Conservation of cofitness between CCNA_00528 and CCNA_03853 in Caulobacter crescentus NA1000

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Caulobacter crescentus NA1000 1.0 CCNA_00528 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) 1.0 CCNA_03853 imidazole glycerol phosphate synthase, cyclase subunit 0.94 12
Caulobacter crescentus NA1000 Δfur 1.00 CCNA_00528 pyrroline-5-carboxylate reductase 1.00 CCNA_03853 imidazole glycerol phosphate synthase, cyclase subunit low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS09840 pyrroline-5-carboxylate reductase dimerization domain-containing protein 0.42 A4249_RS10715 imidazole glycerol phosphate synthase subunit HisF 0.97 40
Rhodopseudomonas palustris CGA009 0.33 TX73_022630 pyrroline-5-carboxylate reductase 0.63 TX73_001625 imidazole glycerol phosphate synthase subunit HisF
Agrobacterium fabrum C58 0.32 Atu2209 pyrroline-5-carboxylate reductase 0.64 Atu0039 imidazoleglycerol-phosphate synthase cyclase 0.49 78
Magnetospirillum magneticum AMB-1 0.31 AMB_RS02820 pyrroline-5-carboxylate reductase 0.67 AMB_RS22925 imidazole glycerol phosphate synthase cyclase subunit
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_3321 pyrroline-5-carboxylate reductase 0.62 Ga0059261_1048 imidazoleglycerol phosphate synthase, cyclase subunit low > 68
Pseudomonas fluorescens SBW25 0.30 PFLU_RS28375 pyrroline-5-carboxylate reductase 0.58 PFLU_RS01625 imidazole glycerol phosphate synthase subunit HisF
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS28375 pyrroline-5-carboxylate reductase 0.58 PFLU_RS01625 imidazole glycerol phosphate synthase subunit HisF
Dechlorosoma suillum PS 0.30 Dsui_0602 pyrroline-5-carboxylate reductase 0.61 Dsui_1418 imidazoleglycerol phosphate synthase, cyclase subunit
Pseudomonas simiae WCS417 0.30 PS417_26730 pyrroline-5-carboxylate reductase 0.58 PS417_01580 imidazole glycerol phosphate synthase 0.54 25
Pseudomonas sp. RS175 0.29 PFR28_04243 Pyrroline-5-carboxylate reductase 0.58 PFR28_04933 Imidazole glycerol phosphate synthase subunit HisF
Pseudomonas sp. S08-1 0.29 OH686_10980 pyrroline-5-carboxylate reductase 0.57 OH686_14595 Imidazole glycerol phosphate synthase cyclase subunit 0.57 62
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_08165 pyrroline-5-carboxylate reductase 0.58 AO353_12090 imidazole glycerol phosphate synthase subunit HisF 0.60 46
Azospirillum sp. SherDot2 0.29 MPMX19_01399 Pyrroline-5-carboxylate reductase 0.67 MPMX19_02542 Imidazole glycerol phosphate synthase subunit HisF
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS17360 pyrroline-5-carboxylate reductase 0.61 RR42_RS18885 imidazole glycerol phosphate synthase
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_2341 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.58 Pf1N1B4_1623 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Pseudomonas stutzeri RCH2 0.28 Psest_0283 pyrroline-5-carboxylate reductase 0.57 Psest_0156 imidazoleglycerol phosphate synthase, cyclase subunit
Rhodospirillum rubrum S1H 0.28 Rru_A3281 Delta 1-pyrroline-5-carboxylate reductase (NCBI) 0.65 Rru_A3594 Histidine biosynthesis protein HisF (NCBI)
Rhizobium sp. OAE497 0.28 ABIE40_RS13005 pyrroline-5-carboxylate reductase 0.64 ABIE40_RS19440 imidazole glycerol phosphate synthase subunit HisF 0.69 38
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_1010 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.58 PfGW456L13_358 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.85 34
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_13420 pyrroline-5-carboxylate reductase 0.58 AO356_09795 imidazole glycerol phosphate synthase subunit HisF
Paraburkholderia graminis OAS925 0.28 ABIE53_000840 pyrroline-5-carboxylate reductase 0.61 ABIE53_003695 cyclase
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS26600 pyrroline-5-carboxylate reductase 0.62 QEN71_RS27835 imidazole glycerol phosphate synthase subunit HisF 0.94 15
