Conservation of cofitness between BPHYT_RS02610 and BPHYT_RS33915 in Burkholderia phytofirmans PsJN

97 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS02610 glycerol-3-phosphate dehydrogenase [NAD(P)+] 1.0 BPHYT_RS33915 isopropylmalate isomerase 0.79 12
Paraburkholderia bryophila 376MFSha3.1 0.95 H281DRAFT_02000 glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.97 H281DRAFT_06075 3-isopropylmalate dehydratase, large subunit 0.48 19
Paraburkholderia graminis OAS925 0.92 ABIE53_000667 glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.96 ABIE53_004801 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit 0.51 16
Paraburkholderia sabiae LMG 24235 0.85 QEN71_RS01465 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.95 QEN71_RS17605 3-isopropylmalate dehydratase large subunit 0.70 55
Ralstonia solanacearum GMI1000 0.62 RS_RS01760 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 0.87 RS_RS10000 3-isopropylmalate dehydratase large subunit
Ralstonia solanacearum UW163 0.60 UW163_RS02660 glycerol-3-phosphate dehydrogenase 0.87 UW163_RS11105 3-isopropylmalate dehydratase large subunit
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS10920 glycerol-3-phosphate dehydrogenase 0.87 RALBFv3_RS02620 3-isopropylmalate dehydratase large subunit 0.64 21
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS06770 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.87 ABZR87_RS14540 3-isopropylmalate dehydratase large subunit 0.70 18
Ralstonia solanacearum PSI07 0.58 RPSI07_RS22390 glycerol-3-phosphate dehydrogenase 0.87 RPSI07_RS14695 3-isopropylmalate dehydratase large subunit 0.66 48
Castellaniella sp019104865 MT123 0.56 ABCV34_RS14250 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.77 ABCV34_RS04290 3-isopropylmalate dehydratase large subunit 0.34 14
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS00795 glycerol-3-phosphate dehydrogenase 0.80 HSERO_RS16515 isopropylmalate isomerase 0.79 4
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS01845 glycerol-3-phosphate dehydrogenase 0.86 RR42_RS14400 isopropylmalate isomerase 0.83 8
Variovorax sp. SCN45 0.50 GFF2573 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.75 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 127
Variovorax sp. OAS795 0.49 ABID97_RS07405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.75 ABID97_RS08465 3-isopropylmalate dehydratase large subunit
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF1222 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.75 GFF3363 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) low > 90
Acidovorax sp. GW101-3H11 0.46 Ac3H11_3860 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.74 Ac3H11_1525 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.78 18
Dechlorosoma suillum PS 0.43 Dsui_1277 glycerol-3-phosphate dehydrogenase 0.70 Dsui_3201 3-isopropylmalate dehydratase, large subunit
Lysobacter sp. OAE881 0.42 ABIE51_RS00495 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.48 ABIE51_RS17575 3-isopropylmalate dehydratase large subunit
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.271.1 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.72 Xcc-8004.1049.1 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.65 17
Kangiella aquimarina DSM 16071 0.40 B158DRAFT_0712 Glycerol-3-phosphate dehydrogenase 0.73 B158DRAFT_1319 3-isopropylmalate dehydratase, large subunit
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_13015 gpsA glycerol-3-phosphate dehydrogenase 0.47 OKGIIK_13585 leuC 3-isopropylmalate dehydratase large subunit
Shewanella loihica PV-4 0.39 Shew_3803 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.59 Shew_3470 isopropylmalate isomerase large subunit (RefSeq)
Rhodanobacter denitrificans MT42 0.38 LRK55_RS10550 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.60 LRK55_RS07105 3-isopropylmalate dehydratase large subunit
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS13250 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 ABZR86_RS15960 3-isopropylmalate dehydratase large subunit
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS10860 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.60 LRK54_RS07375 3-isopropylmalate dehydratase large subunit
Shewanella sp. ANA-3 0.38 Shewana3_0054 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.59 Shewana3_3759 isopropylmalate isomerase large subunit (RefSeq)
Shewanella amazonensis SB2B 0.38 Sama_0063 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) 0.58 Sama_0337 isopropylmalate isomerase large subunit (RefSeq)
Shewanella oneidensis MR-1 0.38 SO0053 gpsA glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI ptt file) 0.59 SO4234 leuC 3-isopropylmalate dehydratase, large subunit (NCBI ptt file)
Alteromonas macleodii MIT1002 0.38 MIT1002_00485 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.57 MIT1002_00947 3-isopropylmalate dehydratase large subunit low > 70
Rhodospirillum rubrum S1H 0.37 Rru_A3571 Glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI) 0.69 Rru_A1189 3-isopropylmalate dehydratase large subunit region (NCBI) low > 58
Azospirillum sp. SherDot2 0.37 MPMX19_02123 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.68 MPMX19_01998 3-isopropylmalate dehydratase large subunit 0.70 22
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_2234 Glycerol-3-phosphate dehydrogenase 0.58 Ga0059261_4223 3-isopropylmalate dehydratase, large subunit low > 68
