Conservation of cofitness between BPHYT_RS06405 and BPHYT_RS03640 in Burkholderia phytofirmans PsJN

93 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS06405 phosphoribosylamine--glycine ligase 1.0 BPHYT_RS03640 phosphoribosylformylglycinamidine cyclo-ligase 0.82 15
Paraburkholderia graminis OAS925 0.98 ABIE53_001545 phosphoribosylamine--glycine ligase 0.99 ABIE53_000874 phosphoribosylformylglycinamidine cyclo-ligase — —
Paraburkholderia bryophila 376MFSha3.1 0.98 H281DRAFT_04521 phosphoribosylamine--glycine ligase 0.91 H281DRAFT_04710 phosphoribosylformylglycinamidine cyclo-ligase — —
Paraburkholderia sabiae LMG 24235 0.92 QEN71_RS24400 phosphoribosylamine--glycine ligase 0.92 QEN71_RS26445 phosphoribosylformylglycinamidine cyclo-ligase 0.95 1
Herbaspirillum seropedicae SmR1 0.80 HSERO_RS17755 phosphoribosylamine--glycine ligase 0.76 HSERO_RS03165 phosphoribosylaminoimidazole synthetase — —
Ralstonia solanacearum GMI1000 0.78 RS_RS10995 phosphoribosylamine--glycine ligase 0.73 RS_RS13145 phosphoribosylformylglycinamidine cyclo-ligase — —
Ralstonia sp. UNC404CL21Col 0.78 ABZR87_RS15410 phosphoribosylamine--glycine ligase 0.75 ABZR87_RS00915 phosphoribosylformylglycinamidine cyclo-ligase — —
Ralstonia solanacearum PSI07 0.77 RPSI07_RS13680 phosphoribosylamine--glycine ligase 0.73 RPSI07_RS12020 phosphoribosylformylglycinamidine cyclo-ligase — —
Ralstonia solanacearum IBSBF1503 0.76 RALBFv3_RS03545 phosphoribosylamine--glycine ligase 0.72 RALBFv3_RS05280 phosphoribosylformylglycinamidine cyclo-ligase — —
Ralstonia solanacearum UW163 0.76 UW163_RS10125 phosphoribosylamine--glycine ligase 0.72 UW163_RS08345 phosphoribosylformylglycinamidine cyclo-ligase — —
Cupriavidus basilensis FW507-4G11 0.74 RR42_RS04730 phosphoribosylamine--glycine ligase 0.79 RR42_RS17220 phosphoribosylaminoimidazole synthetase — —
Dechlorosoma suillum PS 0.73 Dsui_1596 phosphoribosylamine--glycine ligase 0.74 Dsui_1519 phosphoribosylaminoimidazole synthetase — —
Variovorax sp. SCN45 0.72 GFF302 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.67 GFF3941 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.91 4
Variovorax sp. OAS795 0.70 ABID97_RS16735 phosphoribosylamine--glycine ligase 0.66 ABID97_RS08700 phosphoribosylformylglycinamidine cyclo-ligase — —
Acidovorax sp. GW101-3H11 0.68 Ac3H11_2421 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.65 Ac3H11_1318 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Castellaniella sp019104865 MT123 0.68 ABCV34_RS02550 phosphoribosylamine--glycine ligase 0.65 ABCV34_RS08795 phosphoribosylformylglycinamidine cyclo-ligase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF4524 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.64 GFF3433 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_04044 Phosphoribosylamine--glycine ligase 0.58 OHPLBJKB_01227 Phosphoribosylformylglycinamidine cyclo-ligase low > 73
Escherichia coli BL21 0.60 ECD_03882 phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase 0.58 ECD_02391 phosphoribosylaminoimidazole synthetase 0.94 4
Escherichia coli Nissle 1917 0.60 ECOLIN_RS23095 phosphoribosylamine--glycine ligase 0.58 ECOLIN_RS14190 phosphoribosylformylglycinamidine cyclo-ligase 0.96 3
Escherichia fergusonii Becca 0.60 EFB2_04605 Phosphoribosylamine--glycine ligase 0.58 EFB2_01399 Phosphoribosylformylglycinamidine cyclo-ligase low > 86
Escherichia coli ECRC62 0.59 BNILDI_06060 purD Phosphoribosylamine--glycine ligase 0.58 BNILDI_12270 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.99 3
Pantoea sp. MT58 0.59 IAI47_18045 phosphoribosylamine--glycine ligase 0.59 IAI47_05180 phosphoribosylformylglycinamidine cyclo-ligase 0.98 2
