Conservation of cofitness between Atu1308 and Atu3754 in Agrobacterium fabrum C58

99 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1308 aspartate carbamoyl transferase catalytic subunit 1.0 Atu3754 phosphoribosylaminoimidazole carboxylase catalytic subunit 0.90 9
Sinorhizobium meliloti 1021 0.91 SMc01360 aspartate carbamoyltransferase catalytic subunit 0.75 SMc04001 phosphoribosylaminoimidazole carboxylase catalytic subunit protein 0.76 63
Rhizobium sp. OAE497 0.89 ABIE40_RS07385 aspartate carbamoyltransferase catalytic subunit 0.77 ABIE40_RS16065 5-(carboxyamino)imidazole ribonucleotide mutase
Bosea sp. OAE506 0.75 ABIE41_RS17230 aspartate carbamoyltransferase catalytic subunit 0.68 ABIE41_RS09240 5-(carboxyamino)imidazole ribonucleotide mutase
Rhodopseudomonas palustris CGA009 0.68 TX73_016120 aspartate carbamoyltransferase catalytic subunit 0.64 TX73_021640 5-(carboxyamino)imidazole ribonucleotide mutase
Rhodospirillum rubrum S1H 0.67 Rru_A3190 Aspartate carbamoyltransferase (NCBI) 0.60 Rru_A1050 Phosphoribosylaminoimidazole carboxylase (NCBI)
Magnetospirillum magneticum AMB-1 0.67 AMB_RS18300 aspartate carbamoyltransferase 0.67 AMB_RS11145 5-(carboxyamino)imidazole ribonucleotide mutase
Azospirillum sp. SherDot2 0.67 MPMX19_01054 Aspartate carbamoyltransferase 0.70 MPMX19_01417 N5-carboxyaminoimidazole ribonucleotide mutase
Azospirillum brasilense Sp245 0.66 AZOBR_RS20575 aspartate carbamoyltransferase 0.70 AZOBR_RS06145 N5-carboxyaminoimidazole ribonucleotide mutase
Phaeobacter inhibens DSM 17395 0.65 PGA1_c03060 aspartate carbamoyltransferase PyrB 0.54 PGA1_c24860 phosphoribosylaminoimidazole carboxylase catalytic subunit PurE 0.79 32
Dinoroseobacter shibae DFL-12 0.64 Dshi_3091 aspartate carbamoyltransferase (RefSeq) 0.47 Dshi_0681 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq)
Sphingomonas koreensis DSMZ 15582 0.61 Ga0059261_0076 aspartate carbamoyltransferase (EC 2.1.3.2) 0.63 Ga0059261_1427 phosphoribosylaminoimidazole carboxylase, PurE protein
Caulobacter crescentus NA1000 Δfur 0.61 CCNA_02525 aspartate carbamoyltransferase 0.67 CCNA_03393 phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit low > 67
Caulobacter crescentus NA1000 0.61 CCNA_02525 aspartate carbamoyltransferase 0.67 CCNA_03393 phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit 0.90 9
Brevundimonas sp. GW460-12-10-14-LB2 0.60 A4249_RS04260 aspartate carbamoyltransferase catalytic subunit 0.66 A4249_RS08940 5-(carboxyamino)imidazole ribonucleotide mutase
Ralstonia solanacearum UW163 0.53 UW163_RS00940 aspartate carbamoyltransferase catalytic subunit 0.44 UW163_RS01415 5-(carboxyamino)imidazole ribonucleotide mutase
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS12625 aspartate carbamoyltransferase catalytic subunit 0.44 RALBFv3_RS12195 5-(carboxyamino)imidazole ribonucleotide mutase
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS15860 aspartate carbamoyltransferase catalytic subunit 0.38 RR42_RS03225 N5-carboxyaminoimidazole ribonucleotide mutase
Ralstonia solanacearum PSI07 0.53 RPSI07_RS20635 aspartate carbamoyltransferase catalytic subunit 0.43 RPSI07_RS21135 5-(carboxyamino)imidazole ribonucleotide mutase
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS08625 aspartate carbamoyltransferase catalytic subunit 0.41 ABZR87_RS08085 5-(carboxyamino)imidazole ribonucleotide mutase
Ralstonia solanacearum GMI1000 0.53 RS_RS03410 aspartate carbamoyltransferase 0.44 RS_RS02880 5-(carboxyamino)imidazole ribonucleotide mutase
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS25780 aspartate carbamoyltransferase catalytic subunit 0.42 QEN71_RS02445 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas stutzeri RCH2 0.52 Psest_0291 aspartate carbamoyltransferase 0.54 Psest_4069 phosphoribosylaminoimidazole carboxylase, PurE protein
Paraburkholderia graminis OAS925 0.52 ABIE53_001131 aspartate carbamoyltransferase catalytic subunit 0.42 ABIE53_003424 5-(carboxyamino)imidazole ribonucleotide mutase
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_04817 aspartate carbamoyltransferase 0.42 H281DRAFT_04186 5-(carboxyamino)imidazole ribonucleotide mutase
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS04235 aspartate carbamoyltransferase 0.42 BPHYT_RS16250 N5-carboxyaminoimidazole ribonucleotide mutase low > 109
