Conservation of cofitness between BNILDI_11900 and BNILDI_11985 in Escherichia coli ECRC62

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_11900 pdxJ pyridoxine 5'-phosphate synthase 1.0 BNILDI_11985 glyA serine hydroxymethyltransferase 0.91 1
Escherichia coli ECRC98 1.00 JDDGAC_25090 pdxJ pyridoxine 5'-phosphate synthase 1.00 JDDGAC_25175 glyA serine hydroxymethyltransferase — —
Escherichia coli ECRC102 1.00 NIAGMN_19195 pdxJ pyridoxine 5'-phosphate synthase 1.00 NIAGMN_19280 glyA serine hydroxymethyltransferase — —
Escherichia coli ECOR27 1.00 NOLOHH_13100 pdxJ pyridoxine 5'-phosphate synthase 1.00 NOLOHH_13185 glyA serine hydroxymethyltransferase low > 75
Escherichia coli ECRC101 1.00 MCAODC_11955 pdxJ pyridoxine 5'-phosphate synthase 1.00 MCAODC_12040 glyA serine hydroxymethyltransferase low > 87
Escherichia coli ECRC100 1.00 OKFHMN_21425 pdxJ pyridoxine 5'-phosphate synthase 1.00 OKFHMN_21510 glyA serine hydroxymethyltransferase low > 80
Escherichia coli BL21 1.00 ECD_02458 pyridoxine 5'-phosphate synthase 1.00 ECD_02443 serine hydroxymethyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01143 'Pyridoxine 5'-phosphate synthase' transl_table=11 1.00 OHPLBJKB_01156 Serine hydroxymethyltransferase low > 73
Escherichia coli BW25113 1.00 b2564 pdxJ pyridoxal phosphate biosynthetic protein (NCBI) 1.00 b2551 glyA serine hydroxymethyltransferase (NCBI) — —
Escherichia coli ECRC99 1.00 KEDOAH_06795 pdxJ pyridoxine 5'-phosphate synthase 1.00 KEDOAH_06710 glyA serine hydroxymethyltransferase — —
Escherichia coli ECOR38 0.99 HEPCGN_20570 pdxJ pyridoxine 5'-phosphate synthase 1.00 HEPCGN_20655 glyA serine hydroxymethyltransferase low > 87
Escherichia fergusonii Becca 0.99 EFB2_01332 Pyridoxine 5'-phosphate synthase 1.00 EFB2_01345 Serine hydroxymethyltransferase — —
Escherichia coli Nissle 1917 0.98 ECOLIN_RS14515 pyridoxine 5'-phosphate synthase 1.00 ECOLIN_RS14440 serine hydroxymethyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF2472 'Pyridoxine 5'-phosphate synthase (EC 2.6.99.2)' transl_table=11 0.92 GFF2447 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Klebsiella michiganensis M5al 0.94 BWI76_RS21305 pyridoxine 5'-phosphate synthase 0.93 BWI76_RS21225 serine hydroxymethyltransferase — —
Enterobacter asburiae PDN3 0.93 EX28DRAFT_0082 pyridoxine 5'-phosphate synthase 0.93 EX28DRAFT_0099 Glycine/serine hydroxymethyltransferase — —
Enterobacter sp. TBS_079 0.93 MPMX20_03435 Pyridoxine 5'-phosphate synthase 0.92 MPMX20_03420 Serine hydroxymethyltransferase — —
Dickeya dianthicola ME23 0.81 DZA65_RS16885 pyridoxine 5'-phosphate synthase 0.93 DZA65_RS16775 serine hydroxymethyltransferase — —
Dickeya dianthicola 67-19 0.81 HGI48_RS15805 pyridoxine 5'-phosphate synthase 0.92 HGI48_RS15700 serine hydroxymethyltransferase — —
Dickeya dadantii 3937 0.81 DDA3937_RS15720 pyridoxine 5'-phosphate synthase 0.93 DDA3937_RS15600 serine hydroxymethyltransferase — —
Pectobacterium carotovorum WPP14 0.80 HER17_RS05830 pyridoxine 5'-phosphate synthase 0.92 HER17_RS05950 serine hydroxymethyltransferase — —
Pantoea sp. MT58 0.79 IAI47_04895 pyridoxine 5'-phosphate synthase 0.90 IAI47_04960 serine hydroxymethyltransferase — —
Rahnella sp. WP5 0.78 EX31_RS21850 pyridoxine 5'-phosphate synthase 0.92 EX31_RS20585 serine hydroxymethyltransferase — —
Serratia liquefaciens MT49 0.78 IAI46_19535 pyridoxine 5'-phosphate synthase 0.94 IAI46_19395 serine hydroxymethyltransferase — —
Erwinia tracheiphila SCR3 0.76 LU632_RS15370 pdxJ pyridoxine 5'-phosphate synthase 0.92 LU632_RS17915 serine hydroxymethyltransferase — —