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS03490 pyrroline-5-carboxylate reductase 0.61 BPHYT_RS17680 imidazole glycerol phosphate synthase subunit HisF
Sinorhizobium meliloti 1021 0.28 SMc02677 pyrroline-5-carboxylate reductase 0.66 SMc02569 imidazole glycerol phosphate synthase subunit HisF 0.57 73
Pseudomonas putida KT2440 0.27 PP_5095 pyrroline-5-carboxylate reductase 0.58 PP_0293 Imidazole glycerol phosphate synthase subunit HisF 0.40 42
Ralstonia solanacearum PSI07 0.27 RPSI07_RS11720 pyrroline-5-carboxylate reductase 0.61 RPSI07_RS10420 imidazole glycerol phosphate synthase subunit HisF
Acidovorax sp. GW101-3H11 0.27 Ac3H11_788 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.57 Ac3H11_4733 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Herbaspirillum seropedicae SmR1 0.27 HSERO_RS18990 pyrroline-5-carboxylate reductase 0.61 HSERO_RS20315 imidazole glycerol phosphate synthase 0.81 9
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_4600 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.58 Pf6N2E2_3838 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Ralstonia solanacearum IBSBF1503 0.27 RALBFv3_RS05580 pyrroline-5-carboxylate reductase 0.62 RALBFv3_RS06815 imidazole glycerol phosphate synthase subunit HisF
Ralstonia solanacearum UW163 0.27 UW163_RS08045 pyrroline-5-carboxylate reductase 0.62 UW163_RS06800 imidazole glycerol phosphate synthase subunit HisF
Azospirillum brasilense Sp245 0.27 AZOBR_RS06245 pyrroline-5-carboxylate reductase 0.67 AZOBR_RS01685 imidazole glycerol phosphate synthase
Phaeobacter inhibens DSM 17395 0.26 PGA1_c24700 pyrroline-5-carboxylate reductase ProC 0.64 PGA1_c09240 imidazole glycerol phosphate synthase subunit HisF
Dinoroseobacter shibae DFL-12 0.26 Dshi_2645 pyrroline-5-carboxylate reductase (RefSeq) 0.68 Dshi_2576 imidazoleglycerol phosphate synthase, cyclase subunit (RefSeq)
Paraburkholderia bryophila 376MFSha3.1 0.26 H281DRAFT_04679 pyrroline-5-carboxylate reductase 0.61 H281DRAFT_05659 imidazole glycerol phosphate synthase subunit hisF
Ralstonia solanacearum GMI1000 0.26 RS_RS13440 pyrroline-5-carboxylate reductase 0.61 RS_RS14760 imidazole glycerol phosphate synthase subunit HisF
Variovorax sp. OAS795 0.26 ABID97_RS01555 pyrroline-5-carboxylate reductase 0.62 ABID97_RS23105 imidazole glycerol phosphate synthase subunit HisF
Castellaniella sp019104865 MT123 0.26 ABCV34_RS03610 pyrroline-5-carboxylate reductase 0.59 ABCV34_RS11250 imidazole glycerol phosphate synthase subunit HisF low > 48
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_0476 pyrroline-5-carboxylate reductase 0.58 Psyr_4893 imidazole glycerol phosphate synthase subunit hisF
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_0476 pyrroline-5-carboxylate reductase 0.58 Psyr_4893 imidazole glycerol phosphate synthase subunit hisF
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS01230 pyrroline-5-carboxylate reductase 0.62 ABZR87_RS02470 imidazole glycerol phosphate synthase subunit HisF
Lysobacter sp. OAE881 0.25 ABIE51_RS16065 pyrroline-5-carboxylate reductase 0.43 ABIE51_RS13300 imidazole glycerol phosphate synthase subunit HisF low > 62
Dyella japonica UNC79MFTsu3.2 0.25 ABZR86_RS10425 pyrroline-5-carboxylate reductase 0.38 ABZR86_RS06705 imidazole glycerol phosphate synthase subunit HisF 0.91 10
Klebsiella michiganensis M5al 0.24 BWI76_RS06170 pyrroline-5-carboxylate reductase 0.41 BWI76_RS18950 imidazole glycerol phosphate synthase cyclase subunit
Enterobacter sp. TBS_079 0.24 MPMX20_00976 Pyrroline-5-carboxylate reductase 0.42 MPMX20_03007 Imidazole glycerol phosphate synthase subunit HisF 0.90 9
Bosea sp. OAE506 0.24 ABIE41_RS11365 pyrroline-5-carboxylate reductase 0.62 ABIE41_RS03810 imidazole glycerol phosphate synthase subunit HisF
Enterobacter asburiae PDN3 0.24 EX28DRAFT_2585 pyrroline-5-carboxylate reductase 0.41 EX28DRAFT_0534 imidazoleglycerol phosphate synthase, cyclase subunit 0.67 21
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF2806 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.61 GFF1309 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-)