Escherichia coli ECOR27 0.59 NOLOHH_05460 purD Phosphoribosylamine--glycine ligase 0.58 NOLOHH_13460 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.91 21
Pseudomonas putida KT2440 0.59 PP_4823 Phosphoribosylamine--glycine ligase 0.60 PP_1665 Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli ECOR38 0.59 HEPCGN_11955 purD Phosphoribosylamine--glycine ligase 0.58 HEPCGN_20975 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.97 4
Escherichia coli ECRC98 0.59 JDDGAC_16940 purD Phosphoribosylamine--glycine ligase 0.58 JDDGAC_25755 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.75 6
Escherichia coli ECRC101 0.59 MCAODC_03815 purD Phosphoribosylamine--glycine ligase 0.58 MCAODC_12340 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.91 7
Escherichia coli ECRC102 0.59 NIAGMN_11065 purD Phosphoribosylamine--glycine ligase 0.58 NIAGMN_19580 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli ECRC99 0.59 KEDOAH_14845 purD Phosphoribosylamine--glycine ligase 0.58 KEDOAH_06410 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli ECRC100 0.59 OKFHMN_13315 purD Phosphoribosylamine--glycine ligase 0.58 OKFHMN_21810 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.97 3
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF4187 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.58 GFF2169 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.53 28
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0167 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.60 B158DRAFT_2385 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_3520 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.60 Pf6N2E2_5729 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Klebsiella michiganensis M5al 0.59 BWI76_RS01610 phosphoribosylamine--glycine ligase 0.58 BWI76_RS20965 phosphoribosylformylglycinamidine cyclo-ligase 0.88 7
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_1316 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.60 Pf1N1B4_3698 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Escherichia coli BW25113 0.59 b4005 purD phosphoribosylamine--glycine ligase (NCBI) 0.58 b2499 purM phosphoribosylaminoimidazole synthetase (NCBI) 0.97 4
Pseudomonas sp. RS175 0.59 PFR28_05213 Phosphoribosylamine--glycine ligase 0.60 PFR28_03217 Phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_08230 phosphoribosylamine--glycine ligase 0.60 AO356_19090 phosphoribosylaminoimidazole synthetase — —
Pseudomonas fluorescens SBW25 0.58 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.60 PFLU_RS22065 phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.60 PFLU_RS22065 phosphoribosylformylglycinamidine cyclo-ligase — —
Enterobacter sp. TBS_079 0.58 MPMX20_00225 Phosphoribosylamine--glycine ligase 0.60 MPMX20_03354 Phosphoribosylformylglycinamidine cyclo-ligase 0.97 3
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_01415 phosphoribosylamine--glycine ligase 0.57 CSW01_11350 phosphoribosylformylglycinamidine cyclo-ligase 0.45 53
Erwinia tracheiphila SCR3 0.58 LU632_RS01015 purD phosphoribosylamine--glycine ligase 0.59 LU632_RS08275 purM phosphoribosylformylglycinamidine cyclo-ligase 0.95 2
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_58 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.60 PfGW456L13_4252 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Acinetobacter radioresistens SK82 0.58 MPMX26_01140 Phosphoribosylamine--glycine ligase 0.60 MPMX26_02206 Phosphoribosylformylglycinamidine cyclo-ligase 0.98 2
Pseudomonas sp. S08-1 0.58 OH686_07625 Phosphoribosylamine--glycine ligase 0.58 OH686_18995 Phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_13645 phosphoribosylamine--glycine ligase 0.60 AO353_02680 phosphoribosylaminoimidazole synthetase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_4407 phosphoribosylamine--glycine ligase 0.60 Psyr_3689 phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_4407 phosphoribosylamine--glycine ligase 0.60 Psyr_3689 phosphoribosylformylglycinamidine cyclo-ligase — —