Kangiella aquimarina DSM 16071 0.74 B158DRAFT_2190 pyridoxine 5'-phosphate synthase 0.74 B158DRAFT_1908 Glycine/serine hydroxymethyltransferase — —
Alteromonas macleodii MIT1002 0.73 MIT1002_00791 Pyridoxine 5'-phosphate synthase 0.77 MIT1002_02702 Serine hydroxymethyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_12440 pyridoxine 5'-phosphate synthase 0.80 CSW01_04820 serine hydroxymethyltransferase — —
Shewanella loihica PV-4 0.67 Shew_1057 pyridoxal phosphate biosynthetic protein PdxJ (RefSeq) 0.85 Shew_1185 glyA serine hydroxymethyltransferase (RefSeq) — —
Shewanella sp. ANA-3 0.67 Shewana3_3023 pyridoxine 5'-phosphate synthase (RefSeq) 0.87 Shewana3_1094 glyA serine hydroxymethyltransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.67 SO1351 pdxJ pyridoxal phosphate biosynthetic protein PdxJ (NCBI ptt file) 0.86 SO3471 glyA serine hydroxymethyltransferase (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.66 Sama_0883 pyridoxine 5'-phosphate synthase (RefSeq) 0.87 Sama_1014 glyA serine hydroxymethyltransferase (RefSeq) — —
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS04625 pyridoxine 5'-phosphate synthase 0.72 QEN71_RS33600 serine hydroxymethyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_04365 pyridoxine 5'-phosphate synthase 0.65 H281DRAFT_04726 serine hydroxymethyltransferase — —
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS14355 pyridoxine 5'-phosphate synthase 0.65 BPHYT_RS03725 serine hydroxymethyltransferase — —
Paraburkholderia graminis OAS925 0.64 ABIE53_003033 pyridoxine 5-phosphate synthase 0.65 ABIE53_000888 glycine hydroxymethyltransferase — —
Pseudomonas sp. RS175 0.63 PFR28_03520 'Pyridoxine 5'-phosphate synthase' transl_table=11 0.76 PFR28_03786 Serine hydroxymethyltransferase — —
Pseudomonas putida KT2440 0.63 PP_1436 Pyridoxine 5'-phosphate synthase 0.76 PP_0671 serine hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_889 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.75 Pf1N1B4_2778 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_4837 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.75 PfGW456L13_1451 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_17510 pyridoxine 5'-phosphate synthase 0.75 AO356_15725 serine hydroxymethyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_3948 pyridoxine 5'-phosphate synthase 0.77 Psyr_4270 serine hydroxymethyltransferase — —
Pseudomonas sp. S08-1 0.62 OH686_20095 pyridoxine 5'-phosphate synthase 0.76 OH686_16230 Serine hydroxymethyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_3948 pyridoxine 5'-phosphate synthase 0.77 Psyr_4270 serine hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_5429 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.75 Pf6N2E2_5082 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS14025 pyridoxine 5'-phosphate synthase 0.64 RR42_RS15485 serine hydroxymethyltransferase — —
Pseudomonas stutzeri RCH2 0.61 Psest_3089 pyridoxine 5'-phosphate synthase 0.75 Psest_3404 Glycine/serine hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_04495 pyridoxine 5'-phosphate synthase 0.75 AO353_14020 serine hydroxymethyltransferase — —
Pseudomonas simiae WCS417 0.60 PS417_05205 pyridoxine 5'-phosphate synthase 0.76 PS417_24280 serine hydroxymethyltransferase — —
Marinobacter adhaerens HP15 0.60 HP15_787 pyridoxal phosphate biosynthetic protein PdxJ 0.76 HP15_489 glycine hydroxymethyltransferase — —
