| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Klebsiella michiganensis M5al | 1.0 | BWI76_RS04665 | | 3-isopropylmalate dehydratase small subunit | 1.0 | BWI76_RS11840 | | tryptophan synthase subunit alpha | 0.93 | 18 |
| Enterobacter sp. TBS_079 | 0.93 | MPMX20_00766 | | 3-isopropylmalate dehydratase small subunit 1 | 0.86 | MPMX20_02514 | | Tryptophan synthase alpha chain | 0.92 | 15 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.93 | GFF167 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.84 | GFF2726 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.92 | EX28DRAFT_3667 | | 3-isopropylmalate dehydratase, small subunit | 0.86 | EX28DRAFT_0932 | | tryptophan synthase, alpha chain (EC 4.2.1.20) | low | > 76 |
| Escherichia coli ECOR27 | 0.88 | NOLOHH_03075 | leuD | 3-isopropylmalate dehydratase small subunit | 0.85 | NOLOHH_20335 | trpA | tryptophan synthase subunit alpha | 0.86 | 41 |
| Escherichia coli ECRC62 | 0.88 | BNILDI_08535 | leuD | 3-isopropylmalate dehydratase small subunit | 0.85 | BNILDI_18480 | trpA | tryptophan synthase subunit alpha | 0.88 | 60 |
| Escherichia coli BL21 | 0.88 | ECD_00073 | | 3-isopropylmalate dehydratase small subunit | 0.85 | ECD_01234 | | tryptophan synthase, alpha subunit | low | > 61 |
| Escherichia coli BW25113 | 0.88 | b0071 | leuD | isopropylmalate isomerase small subunit (NCBI) | 0.85 | b1260 | trpA | tryptophan synthase subunit alpha (NCBI) | 0.91 | 34 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.88 | OHPLBJKB_03586 | | 3-isopropylmalate dehydratase small subunit | 0.85 | OHPLBJKB_02423 | | Tryptophan synthase alpha chain | low | > 73 |
| Escherichia coli ECOR38 | 0.88 | HEPCGN_08710 | leuD | 3-isopropylmalate dehydratase small subunit | 0.84 | HEPCGN_25515 | trpA | tryptophan synthase subunit alpha | 0.84 | 64 |
| Escherichia fergusonii Becca | 0.88 | EFB2_03974 | | 3-isopropylmalate dehydratase small subunit | 0.84 | EFB2_02666 | | Tryptophan synthase alpha chain | low | > 86 |
| Escherichia coli Nissle 1917 | 0.88 | ECOLIN_RS00385 | | 3-isopropylmalate dehydratase small subunit | 0.85 | ECOLIN_RS07595 | | tryptophan synthase subunit alpha | — | — |
| Escherichia coli ECRC101 | 0.87 | MCAODC_01245 | leuD | 3-isopropylmalate dehydratase small subunit | 0.85 | MCAODC_15590 | trpA | tryptophan synthase subunit alpha | 0.84 | 49 |
| Escherichia coli ECRC102 | 0.87 | NIAGMN_08580 | leuD | 3-isopropylmalate dehydratase small subunit | 0.85 | NIAGMN_26845 | trpA | tryptophan synthase subunit alpha | — | — |
| Escherichia coli ECRC98 | 0.87 | JDDGAC_14325 | leuD | 3-isopropylmalate dehydratase small subunit | 0.85 | JDDGAC_05220 | trpA | tryptophan synthase subunit alpha | 0.79 | 51 |
| Escherichia coli ECRC99 | 0.87 | KEDOAH_17425 | leuD | 3-isopropylmalate dehydratase small subunit | 0.85 | KEDOAH_26075 | trpA | tryptophan synthase subunit alpha | — | — |
| Escherichia coli ECRC100 | 0.87 | OKFHMN_10730 | leuD | 3-isopropylmalate dehydratase small subunit | 0.85 | OKFHMN_02675 | trpA | tryptophan synthase subunit alpha | low | > 80 |
| Rahnella sp. WP5 | 0.84 | EX31_RS03695 | | 3-isopropylmalate dehydratase small subunit | 0.72 | EX31_RS09980 | | tryptophan synthase subunit alpha | 0.95 | 27 |
| Serratia liquefaciens MT49 | 0.84 | IAI46_03340 | | 3-isopropylmalate dehydratase small subunit | 0.78 | IAI46_14045 | | tryptophan synthase subunit alpha | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.84 | HER17_RS03070 | | 3-isopropylmalate dehydratase small subunit | 0.79 | HER17_RS10940 | | tryptophan synthase subunit alpha | 0.97 | 13 |