Enterobacter asburiae PDN3 0.58 EX28DRAFT_4544 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.60 EX28DRAFT_0168 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Dickeya dadantii 3937 0.58 DDA3937_RS01215 phosphoribosylamine--glycine ligase 0.59 DDA3937_RS06025 phosphoribosylformylglycinamidine cyclo-ligase 0.92 5
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.657.1 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.55 Xcc-8004.1676.1 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.92 3
Pseudomonas stutzeri RCH2 0.58 Psest_1013 phosphoribosylamine--glycine ligase 0.59 Psest_1474 phosphoribosylaminoimidazole synthetase 0.91 2
Marinobacter adhaerens HP15 0.58 HP15_3228 phosphoribosylamine-glycine ligase 0.57 HP15_1299 phosphoribosylaminoimidazole synthetase — —
Dickeya dianthicola ME23 0.57 DZA65_RS01255 phosphoribosylamine--glycine ligase 0.58 DZA65_RS06420 phosphoribosylformylglycinamidine cyclo-ligase 0.95 3
Pseudomonas simiae WCS417 0.57 PS417_02935 phosphoribosylamine--glycine ligase 0.60 PS417_20120 phosphoribosylaminoimidazole synthetase — —
Dickeya dianthicola 67-19 0.57 HGI48_RS01210 phosphoribosylamine--glycine ligase 0.58 HGI48_RS06070 phosphoribosylformylglycinamidine cyclo-ligase 0.87 4
Lysobacter sp. OAE881 0.57 ABIE51_RS17770 phosphoribosylamine--glycine ligase 0.54 ABIE51_RS15890 phosphoribosylformylglycinamidine cyclo-ligase 0.93 3
Rahnella sp. WP5 0.57 EX31_RS16855 phosphoribosylamine--glycine ligase 0.59 EX31_RS22695 phosphoribosylformylglycinamidine cyclo-ligase 0.97 4
Pectobacterium carotovorum WPP14 0.57 HER17_RS20340 phosphoribosylamine--glycine ligase 0.61 HER17_RS15465 phosphoribosylformylglycinamidine cyclo-ligase 0.96 5
Alteromonas macleodii MIT1002 0.56 MIT1002_03961 Phosphoribosylamine--glycine ligase 0.58 MIT1002_02219 Phosphoribosylformylglycinamidine cyclo-ligase 0.99 9
Serratia liquefaciens MT49 0.56 IAI46_01360 phosphoribosylamine--glycine ligase 0.59 IAI46_18885 phosphoribosylformylglycinamidine cyclo-ligase 0.58 15
Shewanella amazonensis SB2B 0.56 Sama_0394 phosphoribosylamine--glycine ligase (RefSeq) 0.56 Sama_2097 phosphoribosylaminoimidazole synthetase (RefSeq) 0.98 2
Shewanella sp. ANA-3 0.55 Shewana3_0440 phosphoribosylamine--glycine ligase (RefSeq) 0.56 Shewana3_2545 phosphoribosylaminoimidazole synthetase (RefSeq) 0.95 5
Shewanella oneidensis MR-1 0.54 SO0441 purD phosphoribosylamine--glycine ligase (NCBI ptt file) 0.57 SO2760 purM phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) 0.97 6
Shewanella loihica PV-4 0.53 Shew_3413 phosphoribosylamine--glycine ligase (RefSeq) 0.57 Shew_1513 phosphoribosylaminoimidazole synthetase (RefSeq) — —
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS13850 phosphoribosylamine--glycine ligase 0.54 ABZR86_RS19865 phosphoribosylformylglycinamidine cyclo-ligase low > 74
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_13750 purD phosphoribosylamine--glycine ligase 0.51 OKGIIK_02315 purM phosphoribosylformylglycinamidine cyclo-ligase 0.73 11
Rhodanobacter denitrificans MT42 0.51 LRK55_RS09805 phosphoribosylamine--glycine ligase 0.53 LRK55_RS12645 phosphoribosylformylglycinamidine cyclo-ligase low > 63
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS10165 phosphoribosylamine--glycine ligase 0.53 LRK54_RS12945 phosphoribosylformylglycinamidine cyclo-ligase low > 59
Agrobacterium fabrum C58 0.48 Atu0647 phosphoribosylamine--glycine ligase 0.52 Atu1141 Phosphoribosylglycinamide synthetase 0.96 2