Pseudomonas fluorescens SBW25 0.60 PFLU_RS05275 pyridoxine 5'-phosphate synthase 0.76 PFLU_RS26195 serine hydroxymethyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS05275 pyridoxine 5'-phosphate synthase 0.76 PFLU_RS26195 serine hydroxymethyltransferase — —
Acinetobacter radioresistens SK82 0.59 MPMX26_02152 Pyridoxine 5'-phosphate synthase 0.72 MPMX26_02049 Serine hydroxymethyltransferase — —
Ralstonia solanacearum UW163 0.58 UW163_RS11965 pyridoxine 5'-phosphate synthase 0.64 UW163_RS00670 serine hydroxymethyltransferase — —
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS14500 pyridoxine 5'-phosphate synthase 0.64 RALBFv3_RS12895 serine hydroxymethyltransferase — —
Ralstonia solanacearum GMI1000 0.57 RS_RS05280 pyridoxine 5'-phosphate synthase 0.64 RS_RS03670 serine hydroxymethyltransferase — —
Ralstonia solanacearum PSI07 0.57 RPSI07_RS18960 pyridoxine 5'-phosphate synthase 0.63 RPSI07_RS20330 serine hydroxymethyltransferase — —
Azospirillum sp. SherDot2 0.55 MPMX19_00840 Pyridoxine 5'-phosphate synthase 0.55 MPMX19_00727 Serine hydroxymethyltransferase 2 — —
Phaeobacter inhibens DSM 17395 0.55 PGA1_c01030 pyridoxine 5'-phosphate synthase PdxJ 0.56 PGA1_c11870 serine hydroxymethyltransferase GlyA — —
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS09675 pyridoxine 5'-phosphate synthase 0.63 HSERO_RS06140 serine hydroxymethyltransferase — —
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS10220 pyridoxine 5'-phosphate synthase 0.64 ABZR87_RS08955 serine hydroxymethyltransferase — —
Dinoroseobacter shibae DFL-12 0.54 Dshi_0196 pyridoxal phosphate biosynthetic protein PdxJ (RefSeq) 0.57 Dshi_0821 Glycine hydroxymethyltransferase (RefSeq) — —
Azospirillum brasilense Sp245 0.54 AZOBR_RS22055 pyridoxine 5'-phosphate synthase 0.56 AZOBR_RS10015 serine hydroxymethyltransferase — —
Dechlorosoma suillum PS 0.53 Dsui_2463 pyridoxine 5''-phosphate synthase 0.63 Dsui_1265 glycine/serine hydroxymethyltransferase — —
Synechococcus elongatus PCC 7942 0.52 Synpcc7942_1194 pdxJ pyridoxal phosphate biosynthetic protein PdxJ 0.59 Synpcc7942_0282 glyA serine hydroxymethyltransferase — —
Magnetospirillum magneticum AMB-1 0.52 AMB_RS11405 pyridoxine 5'-phosphate synthase 0.54 AMB_RS11815 serine hydroxymethyltransferase — —
Bosea sp. OAE506 0.52 ABIE41_RS19905 pyridoxine 5'-phosphate synthase 0.58 ABIE41_RS19780 serine hydroxymethyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.52 CCNA_01626 pyridoxal phosphate biosynthetic protein pdxJ 0.55 CCNA_01419 serine hydroxymethyltransferase — —
Caulobacter crescentus NA1000 0.52 CCNA_01626 pyridoxal phosphate biosynthetic protein pdxJ 0.55 CCNA_01419 serine hydroxymethyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.51 DVU1908 pdxJ pyridoxal phosphate biosynthetic protein PdxJ (TIGR) 0.57 DVU1203 glyA serine hydroxymethyltransferase (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.51 DvMF_0281 pyridoxine 5'-phosphate synthase (RefSeq) 0.57 DvMF_3097 glyA serine hydroxymethyltransferase (RefSeq) — —
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_2011 pyridoxine 5'-phosphate synthase 0.50 Ga0059261_1986 Glycine/serine hydroxymethyltransferase — —
Rhodospirillum rubrum S1H 0.50 Rru_A1854 Pyridoxal phosphate biosynthetic protein PdxJ (NCBI) 0.54 Rru_A1827 Glycine hydroxymethyltransferase (NCBI) low > 58
Castellaniella sp019104865 MT123 0.50 ABCV34_RS04215 pyridoxine 5'-phosphate synthase 0.70 ABCV34_RS06400 serine hydroxymethyltransferase — —
Rhodopseudomonas palustris CGA009 0.48 TX73_013960 pyridoxine 5'-phosphate synthase 0.54 TX73_014115 serine hydroxymethyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS05520 pyridoxine 5'-phosphate synthase 0.52 A4249_RS06040 serine hydroxymethyltransferase — —
