Conservation of cofitness between BPHYT_RS33900 and BPHYT_RS13705 in Burkholderia phytofirmans PsJN

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS33900 3-isopropylmalate dehydrogenase 1.0 BPHYT_RS13705 chorismate synthase 0.92 13
Paraburkholderia graminis OAS925 0.98 ABIE53_004804 3-isopropylmalate dehydrogenase 0.97 ABIE53_002916 chorismate synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.98 H281DRAFT_06072 3-isopropylmalate dehydrogenase 0.97 H281DRAFT_04489 chorismate synthase — —
Paraburkholderia sabiae LMG 24235 0.96 QEN71_RS17620 3-isopropylmalate dehydrogenase 0.95 QEN71_RS05215 chorismate synthase 0.66 51
Ralstonia sp. UNC404CL21Col 0.89 ABZR87_RS14530 3-isopropylmalate dehydrogenase 0.87 ABZR87_RS13790 chorismate synthase 0.91 12
Cupriavidus basilensis FW507-4G11 0.89 RR42_RS14385 3-isopropylmalate dehydrogenase 0.86 RR42_RS06485 chorismate synthase 0.85 6
Ralstonia solanacearum PSI07 0.89 RPSI07_RS14705 3-isopropylmalate dehydrogenase 0.84 RPSI07_RS15640 chorismate synthase — —
Ralstonia solanacearum GMI1000 0.89 RS_RS09990 3-isopropylmalate dehydrogenase 0.84 RS_RS07885 chorismate synthase low > 80
Ralstonia solanacearum IBSBF1503 0.89 RALBFv3_RS02610 3-isopropylmalate dehydrogenase 0.84 RALBFv3_RS01850 chorismate synthase — —
Ralstonia solanacearum UW163 0.89 UW163_RS11115 3-isopropylmalate dehydrogenase 0.84 UW163_RS15160 chorismate synthase — —
Herbaspirillum seropedicae SmR1 0.86 HSERO_RS16500 3-isopropylmalate dehydrogenase 0.80 HSERO_RS16525 chorismate synthase — —
Acidovorax sp. GW101-3H11 0.79 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.76 Ac3H11_2925 Chorismate synthase (EC 4.2.3.5) 0.86 24
Variovorax sp. SCN45 0.79 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.70 GFF2627 Chorismate synthase (EC 4.2.3.5) 0.45 92
Variovorax sp. OAS795 0.79 ABID97_RS08455 3-isopropylmalate dehydrogenase 0.70 ABID97_RS19805 chorismate synthase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.77 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.77 GFF5239 Chorismate synthase (EC 4.2.3.5) 0.89 6
Castellaniella sp019104865 MT123 0.75 ABCV34_RS04280 3-isopropylmalate dehydrogenase 0.76 ABCV34_RS04300 chorismate synthase — —
Dechlorosoma suillum PS 0.68 Dsui_3198 3-isopropylmalate dehydrogenase 0.77 Dsui_3204 chorismate synthase — —
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_20635 3-isopropylmalate dehydrogenase 0.65 AO353_02250 chorismate synthase low > 101
Pseudomonas fluorescens FW300-N1B4 0.65 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.65 Pf1N1B4_3780 Chorismate synthase (EC 4.2.3.5) — —
Pseudomonas putida KT2440 0.64 PP_1988 3-isopropylmalate dehydrogenase 0.66 PP_1830 Chorismate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.64 Pf6N2E2_5822 Chorismate synthase (EC 4.2.3.5) — —
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_21415 3-isopropylmalate dehydrogenase 0.64 AO356_19540 chorismate synthase — —
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.65 PfGW456L13_4165 Chorismate synthase (EC 4.2.3.5) 0.72 63
Pseudomonas sp. RS175 0.64 PFR28_02821 3-isopropylmalate dehydrogenase 0.64 PFR28_03126 Chorismate synthase — —
Marinobacter adhaerens HP15 0.64 HP15_1832 3-isopropylmalate dehydrogenase 0.71 HP15_1838 chorismate synthase — —
