Conservation of cofitness between BPHYT_RS15920 and BPHYT_RS33875 in Burkholderia phytofirmans PsJN

91 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS15920 argininosuccinate synthase 1.0 BPHYT_RS33875 tryptophan synthase subunit alpha 0.94 7
Paraburkholderia graminis OAS925 1.00 ABIE53_003355 argininosuccinate synthase 0.97 ABIE53_004809 tryptophan synthase beta chain
Paraburkholderia bryophila 376MFSha3.1 0.99 H281DRAFT_04120 argininosuccinate synthase 0.97 H281DRAFT_06067 tryptophan synthase, beta chain 0.77 2
Cupriavidus basilensis FW507-4G11 0.91 RR42_RS17170 argininosuccinate synthase 0.90 RR42_RS14360 tryptophan synthase subunit alpha
Dechlorosoma suillum PS 0.84 Dsui_3248 argininosuccinate synthase 0.85 Dsui_3192 tryptophan synthase, beta subunit
Pseudomonas stutzeri RCH2 0.76 Psest_3121 argininosuccinate synthase 0.70 Psest_0063 tryptophan synthase, beta subunit
Pseudomonas putida KT2440 0.76 PP_1088 Argininosuccinate synthase 0.66 PP_0083 tryptophan synthase beta chain 0.78 35
Pseudomonas sp. RS175 0.75 PFR28_03353 Argininosuccinate synthase 0.68 PFR28_04715 Tryptophan synthase beta chain
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_742 Argininosuccinate synthase (EC 6.3.4.5) 0.69 Pf1N1B4_1831 Tryptophan synthase beta chain (EC 4.2.1.20) 0.86 4
Pseudomonas fluorescens FW300-N2E2 0.75 Pf6N2E2_5590 Argininosuccinate synthase (EC 6.3.4.5) 0.68 Pf6N2E2_4048 Tryptophan synthase beta chain (EC 4.2.1.20)
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_18325 argininosuccinate synthase 0.68 AO356_10915 tryptophan synthase subunit beta 0.94 10
Pseudomonas simiae WCS417 0.75 PS417_05640 argininosuccinate synthase 0.68 PS417_00185 tryptophan synthase subunit beta
Pseudomonas fluorescens GW456-L13 0.74 PfGW456L13_1749 Argininosuccinate synthase (EC 6.3.4.5) 0.68 PfGW456L13_566 Tryptophan synthase beta chain (EC 4.2.1.20) 0.82 21
Pseudomonas fluorescens SBW25-INTG 0.74 PFLU_RS05725 argininosuccinate synthase 0.69 PFLU_RS00180 tryptophan synthase subunit beta
Pseudomonas fluorescens SBW25 0.74 PFLU_RS05725 argininosuccinate synthase 0.69 PFLU_RS00180 tryptophan synthase subunit beta
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_04105 argininosuccinate synthase 0.68 AO353_10710 tryptophan synthase subunit beta 0.87 16
Pseudomonas sp. S08-1 0.74 OH686_03930 argininosuccinate synthase 0.70 OH686_12425 tryptophan synthase, beta subunit 0.82 13
Marinobacter adhaerens HP15 0.74 HP15_2367 argininosuccinate synthase 0.67 HP15_1827 tryptophan synthase, beta subunit
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_3892 argininosuccinate synthase 0.66 Psyr_0034 tryptophan synthase, beta chain
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_3892 argininosuccinate synthase 0.66 Psyr_0034 tryptophan synthase, beta chain
Azospirillum brasilense Sp245 0.70 AZOBR_RS00785 argininosuccinate synthase 0.68 AZOBR_RS00525 tryptophan synthase subunit beta
Azospirillum sp. SherDot2 0.70 MPMX19_02369 Argininosuccinate synthase 0.67 MPMX19_02736 Tryptophan synthase beta chain
Magnetospirillum magneticum AMB-1 0.68 AMB_RS05720 argininosuccinate synthase 0.67 AMB_RS20295 tryptophan synthase subunit beta
