dehydratase large subunit low > 59
Pontibacter actiniarum KMM 6156, DSM 19842 0.43 CA264_09445 3-isopropylmalate dehydrogenase 0.52 CA264_09435 3-isopropylmalate dehydratase large subunit low > 74
Parabacteroides merdae CL09T00C40 0.42 HMPREF1078_RS16640 3-isopropylmalate dehydrogenase 0.52 HMPREF1078_RS16660 3-isopropylmalate dehydratase large subunit 0.98 1
Bacteroides stercoris CC31F 0.41 HMPREF1181_RS14125 3-isopropylmalate dehydrogenase 0.52 HMPREF1181_RS14145 3-isopropylmalate dehydratase large subunit 0.98 1
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS14565 3-isopropylmalate dehydrogenase 0.51 HMPREF1058_RS14550 3-isopropylmalate dehydratase large subunit 0.96 1
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS10215 3-isopropylmalate dehydrogenase 0.51 ABI39_RS10200 3-isopropylmalate dehydratase large subunit 0.93 1
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS15950 3-isopropylmalate dehydrogenase 0.48 ABZR86_RS15960 3-isopropylmalate dehydratase large subunit 0.98 1
Bacteroides thetaiotaomicron VPI-5482 0.41 BT1857 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.51 BT1860 3-isopropylmalate dehydratase large subunit (NCBI ptt file) 0.94 1
Bacteroides ovatus ATCC 8483 0.40 BACOVA_04600 3-isopropylmalate dehydrogenase 0.51 BACOVA_04603 3-isopropylmalate dehydratase, large subunit 0.99 1
Methanococcus maripaludis JJ 0.30 MMJJ_RS02220 3-isopropylmalate dehydrogenase 0.22 MMJJ_RS08425 3-isopropylmalate dehydratase large subunit
Methanococcus maripaludis S2 0.29 MMP_RS02855 3-isopropylmalate dehydrogenase 0.22 MMP_RS05930 3-isopropylmalate dehydratase large subunit

Not shown: 3 genomes with orthologs for HP15_1832 only; 2 genomes with orthologs for HP15_1834 only