Azospirillum brasilense Sp245 0.36 AZOBR_RS00325 glycerol-3-phosphate dehydrogenase 0.68 AZOBR_RS03545 isopropylmalate isomerase 0.73 20
Pectobacterium carotovorum WPP14 0.36 HER17_RS20735 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.61 HER17_RS03075 3-isopropylmalate dehydratase large subunit low > 75
Serratia liquefaciens MT49 0.36 IAI46_24690 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.59 IAI46_03345 3-isopropylmalate dehydratase large subunit low > 86
Rahnella sp. WP5 0.36 EX31_RS14340 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 EX31_RS03690 3-isopropylmalate dehydratase large subunit 0.76 2
Escherichia coli BW25113 0.36 b3608 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (NCBI) 0.62 b0072 leuC isopropylmalate isomerase large subunit (NCBI)
Escherichia coli ECRC98 0.36 JDDGAC_19380 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.61 JDDGAC_14320 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli Nissle 1917 0.36 ECOLIN_RS20595 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 ECOLIN_RS00390 3-isopropylmalate dehydratase large subunit
Escherichia coli ECRC62 0.36 BNILDI_03880 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 BNILDI_08540 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECOR27 0.36 NOLOHH_07635 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 NOLOHH_03070 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC102 0.36 NIAGMN_13515 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.61 NIAGMN_08575 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli BL21 0.36 ECD_03466 glycerol-3-phosphate dehydrogenase (NAD+) 0.62 ECD_00074 3-isopropylmalate dehydratase large subunit
Escherichia coli ECRC99 0.36 KEDOAH_12395 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.61 KEDOAH_17430 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia fergusonii Becca 0.36 EFB2_00202 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.62 EFB2_03973 3-isopropylmalate dehydratase large subunit
Enterobacter sp. TBS_079 0.36 MPMX20_00125 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.61 MPMX20_00767 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC100 0.36 OKFHMN_15755 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.61 OKFHMN_10725 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECOR38 0.36 HEPCGN_14595 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 HEPCGN_08705 leuC1 3-isopropylmalate dehydratase large subunit 1
Escherichia coli ECRC101 0.36 MCAODC_06265 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.61 MCAODC_01240 leuC1 3-isopropylmalate dehydratase large subunit 1
Dickeya dadantii 3937 0.36 DDA3937_RS20405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.61 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit
Enterobacter asburiae PDN3 0.36 EX28DRAFT_3859 Glycerol-3-phosphate dehydrogenase 0.62 EX28DRAFT_3668 3-isopropylmalate dehydratase, large subunit
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_00091 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.62 OHPLBJKB_03585 3-isopropylmalate dehydratase large subunit
Klebsiella michiganensis M5al 0.36 BWI76_RS27210 glycerol-3-phosphate dehydrogenase 0.61 BWI76_RS04670 3-isopropylmalate dehydratase large subunit
Dickeya dianthicola 67-19 0.35 HGI48_RS00795 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 HGI48_RS18065 3-isopropylmalate dehydratase large subunit low > 71
Mycobacterium tuberculosis H37Rv 0.35 Rv0564c Probable glycerol-3-phosphate dehydrogenase [NAD(P)+] GpdA1 (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependent dihydroxyacetone-phosphate reductase) 0.57 Rv2988c Probable 3-isopropylmalate dehydratase (large subunit) LeuC (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI)
Dickeya dianthicola ME23 0.35 DZA65_RS00850 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 DZA65_RS19210 3-isopropylmalate dehydratase large subunit
Caulobacter crescentus NA1000 0.35 CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 CCNA_00196 3-isopropylmalate dehydratase large subunit
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_00068 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 CCNA_00196 3-isopropylmalate dehydratase large subunit
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF402 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.62 GFF166 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_13405 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 0.59 CSW01_12605 3-isopropylmalate dehydratase large subunit
Pantoea sp. MT58 0.35 IAI47_00740 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.62 IAI47_16010 3-isopropylmalate dehydratase large subunit
Erwinia tracheiphila SCR3 0.34 LU632_RS21875 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.58 LU632_RS02870 leuC 3-isopropylmalate dehydratase large subunit low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.33 A4249_RS15450 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.46 A4249_RS10005 3-isopropylmalate dehydratase large subunit
Acinetobacter radioresistens SK82 0.32 MPMX26_01116 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.68 MPMX26_00345 3-isopropylmalate dehydratase large subunit
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.72 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.62 34
