Conservation of cofitness between CSW01_00265 and CSW01_01015 in Vibrio cholerae E7946 ATCC 55056

106 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00265 5-(carboxyamino)imidazole ribonucleotide mutase 1.0 CSW01_01015 DNA helicase II 0.46 12
Marinobacter adhaerens HP15 0.74 HP15_2349 phosphoribosylaminoimidazole carboxylase catalytic subunit 0.56 HP15_3403 UvrD/REP helicase
Pseudomonas sp. S08-1 0.68 OH686_13375 N5-carboxyaminoimidazole ribonucleotide mutase 0.59 OH686_13045 ATP-dependent DNA helicase UvrD/PcrA
Shewanella amazonensis SB2B 0.67 Sama_1064 phosphoribosylaminoimidazole carboxylase (RefSeq) 0.66 Sama_0419 uvrD DNA-dependent helicase II (RefSeq) low > 62
Pseudomonas segetis P6 0.67 MPMX49_00155 N5-carboxyaminoimidazole ribonucleotide mutase 0.58 MPMX49_00180 DNA helicase II
Pseudomonas aeruginosa PA14 0.66 IKLFDK_26295 N5-carboxyaminoimidazole ribonucleotide mutase 0.60 IKLFDK_26200 DNA helicase II low > 100
Pseudomonas sp. DMC3 0.66 GFF486 N5-carboxyaminoimidazole ribonucleotide mutase 0.59 GFF512 DNA helicase II
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_09940 N5-carboxyaminoimidazole ribonucleotide mutase 0.59 AO353_10055 DNA helicase II
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_11080 N5-carboxyaminoimidazole ribonucleotide mutase 0.59 AO356_11990 DNA helicase II
Pseudomonas sp. RS175 0.66 PFR28_04496 N5-carboxyaminoimidazole ribonucleotide mutase 0.59 PFR28_04523 DNA helicase II
Pseudomonas fluorescens FW300-N1B4 0.66 Pf1N1B4_2027 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) 0.59 Pf1N1B4_2005 ATP-dependent DNA helicase UvrD/PcrA
Pseudomonas fluorescens GW456-L13 0.66 PfGW456L13_746 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) 0.59 PfGW456L13_724 ATP-dependent DNA helicase UvrD/PcrA
Pseudomonas fluorescens SBW25 0.66 PFLU_RS29805 5-(carboxyamino)imidazole ribonucleotide mutase 0.59 PFLU_RS29900 DNA helicase II
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS29805 5-(carboxyamino)imidazole ribonucleotide mutase 0.59 PFLU_RS29900 DNA helicase II
Pseudomonas lactucae CFBP13502 0.66 GEMAOFIL_00090 N5-carboxyaminoimidazole ribonucleotide mutase 0.59 GEMAOFIL_00116 DNA helicase II
Magnetospirillum magneticum AMB-1 0.65 AMB_RS11145 5-(carboxyamino)imidazole ribonucleotide mutase 0.34 AMB_RS03725 DNA helicase II
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_5048 5-(carboxyamino)imidazole ribonucleotide mutase 0.58 Psyr_5065 ATP-dependent DNA helicase UvrD
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_5048 5-(carboxyamino)imidazole ribonucleotide mutase 0.58 Psyr_5065 ATP-dependent DNA helicase UvrD
Pseudomonas sp. SVBP6 0.64 COO64_RS01750 purE 5-(carboxyamino)imidazole ribonucleotide mutase 0.60 COO64_RS01845 uvrD DNA helicase II
Pseudomonas sp. BP01 0.64 JOY50_RS08820 purE 5-(carboxyamino)imidazole ribonucleotide mutase 0.60 JOY50_RS08735 uvrD DNA helicase II
Pseudomonas putida KT2440 0.64 PP_5336 N5-carboxyaminoimidazole ribonucleotide mutase 0.60 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex
Sphingobium sp. HT1-2 0.64 GFF1299 N5-carboxyaminoimidazole ribonucleotide mutase (EC 5.4.99.18) 0.36 GFF1640 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) low > 95