Pseudomonas simiae WCS417 0.64 PS417_18585 3-isopropylmalate dehydrogenase 0.64 PS417_19315 chorismate synthase — —
Pseudomonas fluorescens SBW25 0.63 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.64 PFLU_RS21280 chorismate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.64 PFLU_RS21280 chorismate synthase — —
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_1322 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.47 B158DRAFT_2433 chorismate synthase (EC 4.2.3.5) low > 40
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_1985 3-isopropylmalate dehydrogenase 0.65 Psyr_1853 chorismate synthase — —
Pseudomonas stutzeri RCH2 0.63 Psest_2589 3-isopropylmalate dehydrogenase 0.65 Psest_1903 chorismate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_1985 3-isopropylmalate dehydrogenase 0.65 Psyr_1853 chorismate synthase — —
Pseudomonas sp. S08-1 0.62 OH686_04470 3-isopropylmalate dehydrogenase 0.66 OH686_00675 chorismate synthase — —
Sphingomonas koreensis DSMZ 15582 0.60 Ga0059261_3190 3-isopropylmalate dehydrogenase 0.48 Ga0059261_2470 chorismate synthase (EC 4.2.3.5) — —
Xanthomonas campestris pv. campestris strain 8004 0.60 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.67 Xcc-8004.1955.1 Chorismate synthase (EC 4.2.3.5) 0.83 26
Acinetobacter radioresistens SK82 0.59 MPMX26_00348 3-isopropylmalate dehydrogenase 0.58 MPMX26_01340 Chorismate synthase — —
Desulfovibrio vulgaris Miyazaki F 0.57 DvMF_1794 3-isopropylmalate dehydrogenase (RefSeq) 0.45 DvMF_1408 chorismate synthase (RefSeq) — —
Synechococcus elongatus PCC 7942 0.56 Synpcc7942_1505 leuB 3-isopropylmalate dehydrogenase 0.45 Synpcc7942_0212 aroC chorismate synthase — —
Desulfovibrio vulgaris Hildenborough JW710 0.54 DVU2985 leuB 3-isopropylmalate dehydrogenase (TIGR) 0.47 DVU0894 aroC chorismate synthase (TIGR) — —
Phaeobacter inhibens DSM 17395 0.54 PGA1_c29830 3-isopropylmalate dehydrogenase LeuB 0.53 PGA1_c34060 chorismate synthase AroC — —
Dinoroseobacter shibae DFL-12 0.52 Dshi_0081 3-isopropylmalate dehydrogenase (RefSeq) 0.54 Dshi_3275 Chorismate synthase (RefSeq) — —
Magnetospirillum magneticum AMB-1 0.52 AMB_RS20570 3-isopropylmalate dehydrogenase 0.57 AMB_RS08025 chorismate synthase — —
Rhizobium sp. OAE497 0.52 ABIE40_RS19050 3-isopropylmalate dehydrogenase 0.50 ABIE40_RS03980 chorismate synthase — —
Azospirillum sp. SherDot2 0.51 MPMX19_00607 3-isopropylmalate dehydrogenase 0.56 MPMX19_01810 Chorismate synthase — —
Bosea sp. OAE506 0.51 ABIE41_RS11860 3-isopropylmalate dehydrogenase 0.53 ABIE41_RS10190 chorismate synthase — —
Serratia liquefaciens MT49 0.51 IAI46_03350 3-isopropylmalate dehydrogenase 0.63 IAI46_18025 chorismate synthase 0.67 20
Rhodospirillum rubrum S1H 0.51 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI) 0.56 Rru_A2623 Chorismate synthase (NCBI) — —
Alteromonas macleodii MIT1002 0.51 MIT1002_00948 3-isopropylmalate dehydrogenase 0.66 MIT1002_01229 Chorismate synthase — —
Sinorhizobium meliloti 1021 0.50 SMc04405 3-isopropylmalate dehydrogenase 0.50 SMc00007 chorismate synthase — —
Klebsiella michiganensis M5al 0.50 BWI76_RS04675 3-isopropylmalate dehydrogenase 0.61 BWI76_RS20435 chorismate synthase 0.65 68