Rhodospirillum rubrum S1H 0.68 Rru_A3751 Argininosuccinate synthase (NCBI) 0.66 Rru_A3427 Tryptophan synthase, beta chain (NCBI) 0.93 15
Caulobacter crescentus NA1000 0.67 CCNA_00128 argininosuccinate synthase 0.61 CCNA_03658 tryptophan synthase beta chain
Caulobacter crescentus NA1000 Δfur 0.67 CCNA_00128 argininosuccinate synthase 0.61 CCNA_03658 tryptophan synthase beta chain low > 67
Phaeobacter inhibens DSM 17395 0.67 PGA1_c34920 argininosuccinate synthase ArgG 0.66 PGA1_c04870 tryptophan synthase beta chain
Brevundimonas sp. GW460-12-10-14-LB2 0.67 A4249_RS14275 argininosuccinate synthase 0.62 A4249_RS11330 tryptophan synthase subunit beta
Dinoroseobacter shibae DFL-12 0.65 Dshi_3472 Argininosuccinate synthase (RefSeq) 0.65 Dshi_1031 tryptophan synthase, beta subunit (RefSeq)
Sphingomonas koreensis DSMZ 15582 0.64 Ga0059261_1393 argininosuccinate synthase (EC 6.3.4.5) 0.67 Ga0059261_0238 tryptophan synthase, beta subunit
Agrobacterium fabrum C58 0.64 Atu2667 argininosuccinate synthase 0.64 Atu0018 tryptophan synthase beta subunit
Rhizobium sp. OAE497 0.64 ABIE40_RS18150 argininosuccinate synthase 0.64 ABIE40_RS19335 tryptophan synthase subunit beta
Sinorhizobium meliloti 1021 0.64 SMc03826 argininosuccinate synthase 0.64 SMc02766 tryptophan synthase subunit beta 0.73 56
Bosea sp. OAE506 0.64 ABIE41_RS00340 argininosuccinate synthase 0.67 ABIE41_RS04270 tryptophan synthase subunit beta
Desulfovibrio vulgaris Hildenborough JW710 0.59 DVU1095 argG argininosuccinate synthase (TIGR) 0.57 DVU0085 trpB-1 tryptophan synthase, beta subunit (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.57 DvMF_0047 argininosuccinate synthase (RefSeq) 0.57 DvMF_2237 tryptophan synthase subunit beta (RefSeq) low > 51
Serratia liquefaciens MT49 0.48 IAI46_24505 argininosuccinate synthase 0.53 IAI46_14040 tryptophan synthase subunit beta 0.55 83
Pantoea sp. MT58 0.47 IAI47_00915 argininosuccinate synthase 0.53 IAI47_09170 tryptophan synthase subunit beta 0.93 33
Erwinia tracheiphila SCR3 0.47 LU632_RS19605 argininosuccinate synthase 0.54 LU632_RS12770 trpB tryptophan synthase subunit beta low > 74
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_13370 argininosuccinate synthase 0.54 CSW01_05930 tryptophan synthase subunit beta low > 62
Shewanella sp. ANA-3 0.46 Shewana3_3902 argininosuccinate synthase (RefSeq) 0.53 Shewana3_1516 tryptophan synthase subunit beta (RefSeq) 0.90 22
Shewanella oneidensis MR-1 0.46 SO0278 argG argininosuccinate synthase (NCBI ptt file) 0.53 SO3023 trpB tryptophan synthase, beta subunit (NCBI ptt file) 0.90 45
Alteromonas macleodii MIT1002 0.46 MIT1002_00468 Argininosuccinate synthase 0.53 MIT1002_01426 Tryptophan synthase beta chain
Shewanella amazonensis SB2B 0.45 Sama_0259 argininosuccinate synthase (RefSeq) 0.53 Sama_2133 tryptophan synthase subunit beta (RefSeq) 0.90 48
Shewanella loihica PV-4 0.45 Shew_0205 argininosuccinate synthase (RefSeq) 0.54 Shew_2255 tryptophan synthase subunit beta (RefSeq) 0.91 44
Synechococcus elongatus PCC 7942 0.41 Synpcc7942_0009 argG argininosuccinate synthase 0.61 Synpcc7942_2143 trpB tryptophan synthase subunit beta
Methanococcus maripaludis S2 0.39 MMP_RS00425 argininosuccinate synthase 0.58 MMP_RS05190 tryptophan synthase subunit beta