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.72 Psyr_1983 3-isopropylmalate dehydratase, large subunit
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_2046 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.72 PfGW456L13_3948 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.88 11
Pseudomonas stutzeri RCH2 0.31 Psest_2471 Glycerol-3-phosphate dehydrogenase 0.72 Psest_2591 3-isopropylmalate dehydratase, large subunit
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_01735 glycerol-3-phosphate dehydrogenase 0.72 AO353_20620 isopropylmalate isomerase
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.71 PFLU_RS20580 3-isopropylmalate dehydratase large subunit 0.22 86
Pseudomonas fluorescens SBW25 0.31 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.71 PFLU_RS20580 3-isopropylmalate dehydratase large subunit low > 109
Pseudomonas sp. RS175 0.30 PFR28_03076 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.73 PFR28_02824 3-isopropylmalate dehydratase large subunit
Pseudomonas simiae WCS417 0.30 PS417_09000 glycerol-3-phosphate dehydrogenase 0.72 PS417_18600 isopropylmalate isomerase
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_19795 glycerol-3-phosphate dehydrogenase 0.73 AO356_21400 isopropylmalate isomerase 0.89 17
Marinobacter adhaerens HP15 0.30 HP15_1762 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.73 HP15_1834 protein containing 3-isopropylmalate dehydratase, large subunit region domain
Pseudomonas fluorescens FW300-N2E2 0.30 Pf6N2E2_5875 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.72 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Dinoroseobacter shibae DFL-12 0.29 Dshi_3830 Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) (RefSeq) 0.58 Dshi_0085 3-isopropylmalate dehydratase, large subunit (RefSeq) low > 64
Agrobacterium fabrum C58 0.29 Atu2650 glycerol-3-phosphate dehydrogenase 0.65 Atu2709 3-isopropylmalate dehydratase, large subunit 0.91 2
Pseudomonas putida KT2440 0.29 PP_4169 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.72 PP_1985 3-isopropylmalate dehydratase large subunit
Rhizobium sp. OAE497 0.29 ABIE40_RS18055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.65 ABIE40_RS18380 3-isopropylmalate dehydratase large subunit 0.76 11
Phaeobacter inhibens DSM 17395 0.29 PGA1_c35480 glycerol-3-phosphate dehydrogenase GpsA 0.59 PGA1_c29780 3-isopropylmalate dehydratase large subunit 0.92 4
Pseudomonas sp. S08-1 0.28 OH686_00475 Glycerol-3-phosphate dehydrogenase [NAD(P)+] 0.71 OH686_04480 3-isopropylmalate dehydratase large subunit 0.56 58
Sinorhizobium meliloti 1021 0.28 SMc03229 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.66 SMc03823 isopropylmalate isomerase large subunit 0.79 19
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_3518 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 0.72 Pf1N1B4_15 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.67 24
Synechococcus elongatus PCC 7942 0.27 Synpcc7942_2522 Glycerol-3-phosphate dehydrogenase (NAD(P)+) 0.47 Synpcc7942_1898 leuC isopropylmalate isomerase large subunit
Bosea sp. OAE506 0.27 ABIE41_RS05655 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.66 ABIE41_RS11660 3-isopropylmalate dehydratase large subunit
Rhodopseudomonas palustris CGA009 0.26 TX73_001320 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.64 TX73_001245 3-isopropylmalate dehydratase large subunit
Echinicola vietnamensis KMM 6221, DSM 17526 0.25 Echvi_0322 Glycerol-3-phosphate dehydrogenase 0.49 Echvi_2059 3-isopropylmalate dehydratase, large subunit
Bifidobacterium breve UCC2003 0.21 BBR_RS12080 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.54 BBR_RS19630 3-isopropylmalate dehydratase large subunit
Bacteroides stercoris CC31F 0.20 HMPREF1181_RS08570 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.50 HMPREF1181_RS14145 3-isopropylmalate dehydratase large subunit
Bacteroides thetaiotaomicron VPI-5482 0.19 BT2123 glycerol-3-phosphate dehydrogenase (NCBI ptt file) 0.50 BT1860 3-isopropylmalate dehydratase large subunit (NCBI ptt file)
Pontibacter actiniarum KMM 6156, DSM 19842 0.19 CA264_05630 glycerol-3-phosphate dehydrogenase 0.51 CA264_09435 3-isopropylmalate dehydratase large subunit low > 74
Bacteroides ovatus ATCC 8483 0.19 BACOVA_03234 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminal domain protein 0.50 BACOVA_04603 3-isopropylmalate dehydratase, large subunit
Mucilaginibacter yixingensis YX-36 DSM 26809 0.18 ABZR88_RS01515 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.52 ABZR88_RS11595 3-isopropylmalate dehydratase large subunit
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS16375 glycerol-3-phosphate dehydrogenase 0.51 CA265_RS15830 3-isopropylmalate dehydratase large subunit
Parabacteroides merdae CL09T00C40 0.18 HMPREF1078_RS10070 glycerol-3-phosphate dehydrogenase 0.49 HMPREF1078_RS16660 3-isopropylmalate dehydratase large subunit
Phocaeicola dorei CL03T12C01 0.17 ABI39_RS21145 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.50 ABI39_RS10200 3-isopropylmalate dehydratase large subunit
Phocaeicola vulgatus CL09T03C04 0.17 HMPREF1058_RS07270 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.49 HMPREF1058_RS14550 3-isopropylmalate dehydratase large subunit

Not shown: 2 genomes with orthologs for BPHYT_RS02610 only; 1 genomes with orthologs for BPHYT_RS33915 only