Brevundimonas sp. GW460-12-10-14-LB2 0.64 A4249_RS08940 5-(carboxyamino)imidazole ribonucleotide mutase 0.32 A4249_RS04960 UvrD-helicase domain-containing protein
Pseudomonas stutzeri RCH2 0.63 Psest_4069 phosphoribosylaminoimidazole carboxylase, PurE protein 0.59 Psest_4098 Superfamily I DNA and RNA helicases
Azospirillum brasilense Sp245 0.62 AZOBR_RS06145 N5-carboxyaminoimidazole ribonucleotide mutase 0.35 AZOBR_RS12445 DNA helicase II
Azospirillum sp. SherDot2 0.62 MPMX19_01417 N5-carboxyaminoimidazole ribonucleotide mutase 0.34 MPMX19_01610 ATP-dependent DNA helicase PcrA
Rhodanobacter sp000427505 FW510-R12 0.61 LRK53_RS14790 5-(carboxyamino)imidazole ribonucleotide mutase 0.53 LRK53_RS01560 UvrD-helicase domain-containing protein
Shewanella sp. ANA-3 0.61 Shewana3_3155 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq) 0.67 Shewana3_0469 uvrD DNA-dependent helicase II (RefSeq) low > 73
Shewanella oneidensis MR-1 0.60 SO3554 purE phosphoribosylaminoimidazole carboxylase, catalytic subunit (NCBI ptt file) 0.67 SO0467 uvrD DNA helicase II (NCBI ptt file) low > 76
Methylophilus sp. DMC18 0.60 GFF1768 N5-carboxyaminoimidazole ribonucleotide mutase 0.48 GFF1664 DNA helicase II
Rhodanobacter denitrificans MT42 0.59 LRK55_RS13525 5-(carboxyamino)imidazole ribonucleotide mutase 0.54 LRK55_RS06595 DNA helicase II
Rhodanobacter denitrificans FW104-10B01 0.59 LRK54_RS13810 5-(carboxyamino)imidazole ribonucleotide mutase 0.54 LRK54_RS06850 DNA helicase II
Sphingomonas koreensis DSMZ 15582 0.58 Ga0059261_1427 phosphoribosylaminoimidazole carboxylase, PurE protein 0.35 Ga0059261_0249 Superfamily I DNA and RNA helicases
Shewanella loihica PV-4 0.58 Shew_1248 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq) 0.66 Shew_3385 uvrD DNA-dependent helicase II (RefSeq)
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS09835 5-(carboxyamino)imidazole ribonucleotide mutase 0.55 ABZR86_RS16965 DNA helicase II
Klebsiella pneumoniae MKP103 0.58 KDGMDA_15005 5-(carboxyamino)imidazole ribonucleotide mutase 0.71 KDGMDA_09710 DNA helicase II low > 95
Kangiella aquimarina DSM 16071 0.58 B158DRAFT_0611 5-(carboxyamino)imidazole ribonucleotide mutase 0.58 B158DRAFT_0238 Superfamily I DNA and RNA helicases
Rhodanobacter sp. FW510-T8 0.57 OKGIIK_03045 purE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 0.55 OKGIIK_16775 DNA helicase
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_4082 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) 0.59 Pf6N2E2_4273 ATP-dependent DNA helicase UvrD/PcrA
Rhodospirillum rubrum S1H 0.56 Rru_A1050 Phosphoribosylaminoimidazole carboxylase (NCBI) 0.32 Rru_A1536 UvrD/REP helicase (NCBI)
Klebsiella michiganensis M5al 0.54 BWI76_RS07070 5-(carboxyamino)imidazole ribonucleotide mutase 0.71 BWI76_RS01220 DNA-dependent helicase II low > 92
Phaeobacter inhibens DSM 17395 0.54 PGA1_c24860 phosphoribosylaminoimidazole carboxylase catalytic subunit PurE 0.34 PGA1_c09450 DNA helicase II UvrD low > 62
Alteromonas macleodii MIT1002 0.53 MIT1002_00521 N5-carboxyaminoimidazole ribonucleotide mutase 0.65 MIT1002_00153 DNA helicase II low > 70