Bosea sp. OAE506 0.47 ABIE41_RS23160 phosphoribosylamine--glycine ligase 0.49 ABIE41_RS17040 phosphoribosylformylglycinamidine cyclo-ligase 0.88 1
Rhizobium sp. OAE497 0.47 ABIE40_RS05430 phosphoribosylamine--glycine ligase 0.52 ABIE40_RS06560 phosphoribosylformylglycinamidine cyclo-ligase 0.90 24
Azospirillum sp. SherDot2 0.47 MPMX19_01630 Phosphoribosylamine--glycine ligase 0.54 MPMX19_01304 Phosphoribosylformylglycinamidine cyclo-ligase 0.89 2
Rhodopseudomonas palustris CGA009 0.46 TX73_005965 phosphoribosylamine--glycine ligase 0.49 TX73_015785 phosphoribosylformylglycinamidine cyclo-ligase — —
Azospirillum brasilense Sp245 0.46 AZOBR_RS04470 phosphoribosylamine--glycine ligase 0.54 AZOBR_RS16290 phosphoribosylaminoimidazole synthetase — —
Sinorhizobium meliloti 1021 0.45 SMc00993 phosphoribosylamine--glycine ligase 0.50 SMc00615 phosphoribosylaminoimidazole synthetase 0.98 2
Desulfovibrio vulgaris Hildenborough JW710 0.44 DVU0488 purD phosphoribosylamine--glycine ligase (TIGR) 0.48 DVU1406 purM phosphoribosylformylglycinamidine cyclo-ligase (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.44 DvMF_1722 phosphoribosylamine--glycine ligase (RefSeq) 0.51 DvMF_0202 phosphoribosylaminoimidazole synthetase (RefSeq) — —
Magnetospirillum magneticum AMB-1 0.44 AMB_RS01075 phosphoribosylamine--glycine ligase 0.56 AMB_RS14330 phosphoribosylformylglycinamidine cyclo-ligase — —
Rhodospirillum rubrum S1H 0.43 Rru_A0646 Phosphoribosylamine--glycine ligase (NCBI) 0.53 Rru_A2167 Phosphoribosylformylglycinamidine cyclo-ligase (NCBI) — —
Phaeobacter inhibens DSM 17395 0.43 PGA1_c23610 phosphoribosylamine--glycine ligase PurD 0.53 PGA1_c13260 phosphoribosylformylglycinamidine cyclo-ligase PurM 0.92 2
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_00299 phosphoribosylamine--glycine ligase 0.53 CCNA_01775 phosphoribosylformylglycinamidine cyclo-ligase low > 67
Caulobacter crescentus NA1000 0.42 CCNA_00299 phosphoribosylamine--glycine ligase 0.53 CCNA_01775 phosphoribosylformylglycinamidine cyclo-ligase 0.96 1
Dinoroseobacter shibae DFL-12 0.42 Dshi_2728 phosphoribosylamine--glycine ligase (RefSeq) 0.53 Dshi_1889 phosphoribosylformylglycinamidine cyclo-ligase (RefSeq) 0.94 2
Bifidobacterium breve UCC2003 0.41 BBR_RS13370 phosphoribosylamine--glycine ligase 0.46 BBR_RS13375 phosphoribosylformylglycinamidine cyclo-ligase 0.84 2
Synechococcus elongatus PCC 7942 0.41 Synpcc7942_0925 purD phosphoribosylamine--glycine ligase 0.48 Synpcc7942_0851 purM phosphoribosylaminoimidazole synthetase — —
Fusobacterium nucleatum SB010 0.40 HUW76_05205 phosphoribosylamine--glycine ligase 0.44 HUW76_05175 phosphoribosylformylglycinamidine cyclo-ligase 0.99 4
Brevundimonas sp. GW460-12-10-14-LB2 0.40 A4249_RS09255 phosphoribosylamine--glycine ligase 0.50 A4249_RS08210 phosphoribosylformylglycinamidine cyclo-ligase — —
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_1441 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.51 Ga0059261_0228 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Mycobacterium tuberculosis H37Rv 0.32 Rv0772 Probable phosphoribosylamine--glycine ligase PurD (GARS) (glycinamide ribonucleotide synthetase) (phosphoribosylglycinamide synthetase) (5'-phosphoribosylglycinamide synthetase) 0.39 Rv0809 Probable phosphoribosylformylglycinamidine CYCLO-ligase PurM (AIRS) (phosphoribosyl-aminoimidazole synthetase) (air synthase) — —
Methanococcus maripaludis JJ 0.24 MMJJ_RS03210 phosphoribosylamine--glycine ligase 0.30 MMJJ_RS07900 phosphoribosylformylglycinamidine cyclo-ligase — —
Methanococcus maripaludis S2 0.24 MMP_RS02095 phosphoribosylamine--glycine ligase 0.30 MMP_RS06450 phosphoribosylformylglycinamidine cyclo-ligase — —

Not shown: 10 genomes with orthologs for BPHYT_RS06405 only; 0 genomes with orthologs for BPHYT_RS03640 only