| Dickeya dianthicola ME23 | 0.84 | DZA65_RS19215 | | 3-isopropylmalate dehydratase small subunit | 0.77 | DZA65_RS10940 | | tryptophan synthase subunit alpha | low | > 75 |
| Dickeya dadantii 3937 | 0.84 | DDA3937_RS18130 | | 3-isopropylmalate dehydratase small subunit | 0.77 | DDA3937_RS10460 | | tryptophan synthase subunit alpha | low | > 74 |
| Dickeya dianthicola 67-19 | 0.83 | HGI48_RS18070 | | 3-isopropylmalate dehydratase small subunit | 0.77 | HGI48_RS10460 | | tryptophan synthase subunit alpha | low | > 71 |
| Pantoea sp. MT58 | 0.83 | IAI47_16015 | | 3-isopropylmalate dehydratase small subunit | 0.74 | IAI47_09165 | | tryptophan synthase subunit alpha | 0.93 | 29 |
| Erwinia tracheiphila SCR3 | 0.74 | LU632_RS02865 | leuD | 3-isopropylmalate dehydratase small subunit | 0.72 | LU632_RS12775 | trpA | tryptophan synthase subunit alpha | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.73 | CSW01_12610 | | 3-isopropylmalate dehydratase small subunit | 0.62 | CSW01_05925 | | tryptophan synthase subunit alpha | 0.74 | 6 |
| Shewanella loihica PV-4 | 0.63 | Shew_3469 | | isopropylmalate isomerase small subunit (RefSeq) | 0.62 | Shew_2256 | trpA | tryptophan synthase subunit alpha (RefSeq) | 0.93 | 37 |
| Pseudomonas stutzeri RCH2 | 0.63 | Psest_2590 | | 3-isopropylmalate dehydratase, small subunit | 0.29 | Psest_0062 | | tryptophan synthase, alpha subunit | 0.65 | 34 |
| Pseudomonas sp. S08-1 | 0.62 | OH686_04475 | | 3-isopropylmalate dehydratase small subunit | 0.28 | OH686_12430 | | tryptophan synthase, alpha subunit | 0.72 | 22 |
| Pseudomonas fluorescens GW456-L13 | 0.62 | PfGW456L13_3947 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.28 | PfGW456L13_565 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | 0.86 | 39 |
| Pseudomonas fluorescens FW300-N1B4 | 0.62 | Pf1N1B4_14 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.27 | Pf1N1B4_1830 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | — | — |
| Pseudomonas sp. RS175 | 0.62 | PFR28_02823 | | 3-isopropylmalate dehydratase small subunit 1 | 0.27 | PFR28_04716 | | Tryptophan synthase alpha chain | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.62 | AO353_20625 | | 3-isopropylmalate dehydratase | 0.28 | AO353_10705 | | tryptophan synthase subunit alpha | 0.80 | 35 |
| Alteromonas macleodii MIT1002 | 0.62 | MIT1002_00946 | | 3-isopropylmalate dehydratase small subunit 1 | 0.54 | MIT1002_01425 | | Tryptophan synthase alpha chain | — | — |
| Pseudomonas putida KT2440 | 0.62 | PP_1986 | | 3-isopropylmalate dehydratase small subunit | 0.30 | PP_0082 | | tryptophan synthase alpha chain | 0.83 | 13 |
| Pseudomonas fluorescens FW300-N2E2 | 0.62 | Pf6N2E2_64 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.28 | Pf6N2E2_4047 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | 0.87 | 16 |
| Pseudomonas fluorescens SBW25 | 0.61 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | 0.29 | PFLU_RS00175 | | tryptophan synthase subunit alpha | 0.61 | 11 |
| Pseudomonas fluorescens SBW25-INTG | 0.61 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | 0.29 | PFLU_RS00175 | | tryptophan synthase subunit alpha | 0.78 | 17 |
| Pseudomonas fluorescens FW300-N2C3 | 0.61 | AO356_21405 | | 3-isopropylmalate dehydratase | 0.28 | AO356_10910 | | tryptophan synthase subunit alpha | 0.92 | 16 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.61 | Xcc-8004.1050.1 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.25 | Xcc-8004.1967.1 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | 0.89 | 8 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.61 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | 0.29 | Psyr_0033 | | tryptophan synthase, alpha chain | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.61 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | 0.29 | Psyr_0033 | | tryptophan synthase, alpha chain | 0.65 | 49 |