Bosea sp. OAE506 0.53 ABIE41_RS09240 5-(carboxyamino)imidazole ribonucleotide mutase 0.35 ABIE41_RS12730 UvrD-helicase domain-containing protein
Escherichia coli ECRC62 0.52 BNILDI_22255 purE N5-carboxyaminoimidazole ribonucleotide mutase 0.71 BNILDI_04995 uvrD DNA helicase II low > 75
Escherichia coli BL21 0.52 ECD_00473 N5-carboxyaminoimidazole ribonucleotide mutase 0.71 ECD_03689 DNA-dependent ATPase I and helicase II
Escherichia fergusonii Becca 0.52 EFB2_03539 N5-carboxyaminoimidazole ribonucleotide mutase 0.71 EFB2_04824 DNA helicase II low > 86
Escherichia coli ECRC98 0.52 JDDGAC_11485 purE N5-carboxyaminoimidazole ribonucleotide mutase 0.71 JDDGAC_18035 uvrD DNA helicase II low > 87
Escherichia coli ECOR38 0.52 HEPCGN_06475 purE N5-carboxyaminoimidazole ribonucleotide mutase 0.71 HEPCGN_13115 uvrD DNA helicase II low > 88
Escherichia coli ECRC102 0.52 NIAGMN_05890 purE N5-carboxyaminoimidazole ribonucleotide mutase 0.71 NIAGMN_12165 uvrD DNA helicase II low > 80
Escherichia coli ECRC99 0.52 KEDOAH_20135 purE N5-carboxyaminoimidazole ribonucleotide mutase 0.71 KEDOAH_13740 uvrD DNA helicase II
Escherichia coli ECRC100 0.52 OKFHMN_07835 purE N5-carboxyaminoimidazole ribonucleotide mutase 0.71 OKFHMN_14410 uvrD DNA helicase II low > 79
Escherichia coli BW25113 0.52 b0523 purE phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) 0.71 b3813 uvrD DNA-dependent ATPase I and helicase II (NCBI) low > 76
Escherichia coli ECRC101 0.52 MCAODC_27055 purE N5-carboxyaminoimidazole ribonucleotide mutase 0.71 MCAODC_04915 uvrD DNA helicase II low > 88
Escherichia coli ECOR27 0.52 NOLOHH_00825 purE N5-carboxyaminoimidazole ribonucleotide mutase 0.71 NOLOHH_06540 uvrD DNA helicase II low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_03158 N5-carboxyaminoimidazole ribonucleotide mutase 0.71 OHPLBJKB_04237 DNA helicase II low > 74
Escherichia coli Nissle 1917 0.52 ECOLIN_RS03030 5-(carboxyamino)imidazole ribonucleotide mutase 0.71 ECOLIN_RS21885 DNA helicase II
Sinorhizobium meliloti 1021 0.52 SMc04001 phosphoribosylaminoimidazole carboxylase catalytic subunit protein 0.31 SMc01461 DNA helicase II protein low > 103
Echinicola vietnamensis KMM 6221, DSM 17526 0.52 Echvi_0885 phosphoribosylaminoimidazole carboxylase, PurE protein 0.33 Echvi_0292 Superfamily I DNA and RNA helicases
Serratia liquefaciens MT49 0.52 IAI46_05375 5-(carboxyamino)imidazole ribonucleotide mutase 0.71 IAI46_00735 DNA helicase II low > 86
Dickeya dianthicola ME23 0.52 DZA65_RS15990 5-(carboxyamino)imidazole ribonucleotide mutase 0.70 DZA65_RS21080 DNA helicase II low > 75
Erwinia tracheiphila SCR3 0.52 LU632_RS15245 purE 5-(carboxyamino)imidazole ribonucleotide mutase 0.68 LU632_RS24125 uvrD DNA helicase II
Erwinia tracheiphila HP pepo 2.2 0.52 IJEDHG_01020 purE 5-(carboxyamino)imidazole ribonucleotide mutase 0.68 IJEDHG_08770 uvrD DNA helicase II
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF4439 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) 0.71 GFF241 ATP-dependent DNA helicase UvrD/PcrA low > 78
Enterobacter asburiae PDN3 0.51 EX28DRAFT_2459 phosphoribosylaminoimidazole carboxylase, PurE protein 0.70 EX28DRAFT_4482 ATP-dependent DNA helicase UvrD (EC 3.6.1.-)