Marinobacter adhaerens HP15 0.24 HP15_287 pyrroline-5-carboxylate reductase 0.59 HP15_3009 protein containing histidine biosynthesis, HisF domain
Variovorax sp. SCN45 0.23 GFF5553 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.61 GFF5357 Imidazole glycerol phosphate synthase cyclase subunit
Escherichia coli BL21 0.23 ECD_00333 pyrroline-5-carboxylate reductase, NAD(P)-binding 0.42 ECD_01927 imidazole glycerol phosphate synthase, catalytic subunit with HisH
Alteromonas macleodii MIT1002 0.23 MIT1002_03062 Pyrroline-5-carboxylate reductase 0.41 MIT1002_02638 Imidazole glycerol phosphate synthase subunit HisF 0.96 23
Escherichia coli ECOR27 0.23 NOLOHH_01535 proC pyrroline-5-carboxylate reductase 0.42 NOLOHH_15805 hisF Imidazole glycerol phosphate synthase subunit HisF low > 57
Escherichia coli ECRC102 0.23 NIAGMN_06665 proC pyrroline-5-carboxylate reductase 0.42 NIAGMN_22435 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli Nissle 1917 0.23 ECOLIN_RS02345 pyrroline-5-carboxylate reductase 0.42 ECOLIN_RS11970 imidazole glycerol phosphate synthase subunit HisF low > 52
Escherichia coli ECRC101 0.23 MCAODC_27835 proC pyrroline-5-carboxylate reductase 0.42 MCAODC_20450 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli ECRC62 0.23 BNILDI_22950 proC pyrroline-5-carboxylate reductase 0.42 BNILDI_14715 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli ECRC98 0.23 JDDGAC_12265 proC pyrroline-5-carboxylate reductase 0.42 JDDGAC_28600 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli ECRC101 0.23 OKFHMN_08610 proC pyrroline-5-carboxylate reductase 0.42 OKFHMN_24490 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_03288 Pyrroline-5-carboxylate reductase 0.42 OHPLBJKB_01675 Imidazole glycerol phosphate synthase subunit HisF low > 73
Escherichia coli ECOR38 0.23 HEPCGN_07250 proC pyrroline-5-carboxylate reductase 0.42 HEPCGN_03195 hisF Imidazole glycerol phosphate synthase subunit HisF low > 85
Escherichia coli ECRC99 0.23 KEDOAH_19355 proC pyrroline-5-carboxylate reductase 0.42 KEDOAH_03660 hisF Imidazole glycerol phosphate synthase subunit HisF
Escherichia coli BW25113 0.23 b0386 proC pyrroline-5-carboxylate reductase (NCBI) 0.42 b2025 hisF imidazole glycerol phosphate synthase subunit HisF (NCBI) 0.86 18
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_0197 pyrroline-5-carboxylate reductase 0.46 B158DRAFT_2291 imidazoleglycerol phosphate synthase, cyclase subunit low > 40
Escherichia fergusonii Becca 0.23 EFB2_03670 Pyrroline-5-carboxylate reductase 0.42 EFB2_01831 Imidazole glycerol phosphate synthase subunit HisF low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF4283 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.42 GFF3907 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) low > 78
Synechococcus elongatus PCC 7942 0.22 Synpcc7942_2058 proC pyrroline-5-carboxylate reductase 0.57 Synpcc7942_2087 hisF imidazole glycerol phosphate synthase subunit HisF
Erwinia tracheiphila SCR3 0.22 LU632_RS18995 proC pyrroline-5-carboxylate reductase 0.41 LU632_RS08920 hisF imidazole glycerol phosphate synthase subunit HisF 0.54 72
Vibrio cholerae E7946 ATCC 55056 0.22 CSW01_02450 pyrroline-5-carboxylate reductase 0.42 CSW01_05775 imidazole glycerol phosphate synthase cyclase subunit low > 62
Acinetobacter radioresistens SK82 0.22 MPMX26_00572 Pyrroline-5-carboxylate reductase 0.57 MPMX26_02854 Imidazole glycerol phosphate synthase subunit HisF 0.69 31
Dickeya dadantii 3937 0.22 DDA3937_RS17305 pyrroline-5-carboxylate reductase 0.42 DDA3937_RS09710 imidazole glycerol phosphate synthase subunit HisF 0.70 22
Shewanella amazonensis SB2B 0.21 Sama_2478 pyrroline-5-carboxylate reductase (RefSeq) 0.39 Sama_1947 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.94 25
Pantoea sp. MT58 0.21 IAI47_14945 pyrroline-5-carboxylate reductase 0.42 IAI47_07065 imidazole glycerol phosphate synthase subunit HisF 0.84 19
Rahnella sp. WP5 0.21 EX31_RS02690 pyrroline-5-carboxylate reductase 0.42 EX31_RS11465 imidazole glycerol phosphate synthase subunit HisF 0.97 19