| Pseudomonas simiae WCS417 | 0.61 | PS417_18595 | | 3-isopropylmalate dehydratase | 0.29 | PS417_00180 | | tryptophan synthase subunit alpha | 0.60 | 44 |
| Shewanella amazonensis SB2B | 0.60 | Sama_0338 | leuD | isopropylmalate isomerase small subunit (RefSeq) | 0.57 | Sama_2134 | trpA | tryptophan synthase subunit alpha (RefSeq) | 0.89 | 52 |
| Variovorax sp. SCN45 | 0.60 | GFF3889 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.26 | GFF3882 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | — | — |
| Shewanella oneidensis MR-1 | 0.60 | SO4233 | leuD | 3-isopropylmalate dehydratase, small subunit (NCBI ptt file) | 0.62 | SO3024 | trpA | tryptophan synthase, alpha subunit (NCBI ptt file) | 0.91 | 50 |
| Ralstonia sp. UNC404CL21Col | 0.60 | ABZR87_RS14535 | | 3-isopropylmalate dehydratase small subunit | 0.28 | ABZR87_RS14490 | | tryptophan synthase subunit alpha | 0.90 | 3 |
| Cupriavidus basilensis FW507-4G11 | 0.59 | RR42_RS14390 | | 3-isopropylmalate dehydratase | 0.29 | RR42_RS14350 | | tryptophan synthase alpha chain | — | — |
| Ralstonia solanacearum PSI07 | 0.59 | RPSI07_RS14700 | | 3-isopropylmalate dehydratase small subunit | 0.29 | RPSI07_RS14740 | | tryptophan synthase subunit alpha | — | — |
| Ralstonia solanacearum GMI1000 | 0.59 | RS_RS09995 | | 3-isopropylmalate dehydratase small subunit | 0.29 | RS_RS09955 | | tryptophan synthase subunit alpha | — | — |
| Shewanella sp. ANA-3 | 0.59 | Shewana3_3758 | leuD | isopropylmalate isomerase small subunit (RefSeq) | 0.61 | Shewana3_1515 | trpA | tryptophan synthase subunit alpha (RefSeq) | 0.91 | 39 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.59 | H281DRAFT_06073 | | 3-isopropylmalate dehydratase, small subunit | 0.27 | H281DRAFT_06065 | | tryptophan synthase, alpha chain | low | > 103 |
| Kangiella aquimarina DSM 16071 | 0.59 | B158DRAFT_1320 | | 3-isopropylmalate dehydratase, small subunit | 0.48 | B158DRAFT_2430 | | tryptophan synthase, alpha chain (EC 4.2.1.20) | low | > 40 |
| Paraburkholderia sabiae LMG 24235 | 0.58 | QEN71_RS17615 | | 3-isopropylmalate dehydratase small subunit | 0.28 | QEN71_RS17655 | | tryptophan synthase subunit alpha | 0.71 | 49 |
| Variovorax sp. OAS795 | 0.58 | ABID97_RS08460 | | 3-isopropylmalate dehydratase small subunit | 0.25 | ABID97_RS08425 | | tryptophan synthase subunit alpha | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.58 | GFF3361 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.27 | GFF3354 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | 0.92 | 3 |
| Ralstonia solanacearum UW163 | 0.58 | UW163_RS11110 | | 3-isopropylmalate dehydratase small subunit | 0.29 | UW163_RS11150 | | tryptophan synthase subunit alpha | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.58 | RALBFv3_RS02615 | | 3-isopropylmalate dehydratase small subunit | 0.29 | RALBFv3_RS02575 | | tryptophan synthase subunit alpha | — | — |
| Burkholderia phytofirmans PsJN | 0.58 | BPHYT_RS33905 | | 3-isopropylmalate dehydratase small subunit | 0.27 | BPHYT_RS33865 | | tryptophan synthase alpha chain | 0.70 | 23 |
| Herbaspirillum seropedicae SmR1 | 0.57 | HSERO_RS16505 | | 3-isopropylmalate dehydratase small subunit | 0.28 | HSERO_RS16470 | | tryptophan synthase subunit alpha | 0.66 | 46 |