Bacteroides ovatus ATCC 8483 0.33 BACOVA_01142 pyridoxine 5'-phosphate synthase 0.54 BACOVA_02446 glycine hydroxymethyltransferase 0.70 43
Bacteroides stercoris CC31F 0.33 HMPREF1181_RS06645 pyridoxine 5'-phosphate synthase 0.53 HMPREF1181_RS15010 serine hydroxymethyltransferase — —
Phocaeicola vulgatus CL09T03C04 0.33 HMPREF1058_RS08325 pyridoxine 5'-phosphate synthase 0.54 HMPREF1058_RS03800 serine hydroxymethyltransferase 0.83 24
Phocaeicola dorei CL03T12C01 0.33 ABI39_RS02500 pyridoxine 5'-phosphate synthase 0.54 ABI39_RS17420 serine hydroxymethyltransferase 0.86 4
Bacteroides thetaiotaomicron VPI-5482 0.32 BT3918 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) 0.54 BT0738 serine hydroxymethyltransferase (NCBI ptt file) 0.75 35
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS01795 pyridoxine 5'-phosphate synthase 0.51 ABZR88_RS00640 serine hydroxymethyltransferase — —
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS10265 pyridoxine 5'-phosphate synthase 0.52 HMPREF1078_RS02145 serine hydroxymethyltransferase low > 61
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS25170 pyridoxine 5'-phosphate synthase 0.54 CA265_RS19165 serine hydroxymethyltransferase — —
Agrobacterium fabrum C58 0.30 Atu2024 pyridoxal phosphate biosynthesis protein 0.59 Atu1165 serine hydroxymethyltransferase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.30 CA264_15275 pyridoxine 5'-phosphate synthase 0.53 CA264_17045 serine hydroxymethyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS15180 pyridoxine 5'-phosphate synthase 0.73 ABZR86_RS10715 serine hydroxymethyltransferase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.29 Echvi_0661 pyridoxine 5'-phosphate synthase 0.54 Echvi_1188 Glycine/serine hydroxymethyltransferase — —
Rhodanobacter denitrificans MT42 0.29 LRK55_RS08205 pyridoxine 5'-phosphate synthase 0.73 LRK55_RS04400 serine hydroxymethyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS08440 pyridoxine 5'-phosphate synthase 0.73 LRK54_RS04625 serine hydroxymethyltransferase — —
Sinorhizobium meliloti 1021 0.28 SMc01407 pyridoxine 5'-phosphate synthase 0.59 SMc01770 serine hydroxymethyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.17.1 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.73 Xcc-8004.4398.1 Serine hydroxymethyltransferase (EC 2.1.2.1) low > 74
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_15220 pyridoxine 5'-phosphate synthase 0.71 OKGIIK_11440 glyA serine hydroxymethyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF3349 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.62 GFF5152 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Lysobacter sp. OAE881 0.26 ABIE51_RS00810 pyridoxine 5'-phosphate synthase 0.72 ABIE51_RS04620 serine hydroxymethyltransferase — —
Rhizobium sp. OAE497 0.25 ABIE40_RS11420 pyridoxine 5'-phosphate synthase 0.60 ABIE40_RS06715 serine hydroxymethyltransferase — —
Acidovorax sp. GW101-3H11 0.25 Ac3H11_1563 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.63 Ac3H11_2921 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Variovorax sp. SCN45 0.22 GFF3873 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.63 GFF560 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Variovorax sp. OAS795 0.22 ABID97_RS08380 pyridoxine 5'-phosphate synthase 0.63 ABID97_RS17890 serine hydroxymethyltransferase — —

Not shown: 0 genomes with orthologs for BNILDI_11900 only; 1 genomes with orthologs for BNILDI_11985 only