Serratia liquefaciens MT49 0.20 IAI46_21415 pyrroline-5-carboxylate reductase 0.43 IAI46_08185 imidazole glycerol phosphate synthase subunit HisF low > 86
Rhodanobacter denitrificans FW104-10B01 0.20 LRK54_RS04260 pyrroline-5-carboxylate reductase 0.38 LRK54_RS01580 imidazole glycerol phosphate synthase subunit HisF low > 59
Rhodanobacter denitrificans MT42 0.20 LRK55_RS04030 pyrroline-5-carboxylate reductase 0.39 LRK55_RS01360 imidazole glycerol phosphate synthase subunit HisF
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.1710.1 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.41 Xcc-8004.2943.1 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 0.58 26
Dickeya dianthicola 67-19 0.20 HGI48_RS17350 pyrroline-5-carboxylate reductase 0.42 HGI48_RS09720 imidazole glycerol phosphate synthase subunit HisF
Dickeya dianthicola ME23 0.20 DZA65_RS18440 pyrroline-5-carboxylate reductase 0.42 DZA65_RS10030 imidazole glycerol phosphate synthase subunit HisF
Desulfovibrio vulgaris Miyazaki F 0.19 DvMF_3161 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) 0.49 DvMF_2304 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.91 14
Rhodanobacter sp. FW510-T8 0.19 OKGIIK_11135 proC pyrroline-5-carboxylate reductase 0.37 OKGIIK_04975 hisF imidazole glycerol phosphate synthase subunit HisF low > 52
Shewanella sp. ANA-3 0.19 Shewana3_1193 pyrroline-5-carboxylate reductase (RefSeq) 0.39 Shewana3_1848 imidazole glycerol phosphate synthase subunit HisF (RefSeq) 0.93 24
Shewanella oneidensis MR-1 0.19 SO3354 proC pyrroline-5-carboxylate reductase (NCBI ptt file) 0.39 SO2068 hisF hisF protein (cyclase) (NCBI ptt file) 0.98 6
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_2635 pyrroline-5-carboxylate reductase 0.47 Echvi_2516 imidazoleglycerol phosphate synthase, cyclase subunit 0.70 38
Pectobacterium carotovorum WPP14 0.18 HER17_RS03805 pyrroline-5-carboxylate reductase 0.42 HER17_RS12255 imidazole glycerol phosphate synthase subunit HisF
Pontibacter actiniarum KMM 6156, DSM 19842 0.18 CA264_07730 pyrroline-5-carboxylate reductase 0.50 CA264_05110 imidazole glycerol phosphate synthase cyclase subunit low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.18 ABZR88_RS09865 pyrroline-5-carboxylate reductase 0.47 ABZR88_RS06855 imidazole glycerol phosphate synthase subunit HisF 0.75 24
Phocaeicola vulgatus CL09T03C04 0.18 HMPREF1058_RS08830 pyrroline-5-carboxylate reductase 0.53 HMPREF1058_RS06175 imidazole glycerol phosphate synthase subunit HisF 0.92 19
Desulfovibrio vulgaris Hildenborough JW710 0.18 DVU2332 proC pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) 0.48 DVU0286 hisF imidazoleglycerol phosphate synthase, cyclase subunit (TIGR) 0.82 23
Phocaeicola dorei CL03T12C01 0.17 ABI39_RS02960 pyrroline-5-carboxylate reductase 0.53 ABI39_RS19930 imidazole glycerol phosphate synthase subunit HisF 0.80 25
Bacteroides ovatus ATCC 8483 0.17 BACOVA_03587 pyrroline-5-carboxylate reductase 0.52 BACOVA_00219 imidazoleglycerol phosphate synthase, cyclase subunit 0.85 41
Parabacteroides merdae CL09T00C40 0.15 HMPREF1078_RS10620 pyrroline-5-carboxylate reductase 0.49 HMPREF1078_RS13565 imidazole glycerol phosphate synthase subunit HisF 0.95 33
Bacteroides stercoris CC31F 0.15 HMPREF1181_RS03440 pyrroline-5-carboxylate reductase 0.49 HMPREF1181_RS11070 imidazole glycerol phosphate synthase subunit HisF 0.95 15
Mycobacterium tuberculosis H37Rv 0.15 Rv0500 Probable pyrroline-5-carboxylate reductase ProC (P5CR) (P5C reductase) 0.55 Rv1605 Probable cyclase HisF
Bacteroides thetaiotaomicron VPI-5482 0.15 BT3757 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) 0.51 BT1378 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) 0.81 42
Bifidobacterium breve UCC2003 0.14 BBR_RS14625 pyrroline-5-carboxylate reductase 0.50 BBR_RS16095 imidazole glycerol phosphate synthase subunit HisF low > 34

Not shown: 1 genomes with orthologs for CCNA_00528 only; 3 genomes with orthologs for CCNA_03853 only