| Paraburkholderia graminis OAS925 | 0.57 | ABIE53_004803 | | 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit | 0.28 | ABIE53_004811 | | tryptophan synthase alpha chain | 0.62 | 33 |
| Acidovorax sp. GW101-3H11 | 0.57 | Ac3H11_1527 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.26 | Ac3H11_1535 | | Tryptophan synthase alpha chain (EC 4.2.1.20) | 0.88 | 17 |
| Dechlorosoma suillum PS | 0.56 | Dsui_3199 | | 3-isopropylmalate dehydratase, small subunit | 0.33 | Dsui_3191 | | tryptophan synthase, alpha subunit | — | — |
| Marinobacter adhaerens HP15 | 0.55 | HP15_1833 | | isopropylmalate isomerase small subunit | 0.30 | HP15_1826 | | tryptophan synthase, alpha subunit | — | — |
| Castellaniella sp019104865 MT123 | 0.55 | ABCV34_RS04285 | | 3-isopropylmalate dehydratase small subunit | 0.26 | ABCV34_RS08430 | | tryptophan synthase subunit alpha | — | — |
| Acinetobacter radioresistens SK82 | 0.55 | MPMX26_00346 | | 3-isopropylmalate dehydratase small subunit 1 | 0.27 | MPMX26_02611 | | Tryptophan synthase alpha chain | — | — |
| Azospirillum sp. SherDot2 | 0.51 | MPMX19_00606 | | 3-isopropylmalate dehydratase small subunit 1 | 0.27 | MPMX19_02737 | | Tryptophan synthase alpha chain | 0.70 | 49 |
| Magnetospirillum magneticum AMB-1 | 0.51 | AMB_RS20565 | | 3-isopropylmalate dehydratase small subunit | 0.29 | AMB_RS20300 | | tryptophan synthase subunit alpha | — | — |
| Rhodopseudomonas palustris CGA009 | 0.51 | TX73_001215 | | 3-isopropylmalate dehydratase small subunit | 0.27 | TX73_000365 | | tryptophan synthase subunit alpha | — | — |
| Dinoroseobacter shibae DFL-12 | 0.51 | Dshi_0083 | | 3-isopropylmalate dehydratase, small subunit (RefSeq) | 0.28 | Dshi_0952 | | tryptophan synthase, alpha subunit (RefSeq) | — | — |
| Rhodospirillum rubrum S1H | 0.50 | Rru_A1190 | | 3-isopropylmalate dehydratase small subunit region (NCBI) | 0.23 | Rru_A3428 | | Tryptophan synthase (NCBI) | 0.70 | 23 |
| Azospirillum brasilense Sp245 | 0.50 | AZOBR_RS14135 | | isopropylmalate isomerase | 0.27 | AZOBR_RS00520 | | tryptophan synthase subunit alpha | 0.82 | 19 |
| Agrobacterium fabrum C58 | 0.49 | Atu2790 | | 3-isopropylmalate dehydratase, small subunit | 0.23 | Atu0019 | | tryptophan synthase alpha subunit | — | — |
| Phaeobacter inhibens DSM 17395 | 0.49 | PGA1_c29790 | | 3-isopropylmalate dehydratase small subunit | 0.29 | PGA1_c04930 | | tryptophan synthase alpha chain | — | — |
| Sinorhizobium meliloti 1021 | 0.49 | SMc03795 | | isopropylmalate isomerase small subunit | 0.25 | SMc02765 | | tryptophan synthase subunit alpha | 0.71 | 79 |
| Rhizobium sp. OAE497 | 0.48 | ABIE40_RS19040 | | 3-isopropylmalate dehydratase small subunit | 0.24 | ABIE40_RS19340 | | tryptophan synthase subunit alpha | — | — |
| Bosea sp. OAE506 | 0.47 | ABIE41_RS11640 | | 3-isopropylmalate dehydratase small subunit | 0.23 | ABIE41_RS03930 | | tryptophan synthase subunit alpha | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.45 | LRK54_RS07370 | | 3-isopropylmalate dehydratase small subunit | 0.28 | LRK54_RS01680 | | tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data) | 0.29 | 29 |
| Rhodanobacter denitrificans MT42 | 0.45 | LRK55_RS07100 | | 3-isopropylmalate dehydratase small subunit | 0.28 | LRK55_RS01460 | | tryptophan synthase subunit alpha | low | > 63 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.45 | ABZR88_RS11600 | | 3-isopropylmalate dehydratase small subunit | 0.24 | ABZR88_RS10660 | | tryptophan synthase subunit alpha | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.44 | CA265_RS15840 | | 3-isopropylmalate dehydratase small subunit | 0.25 | CA265_RS05025 | | tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data) | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.43 | CA264_09440 | | 3-isopropylmalate dehydratase small subunit | 0.26 | CA264_05085 | | tryptophan synthase subunit alpha | 0.33 | 62 |