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF165 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.63 GFF1950 Chorismate synthase (EC 4.2.3.5) low > 78
Rahnella sp. WP5 0.50 EX31_RS03685 3-isopropylmalate dehydrogenase 0.63 EX31_RS19685 chorismate synthase — —
Dickeya dianthicola ME23 0.50 DZA65_RS19205 3-isopropylmalate dehydrogenase 0.63 DZA65_RS15465 chorismate synthase — —
Agrobacterium fabrum C58 0.49 Atu2791 3-isopropylmalate dehydrogenase 0.48 Atu0754 chorismate synthase — —
Pectobacterium carotovorum WPP14 0.49 HER17_RS03080 3-isopropylmalate dehydrogenase 0.63 HER17_RS06935 chorismate synthase 0.93 45
Enterobacter sp. TBS_079 0.49 MPMX20_00768 3-isopropylmalate dehydrogenase 0.61 MPMX20_03264 Chorismate synthase 0.83 43
Dickeya dianthicola 67-19 0.49 HGI48_RS18060 3-isopropylmalate dehydrogenase 0.63 HGI48_RS14530 chorismate synthase — —
Dickeya dadantii 3937 0.49 DDA3937_RS18120 3-isopropylmalate dehydrogenase 0.62 DDA3937_RS14580 chorismate synthase — —
Enterobacter asburiae PDN3 0.49 EX28DRAFT_3669 3-isopropylmalate dehydrogenase 0.61 EX28DRAFT_0275 chorismate synthase (EC 4.2.3.5) — —
Escherichia coli Nissle 1917 0.49 ECOLIN_RS00395 3-isopropylmalate dehydrogenase 0.62 ECOLIN_RS13490 chorismate synthase — —
Azospirillum brasilense Sp245 0.49 AZOBR_RS14130 3-isopropylmalate dehydrogenase 0.58 AZOBR_RS10730 chorismate synthase — —
Escherichia fergusonii Becca 0.49 EFB2_03972 3-isopropylmalate dehydrogenase 0.62 EFB2_01529 Chorismate synthase low > 86
Escherichia coli ECOR38 0.49 HEPCGN_08700 leuB 3-isopropylmalate dehydrogenase 0.62 HEPCGN_21820 aroC chorismate synthase 0.94 42
Escherichia coli ECRC98 0.49 JDDGAC_14315 leuB 3-isopropylmalate dehydrogenase 0.62 JDDGAC_26575 aroC chorismate synthase 0.96 15
Escherichia coli ECRC99 0.49 KEDOAH_17435 leuB 3-isopropylmalate dehydrogenase 0.62 KEDOAH_05580 aroC chorismate synthase — —
Escherichia coli ECRC100 0.49 OKFHMN_10720 leuB 3-isopropylmalate dehydrogenase 0.62 OKFHMN_22615 aroC chorismate synthase 0.96 47
Escherichia coli ECRC101 0.49 MCAODC_01235 leuB 3-isopropylmalate dehydrogenase 0.62 MCAODC_13655 aroC chorismate synthase 0.78 66
Escherichia coli ECRC102 0.49 NIAGMN_08570 leuB 3-isopropylmalate dehydrogenase 0.62 NIAGMN_20390 aroC chorismate synthase — —
Escherichia coli BW25113 0.49 b0073 leuB 3-isopropylmalate dehydrogenase (VIMSS) 0.62 b2329 aroC chorismate synthase (NCBI) 0.89 47
Escherichia coli BL21 0.49 ECD_00075 3-isopropylmalate dehydrogenase, NAD(+)-dependent 0.62 ECD_02254 chorismate synthase 0.71 60
Escherichia coli ECOR27 0.49 NOLOHH_03065 leuA 2-isopropylmalate synthase 0.62 NOLOHH_14250 aroC chorismate synthase 0.96 17
Escherichia coli ECRC62 0.49 BNILDI_08545 leuA 2-isopropylmalate synthase 0.62 BNILDI_13170 aroC chorismate synthase 0.90 63
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_03584 3-isopropylmalate dehydrogenase 0.62 OHPLBJKB_01376 Chorismate synthase low > 73
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_12600 3-isopropylmalate dehydrogenase 0.64 CSW01_10560 chorismate synthase low > 62
Shewanella loihica PV-4 0.48 Shew_3471 3-isopropylmalate dehydrogenase (RefSeq) 0.63 Shew_2416 chorismate synthase (RefSeq) low > 60