Rahnella sp. WP5 0.51 EX31_RS22625 5-(carboxyamino)imidazole ribonucleotide mutase 0.68 EX31_RS15175 DNA helicase II low > 89
Dickeya dadantii 3937 0.51 DDA3937_RS15105 5-(carboxyamino)imidazole ribonucleotide mutase 0.70 DDA3937_RS19880 DNA helicase II
Rhizobium sp. OAE497 0.51 ABIE40_RS16065 5-(carboxyamino)imidazole ribonucleotide mutase 0.33 ABIE40_RS11670 UvrD-helicase domain-containing protein
Pantoea agglomerans CFBP13505 P0401 0.51 PagCFBP13505_RS10860 5-(carboxyamino)imidazole ribonucleotide mutase 0.68 PagCFBP13505_RS15370 DNA helicase II
Enterobacter sp. TBS_079 0.51 MPMX20_01098 N5-carboxyaminoimidazole ribonucleotide mutase 0.70 MPMX20_04463 DNA helicase II low > 85
Pectobacterium carotovorum WPP14 0.51 HER17_RS06475 5-(carboxyamino)imidazole ribonucleotide mutase 0.70 HER17_RS01360 DNA helicase II low > 75
Pontibacter actiniarum KMM 6156, DSM 19842 0.51 CA264_12595 5-(carboxyamino)imidazole ribonucleotide mutase 0.31 CA264_07795 ATP-dependent DNA helicase
Pantoea sp. MT58 0.50 IAI47_14350 5-(carboxyamino)imidazole ribonucleotide mutase 0.69 IAI47_18390 DNA helicase II low > 76
Pedobacter sp. GW460-11-11-14-LB5 0.50 CA265_RS07740 5-(carboxyamino)imidazole ribonucleotide mutase 0.31 CA265_RS12980 ATP-dependent DNA helicase
Erwinia amylovora T8 0.50 OLJFJH_17630 5-(carboxyamino)imidazole ribonucleotide mutase 0.68 OLJFJH_06425 DNA helicase II low > 58
Mycobacterium tuberculosis H37Rv 0.50 Rv3275c Probable phosphoribosylaminoimidazole carboxylase catalytic subunit PurE (air carboxylase) (AIRC) 0.33 Rv0949 Probable ATP-dependent DNA helicase II UvrD1
Dickeya dianthicola 67-19 0.50 HGI48_RS15185 5-(carboxyamino)imidazole ribonucleotide mutase 0.70 HGI48_RS20035 DNA helicase II low > 71
Synechocystis sp000284455 PCC 6803 0.50 SGL_RS16805 5-(carboxyamino)imidazole ribonucleotide mutase 0.30 SGL_RS06660 DNA helicase PcrA
Dechlorosoma suillum PS 0.49 Dsui_0092 phosphoribosylaminoimidazole carboxylase, PurE protein 0.45 Dsui_1227 DNA/RNA helicase, superfamily I
Mucilaginibacter yixingensis YX-36 DSM 26809 0.48 ABZR88_RS09285 5-(carboxyamino)imidazole ribonucleotide mutase 0.31 ABZR88_RS07840 ATP-dependent helicase
Xanthomonas campestris pv. campestris strain 8004 0.48 Xcc-8004.2011.1 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) 0.54 Xcc-8004.5114.1 ATP-dependent DNA helicase UvrD/PcrA low > 74
Variovorax sp. SCN45 0.47 GFF5512 N5-carboxyaminoimidazole ribonucleotide mutase (EC 5.4.99.18) 0.43 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) low > 127
Lysobacter sp. OAE881 0.47 ABIE51_RS15395 5-(carboxyamino)imidazole ribonucleotide mutase 0.55 ABIE51_RS01985 DNA helicase II
Dinoroseobacter shibae DFL-12 0.46 Dshi_0681 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq) 0.33 Dshi_2483 UvrD/REP helicase (RefSeq)
Variovorax sp. OAS795 0.45 ABID97_RS01705 5-(carboxyamino)imidazole ribonucleotide mutase 0.44 ABID97_RS09150 UvrD-helicase domain-containing protein
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS02445 5-(carboxyamino)imidazole ribonucleotide mutase 0.44 QEN71_RS05110 3'-5' exonuclease
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS03365 N5-carboxyaminoimidazole ribonucleotide mutase 0.43 HSERO_RS02160 DNA-dependent helicase