Pseudomonas sp. S08-1 0.52 OH686_10940 aspartate carbamoyltransferase 0.58 OH686_13375 N5-carboxyaminoimidazole ribonucleotide mutase
Marinobacter adhaerens HP15 0.52 HP15_3507 aspartate carbamoyltransferase 0.58 HP15_2349 phosphoribosylaminoimidazole carboxylase catalytic subunit
Variovorax sp. SCN45 0.51 GFF2160 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.43 GFF5512 N5-carboxyaminoimidazole ribonucleotide mutase (EC 5.4.99.18) low > 127
Dechlorosoma suillum PS 0.51 Dsui_0596 aspartate carbamoyltransferase 0.44 Dsui_0092 phosphoribosylaminoimidazole carboxylase, PurE protein
Pseudomonas simiae WCS417 0.51 PS417_26700 aspartate carbamoyltransferase catalytic subunit 0.56 PS417_28120 N5-carboxyaminoimidazole ribonucleotide mutase
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_08135 aspartate carbamoyltransferase catalytic subunit 0.56 AO353_09940 N5-carboxyaminoimidazole ribonucleotide mutase
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_1016 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.56 PfGW456L13_746 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_13450 aspartate carbamoyltransferase catalytic subunit 0.56 AO356_11080 N5-carboxyaminoimidazole ribonucleotide mutase
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_4606 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.48 Pf6N2E2_4082 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS28345 aspartate carbamoyltransferase 0.56 PFLU_RS29805 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas sp. RS175 0.51 PFR28_04237 Aspartate carbamoyltransferase 0.56 PFR28_04496 N5-carboxyaminoimidazole ribonucleotide mutase
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_0482 aspartate carbamoyltransferase 0.55 Psyr_5048 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas fluorescens SBW25 0.51 PFLU_RS28345 aspartate carbamoyltransferase 0.56 PFLU_RS29805 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_0482 aspartate carbamoyltransferase 0.55 Psyr_5048 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_2347 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.56 Pf1N1B4_2027 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Desulfovibrio vulgaris Hildenborough JW710 0.51 DVU2901 pyrB aspartate carbamoyltransferase (TIGR) 0.34 DVU0487 purE phosphoribosylaminoimidazole carboxylase, catalytic subunit (TIGR)
Variovorax sp. OAS795 0.50 ABID97_RS24660 aspartate carbamoyltransferase catalytic subunit 0.42 ABID97_RS01705 5-(carboxyamino)imidazole ribonucleotide mutase
Pseudomonas putida KT2440 0.50 PP_4998 Aspartate carbamoyltransferase 0.54 PP_5336 N5-carboxyaminoimidazole ribonucleotide mutase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF651 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.37 GFF2771 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS02330 aspartate carbamoyltransferase 0.42 HSERO_RS03365 N5-carboxyaminoimidazole ribonucleotide mutase
Echinicola vietnamensis KMM 6221, DSM 17526 0.49 Echvi_4661 aspartate carbamoyltransferase 0.46 Echvi_0885 phosphoribosylaminoimidazole carboxylase, PurE protein
Pedobacter sp. GW460-11-11-14-LB5 0.48 CA265_RS14660 aspartate carbamoyltransferase 0.47 CA265_RS07740 5-(carboxyamino)imidazole ribonucleotide mutase
Pontibacter actiniarum KMM 6156, DSM 19842 0.47 CA264_20465 aspartate carbamoyltransferase 0.47 CA264_12595 5-(carboxyamino)imidazole ribonucleotide mutase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.47 ABZR88_RS03460 aspartate carbamoyltransferase catalytic subunit 0.47 ABZR88_RS09285 5-(carboxyamino)imidazole ribonucleotide mutase
Desulfovibrio vulgaris Miyazaki F 0.47 DvMF_1425 pyrB aspartate carbamoyltransferase catalytic subunit (RefSeq) 0.35 DvMF_1723 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq) low > 51
Mycobacterium tuberculosis H37Rv 0.46 Rv1380 Probable aspartate carbamoyltransferase PyrB (ATCase) (aspartate transcarbamylase) 0.46 Rv3275c Probable phosphoribosylaminoimidazole carboxylase catalytic subunit PurE (air carboxylase) (AIRC)
Acinetobacter radioresistens SK82 0.46 MPMX26_01099 Aspartate carbamoyltransferase 0.52 MPMX26_03051 N5-carboxyaminoimidazole ribonucleotide mutase low > 36