Rhodopseudomonas palustris CGA009 0.48 TX73_001175 3-isopropylmalate dehydrogenase 0.54 TX73_006170 chorismate synthase — —
Pedobacter sp. GW460-11-11-14-LB5 0.48 CA265_RS15850 3-isopropylmalate dehydrogenase 0.45 CA265_RS11645 chorismate synthase — —
Shewanella sp. ANA-3 0.48 Shewana3_3760 3-isopropylmalate dehydrogenase (RefSeq) 0.62 Shewana3_1469 chorismate synthase (RefSeq) 0.90 38
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_00193 3-isopropylmalate dehydrogenase 0.47 CCNA_03256 chorismate synthase low > 67
Caulobacter crescentus NA1000 0.48 CCNA_00193 3-isopropylmalate dehydrogenase 0.47 CCNA_03256 chorismate synthase low > 66
Pantoea sp. MT58 0.47 IAI47_16005 3-isopropylmalate dehydrogenase 0.61 IAI47_06150 chorismate synthase — —
Erwinia tracheiphila SCR3 0.47 LU632_RS02875 leuB 3-isopropylmalate dehydrogenase 0.65 LU632_RS07775 aroC chorismate synthase 0.71 40
Mucilaginibacter yixingensis YX-36 DSM 26809 0.47 ABZR88_RS11605 3-isopropylmalate dehydrogenase 0.43 ABZR88_RS06995 chorismate synthase — —
Shewanella amazonensis SB2B 0.47 Sama_0336 3-isopropylmalate dehydrogenase (RefSeq) 0.65 Sama_2159 chorismate synthase (RefSeq) — —
Lysobacter sp. OAE881 0.44 ABIE51_RS17585 3-isopropylmalate dehydrogenase 0.65 ABIE51_RS08220 chorismate synthase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_2062 3-isopropylmalate dehydrogenase 0.47 Echvi_1518 chorismate synthase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.43 CA264_09445 3-isopropylmalate dehydrogenase 0.43 CA264_19835 chorismate synthase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS09995 3-isopropylmalate dehydrogenase 0.50 A4249_RS08790 chorismate synthase — —
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase 0.67 OKGIIK_04805 aroC chorismate synthase low > 52
Rhodanobacter denitrificans MT42 0.41 LRK55_RS09965 3-isopropylmalate dehydrogenase 0.66 LRK55_RS01505 chorismate synthase low > 63
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS10325 3-isopropylmalate dehydrogenase 0.66 LRK54_RS01725 chorismate synthase — —
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS15950 3-isopropylmalate dehydrogenase 0.70 ABZR86_RS08040 chorismate synthase 0.87 72
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS16640 3-isopropylmalate dehydrogenase 0.43 HMPREF1078_RS16710 chorismate synthase low > 61
Phocaeicola vulgatus CL09T03C04 0.39 HMPREF1058_RS14565 3-isopropylmalate dehydrogenase 0.39 HMPREF1058_RS16730 chorismate synthase low > 67
Phocaeicola dorei CL03T12C01 0.39 ABI39_RS10215 3-isopropylmalate dehydrogenase 0.39 ABI39_RS12645 chorismate synthase 0.84 11
Bacteroides ovatus ATCC 8483 0.39 BACOVA_04600 3-isopropylmalate dehydrogenase 0.38 BACOVA_03296 chorismate synthase low > 94
Bacteroides stercoris CC31F 0.39 HMPREF1181_RS14125 3-isopropylmalate dehydrogenase 0.39 HMPREF1181_RS08365 chorismate synthase — —
Bacteroides thetaiotaomicron VPI-5482 0.39 BT1857 3-isopropylmalate dehydrogenase (NCBI ptt file) 0.38 BT2084 chorismate synthase (NCBI ptt file) — —
Methanococcus maripaludis S2 0.30 MMP_RS04575 homoisocitrate dehydrogenase 0.34 MMP_RS06880 chorismate synthase — —

Not shown: 1 genomes with orthologs for BPHYT_RS33900 only; 4 genomes with orthologs for BPHYT_RS13705 only