Methanococcus maripaludis JJ 0.37 MMJJ_RS05060 argininosuccinate synthase 0.58 MMJJ_RS09190 tryptophan synthase subunit beta
Mycobacterium tuberculosis H37Rv 0.34 Rv1658 Probable argininosuccinate synthase ArgG 0.62 Rv1612 Tryptophan synthase, beta subunit TrpB
Kangiella aquimarina DSM 16071 0.22 B158DRAFT_1976 argininosuccinate synthase (EC 6.3.4.5) 0.54 B158DRAFT_2429 tryptophan synthase, beta subunit low > 40
Dyella japonica UNC79MFTsu3.2 0.20 ABZR86_RS08715 arginosuccinate synthetase (EC 6.3.4.5) (from data) 0.72 ABZR86_RS08000 tryptophan synthase subunit beta 0.95 25
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.2318.1 Argininosuccinate synthase (EC 6.3.4.5) 0.71 Xcc-8004.1964.1 Tryptophan synthase beta chain (EC 4.2.1.20) 0.81 22
Rhodanobacter denitrificans MT42 0.19 LRK55_RS02155 argininosuccinate synthase 0.70 LRK55_RS01465 tryptophan synthase subunit beta low > 63
Lysobacter sp. OAE881 0.19 ABIE51_RS13405 argininosuccinate synthase 0.71 ABIE51_RS08260 tryptophan synthase subunit beta low > 62
Rhodanobacter denitrificans FW104-10B01 0.19 LRK54_RS02400 argininosuccinate synthase 0.70 LRK54_RS01685 tryptophan synthase subunit beta low > 59
Mucilaginibacter yixingensis YX-36 DSM 26809 0.19 ABZR88_RS15515 argininosuccinate synthase 0.57 ABZR88_RS10665 tryptophan synthase subunit beta
Rhodanobacter sp. FW510-T8 0.19 OKGIIK_09465 argG argininosuccinate synthase 0.70 OKGIIK_04845 trpB tryptophan synthase subunit beta low > 52
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_3846 argininosuccinate synthase 0.54 Echvi_2510 tryptophan synthase, beta subunit
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS18545 argininosuccinate synthase 0.56 CA265_RS05020 tryptophan synthase subunit beta
Pontibacter actiniarum KMM 6156, DSM 19842 0.18 CA264_06255 argininosuccinate synthase 0.55 CA264_05080 tryptophan synthase subunit beta low > 74
Parabacteroides merdae CL09T00C40 0.18 HMPREF1078_RS10575 argininosuccinate synthase 0.52 HMPREF1078_RS00150 tryptophan synthase subunit beta 0.97 28
Phocaeicola vulgatus CL09T03C04 0.17 HMPREF1058_RS08845 argininosuccinate synthase 0.51 HMPREF1058_RS07170 tryptophan synthase subunit beta 0.76 35
Phocaeicola dorei CL03T12C01 0.17 ABI39_RS02975 argininosuccinate synthase 0.51 ABI39_RS21045 tryptophan synthase subunit beta 0.70 44
Bacteroides ovatus ATCC 8483 0.17 BACOVA_03590 putative argininosuccinate synthase 0.50 BACOVA_03779 tryptophan synthase, beta subunit 0.87 54
Bacteroides thetaiotaomicron VPI-5482 0.17 BT3760 arginosuccinate synthetase (EC 6.3.4.5) (from data) 0.51 BT0533 tryptophan synthase beta chain (NCBI ptt file) 0.83 40
Bacteroides stercoris CC31F 0.17 HMPREF1181_RS03460 argininosuccinate synthase 0.53 HMPREF1181_RS15320 tryptophan synthase subunit beta 0.88 41
Herbaspirillum seropedicae SmR1 0.16 HSERO_RS07180 argininosuccinate synthase 0.79 HSERO_RS16475 tryptophan synthase subunit alpha
Paraburkholderia sabiae LMG 24235 0.16 QEN71_RS09235 argininosuccinate synthase 0.96 QEN71_RS17645 tryptophan synthase subunit beta 0.85 44
Ralstonia solanacearum GMI1000 0.15 RS_RS12800 argininosuccinate synthase 0.88 RS_RS09965 tryptophan synthase subunit beta