Cellulophaga baltica 18 0.44 M666_RS01275 5-(carboxyamino)imidazole ribonucleotide mutase 0.30 M666_RS15390 3'-5' exonuclease
Castellaniella sp019104865 MT123 0.44 ABCV34_RS00560 5-(carboxyamino)imidazole ribonucleotide mutase 0.42 ABCV34_RS05210 UvrD-helicase domain-containing protein
Paraburkholderia graminis OAS925 0.43 ABIE53_003424 5-(carboxyamino)imidazole ribonucleotide mutase 0.45 ABIE53_002936 DNA helicase-2/ATP-dependent DNA helicase PcrA
Ralstonia solanacearum PSI07 0.43 RPSI07_RS21135 5-(carboxyamino)imidazole ribonucleotide mutase 0.42 RPSI07_RS13455 DNA-dependent helicase
Ralstonia solanacearum GMI1000 0.43 RS_RS02880 5-(carboxyamino)imidazole ribonucleotide mutase 0.42 RS_RS11220 DNA-dependent helicase
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS12195 5-(carboxyamino)imidazole ribonucleotide mutase 0.42 RALBFv3_RS03775 DNA-dependent helicase
Fusobacterium nucleatum SB010 0.43 HUW76_05160 5-(carboxyamino)imidazole ribonucleotide mutase 0.29 HUW76_07175 UvrD-helicase domain-containing protein low > 35
Ralstonia solanacearum UW163 0.43 UW163_RS01415 5-(carboxyamino)imidazole ribonucleotide mutase 0.42 UW163_RS09895 DNA-dependent helicase
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_04186 5-(carboxyamino)imidazole ribonucleotide mutase 0.44 H281DRAFT_04469 ATP-dependent DNA helicase UvrD
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS16250 N5-carboxyaminoimidazole ribonucleotide mutase 0.45 BPHYT_RS13840 DNA-dependent helicase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF2771 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) 0.42 GFF5598 ATP-dependent DNA helicase UvrD/PcrA
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS08085 5-(carboxyamino)imidazole ribonucleotide mutase 0.43 ABZR87_RS15705 UvrD-helicase domain-containing protein
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS12490 5-(carboxyamino)imidazole ribonucleotide mutase 0.30 HMPREF1058_RS03305 UvrD-helicase domain-containing protein low > 67
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS04245 5-(carboxyamino)imidazole ribonucleotide mutase 0.30 ABI39_RS17735 UvrD-helicase domain-containing protein
Parabacteroides merdae CL09T00C40 0.41 HMPREF1078_RS05935 5-(carboxyamino)imidazole ribonucleotide mutase 0.31 HMPREF1078_RS03560 3'-5' exonuclease low > 61
Bacteroides stercoris CC31F 0.41 HMPREF1181_RS00940 5-(carboxyamino)imidazole ribonucleotide mutase 0.29 HMPREF1181_RS16505 UvrD-helicase domain-containing protein low > 56
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS03225 N5-carboxyaminoimidazole ribonucleotide mutase 0.44 RR42_RS15090 DNA helicase
Bacteroides ovatus ATCC 8483 0.40 BACOVA_01613 phosphoribosylaminoimidazole carboxylase, catalytic subunit 0.31 BACOVA_02365 UvrD/REP helicase
Desulfovibrio vulgaris Miyazaki F 0.34 DvMF_1723 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq) 0.17 DvMF_1967 UvrD/REP helicase (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.31 DVU0487 purE phosphoribosylaminoimidazole carboxylase, catalytic subunit (TIGR) 0.19 DVU0156 pcrA ATP-dependent DNA helicase, UvrD/REP family (TIGR)

Not shown: 11 genomes with orthologs for CSW01_00265 only; 3 genomes with orthologs for CSW01_01015 only