| Bifidobacterium breve UCC2003 | 0.43 | BBR_RS19625 | | 3-isopropylmalate dehydratase small subunit | 0.24 | BBR_RS15810 | | tryptophan synthase subunit alpha | low | > 34 |
| Bacteroides stercoris CC31F | 0.43 | HMPREF1181_RS14140 | | 3-isopropylmalate dehydratase small subunit | 0.23 | HMPREF1181_RS15350 | | tryptophan synthase subunit alpha | 0.78 | 46 |
| Phocaeicola dorei CL03T12C01 | 0.42 | ABI39_RS10205 | | 3-isopropylmalate dehydratase small subunit | 0.23 | ABI39_RS21075 | | tryptophan synthase subunit alpha | 0.70 | 51 |
| Caulobacter crescentus NA1000 | 0.42 | CCNA_00195 | | 3-isopropylmalate dehydratase small subunit | 0.28 | CCNA_03657 | | tryptophan synthase alpha chain | 0.90 | 37 |
| Lysobacter sp. OAE881 | 0.42 | ABIE51_RS17580 | | 3-isopropylmalate dehydratase small subunit | 0.30 | ABIE51_RS08265 | | tryptophan synthase subunit alpha | 0.80 | 62 |
| Caulobacter crescentus NA1000 Δfur | 0.42 | CCNA_00195 | | 3-isopropylmalate dehydratase small subunit | 0.28 | CCNA_03657 | | tryptophan synthase alpha chain | low | > 67 |
| Phocaeicola vulgatus CL09T03C04 | 0.42 | HMPREF1058_RS14555 | | 3-isopropylmalate dehydratase small subunit | 0.24 | HMPREF1058_RS07200 | | tryptophan synthase subunit alpha | 0.83 | 12 |
| Parabacteroides merdae CL09T00C40 | 0.42 | HMPREF1078_RS16655 | | 3-isopropylmalate dehydratase small subunit | 0.24 | HMPREF1078_RS00120 | | tryptophan synthase subunit alpha | 0.87 | 21 |
| Rhodanobacter sp. FW510-T8 | 0.40 | OKGIIK_13590 | leuD | 3-isopropylmalate dehydratase small subunit | 0.27 | OKGIIK_04850 | trpA | tryptophan synthase subunit alpha | low | > 52 |
| Dyella japonica UNC79MFTsu3.2 | 0.40 | ABZR86_RS15955 | | 3-isopropylmalate dehydratase small subunit | 0.28 | ABZR86_RS07995 | | tryptophan synthase subunit alpha | low | > 74 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.40 | A4249_RS10000 | | 3-isopropylmalate dehydratase small subunit | 0.27 | A4249_RS11320 | | tryptophan synthase subunit alpha | — | — |
| Bacteroides ovatus ATCC 8483 | 0.39 | BACOVA_04602 | | 3-isopropylmalate dehydratase, small subunit | 0.24 | BACOVA_03785 | | tryptophan synthase, alpha subunit | 0.92 | 31 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.39 | BT1859 | | 3-isopropylmalate dehydratase small subunit (NCBI ptt file) | 0.24 | BT0527 | | tryptophan synthase alpha chain (NCBI ptt file) | 0.86 | 16 |
| Mycobacterium tuberculosis H37Rv | 0.39 | Rv2987c | | Probable 3-isopropylmalate dehydratase (small subunit) LeuD (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI) | 0.17 | Rv1613 | | Probable tryptophan synthase, alpha subunit TrpA | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.38 | Echvi_2060 | | 3-isopropylmalate dehydratase, small subunit | 0.23 | Echvi_2511 | | tryptophan synthase, alpha subunit | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.37 | Ga0059261_4225 | | 3-isopropylmalate dehydratase, small subunit | 0.28 | Ga0059261_0239 | | tryptophan synthase, alpha chain (EC 4.2.1.20) | 0.87 | 54 |
| Synechococcus elongatus PCC 7942 | 0.27 | Synpcc7942_2548 | leuD | isopropylmalate isomerase small subunit | 0.27 | Synpcc7942_0411 | trpA | tryptophan synthase subunit alpha | — | — |
Not shown: 0 genomes with orthologs for BWI76_RS04665 only; 4 genomes with orthologs for BWI76_RS11840 only