Ralstonia solanacearum PSI07 0.15 RPSI07_RS12120 argininosuccinate synthase 0.88 RPSI07_RS14730 tryptophan synthase subunit beta
Ralstonia sp. UNC404CL21Col 0.15 ABZR87_RS00835 argininosuccinate synthase 0.88 ABZR87_RS14500 tryptophan synthase subunit beta 0.69 35
Ralstonia solanacearum UW163 0.15 UW163_RS08445 argininosuccinate synthase 0.88 UW163_RS11140 tryptophan synthase subunit beta
Variovorax sp. SCN45 0.15 GFF3096 Argininosuccinate synthase (EC 6.3.4.5) 0.78 GFF3883 Tryptophan synthase beta chain (EC 4.2.1.20)
Ralstonia solanacearum IBSBF1503 0.15 RALBFv3_RS05180 argininosuccinate synthase 0.88 RALBFv3_RS02585 tryptophan synthase subunit beta
Rahnella sp. WP5 0.15 EX31_RS13445 argininosuccinate synthase 0.54 EX31_RS09975 tryptophan synthase subunit beta 0.98 14
Variovorax sp. OAS795 0.15 ABID97_RS21670 argininosuccinate synthase 0.77 ABID97_RS08430 tryptophan synthase subunit beta
Rhodopseudomonas palustris CGA009 0.14 TX73_002040 argininosuccinate synthase 0.67 TX73_000360 tryptophan synthase subunit beta
Hydrogenophaga sp. GW460-11-11-14-LB1 0.14 GFF294 Argininosuccinate synthase (EC 6.3.4.5) 0.79 GFF3355 Tryptophan synthase beta chain (EC 4.2.1.20)
Acidovorax sp. GW101-3H11 0.14 Ac3H11_2616 Argininosuccinate synthase (EC 6.3.4.5) 0.77 Ac3H11_1534 Tryptophan synthase beta chain (EC 4.2.1.20)
Escherichia coli ECRC101 0.14 MCAODC_08610 argG argininosuccinate synthase 0.53 MCAODC_15595 trpB tryptophan synthase subunit beta 0.83 52
Escherichia coli ECOR38 0.14 HEPCGN_16965 argG argininosuccinate synthase 0.53 HEPCGN_25520 trpB tryptophan synthase subunit beta 0.91 58
Escherichia coli BW25113 0.14 b3172 argG argininosuccinate synthase (NCBI) 0.53 b1261 trpB tryptophan synthase subunit beta (NCBI) 0.89 45
Escherichia coli ECRC99 0.14 KEDOAH_10060 argG argininosuccinate synthase 0.53 KEDOAH_26080 trpB tryptophan synthase subunit beta
Escherichia coli ECRC100 0.14 OKFHMN_18090 argG argininosuccinate synthase 0.53 OKFHMN_02670 trpB tryptophan synthase subunit beta 0.84 69
Escherichia coli ECRC62 0.14 BNILDI_01645 argG argininosuccinate synthase 0.53 BNILDI_18475 trpB tryptophan synthase subunit beta 0.92 55
Escherichia coli ECOR27 0.14 NOLOHH_09890 argG argininosuccinate synthase 0.53 NOLOHH_20330 trpB tryptophan synthase subunit beta 0.92 18
Escherichia coli HS(pFamp)R (ATCC 700891) 0.14 OHPLBJKB_00528 Argininosuccinate synthase 0.53 OHPLBJKB_02422 Tryptophan synthase beta chain low > 73
Escherichia fergusonii Becca 0.14 EFB2_00651 Argininosuccinate synthase 0.53 EFB2_02665 Tryptophan synthase beta chain low > 86
Escherichia coli ECRC98 0.14 JDDGAC_21715 argG argininosuccinate synthase 0.53 JDDGAC_05215 trpB tryptophan synthase subunit beta 0.86 31
Escherichia coli BL21 0.14 ECD_03038 argininosuccinate synthetase 0.53 ECD_01235 tryptophan synthase, beta subunit 0.68 59
Escherichia coli ECRC102 0.14 NIAGMN_15850 argG argininosuccinate synthase 0.53 NIAGMN_26840 trpB tryptophan synthase subunit beta
Escherichia coli Nissle 1917 0.14 ECOLIN_RS18275 argininosuccinate synthase 0.53 ECOLIN_RS07600 tryptophan synthase subunit beta 0.84 26

Not shown: 1 genomes with orthologs for BPHYT_RS15920 only; 10 genomes with orthologs for BPHYT_RS33875 only