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_11095 pyrB aspartate carbamoyltransferase catalytic subunit 0.56 OKGIIK_03045 purE Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS10390 aspartate carbamoyltransferase catalytic subunit 0.53 ABZR86_RS09835 5-(carboxyamino)imidazole ribonucleotide mutase
Rhodanobacter denitrificans MT42 0.42 LRK55_RS03990 aspartate carbamoyltransferase catalytic subunit 0.58 LRK55_RS13525 5-(carboxyamino)imidazole ribonucleotide mutase
Rhodanobacter denitrificans FW104-10B01 0.42 LRK54_RS04220 aspartate carbamoyltransferase catalytic subunit 0.58 LRK54_RS13810 5-(carboxyamino)imidazole ribonucleotide mutase
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1722.1 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.42 Xcc-8004.2011.1 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Lysobacter sp. OAE881 0.41 ABIE51_RS16015 aspartate carbamoyltransferase catalytic subunit 0.43 ABIE51_RS15395 5-(carboxyamino)imidazole ribonucleotide mutase
Fusobacterium nucleatum SB010 0.31 HUW76_08765 aspartate carbamoyltransferase catalytic subunit 0.39 HUW76_05160 5-(carboxyamino)imidazole ribonucleotide mutase low > 35
Methanococcus maripaludis JJ 0.24 MMJJ_RS05825 aspartate carbamoyltransferase 0.37 MMJJ_RS03855 5-(carboxyamino)imidazole ribonucleotide mutase
Methanococcus maripaludis S2 0.24 MMP_RS08545 aspartate carbamoyltransferase 0.37 MMP_RS01520 5-(carboxyamino)imidazole ribonucleotide mutase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF930 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.50 GFF4439 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) low > 78
Bifidobacterium breve UCC2003 0.23 BBR_RS15425 aspartate carbamoyltransferase 0.56 BBR_RS13295 5-(carboxyamino)imidazole ribonucleotide mutase
Escherichia coli Nissle 1917 0.23 ECOLIN_RS24625 aspartate carbamoyltransferase 0.51 ECOLIN_RS03030 5-(carboxyamino)imidazole ribonucleotide mutase
Escherichia coli ECRC98 0.23 JDDGAC_15505 pyrB aspartate carbamoyltransferase 0.51 JDDGAC_11485 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli ECRC99 0.23 KEDOAH_16290 pyrB aspartate carbamoyltransferase 0.51 KEDOAH_20135 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli ECOR38 0.23 HEPCGN_10060 pyrB aspartate carbamoyltransferase 0.51 HEPCGN_06475 purE N5-carboxyaminoimidazole ribonucleotide mutase low > 85
Escherichia coli BW25113 0.23 b4245 pyrB aspartate carbamoyltransferase catalytic subunit (NCBI) 0.51 b0523 purE phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) 0.85 13
Escherichia coli BL21 0.23 ECD_04113 aspartate carbamoyltransferase, catalytic subunit 0.51 ECD_00473 N5-carboxyaminoimidazole ribonucleotide mutase 0.82 4
Escherichia coli ECRC62 0.23 BNILDI_07385 pyrB aspartate carbamoyltransferase 0.51 BNILDI_22255 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia fergusonii Becca 0.23 EFB2_04288 Aspartate carbamoyltransferase catalytic subunit 0.51 EFB2_03539 N5-carboxyaminoimidazole ribonucleotide mutase low > 86
Escherichia coli ECRC101 0.23 OKFHMN_11865 pyrB aspartate carbamoyltransferase 0.51 OKFHMN_07835 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli ECOR27 0.23 NOLOHH_04125 pyrB aspartate carbamoyltransferase 0.51 NOLOHH_00825 purE N5-carboxyaminoimidazole ribonucleotide mutase low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_03789 Aspartate carbamoyltransferase catalytic subunit 0.51 OHPLBJKB_03158 N5-carboxyaminoimidazole ribonucleotide mutase low > 73
Escherichia coli ECRC101 0.23 MCAODC_02370 pyrB aspartate carbamoyltransferase 0.51 MCAODC_27055 purE N5-carboxyaminoimidazole ribonucleotide mutase
Escherichia coli ECRC102 0.23 NIAGMN_09715 pyrB aspartate carbamoyltransferase 0.51 NIAGMN_05890 purE N5-carboxyaminoimidazole ribonucleotide mutase
Enterobacter asburiae PDN3 0.22 EX28DRAFT_3446 aspartate carbamoyltransferase (EC 2.1.3.2) 0.49 EX28DRAFT_2459 phosphoribosylaminoimidazole carboxylase, PurE protein
Enterobacter sp. TBS_079 0.22 MPMX20_00544 Aspartate carbamoyltransferase catalytic subunit 0.49 MPMX20_01098 N5-carboxyaminoimidazole ribonucleotide mutase 0.84 32
Klebsiella michiganensis M5al 0.22 BWI76_RS02995 aspartate carbamoyltransferase 0.52 BWI76_RS07070 5-(carboxyamino)imidazole ribonucleotide mutase 0.57 14
Pantoea sp. MT58 0.22 IAI47_16860 aspartate carbamoyltransferase 0.52 IAI47_14350 5-(carboxyamino)imidazole ribonucleotide mutase 0.95 11
Serratia liquefaciens MT49 0.22 IAI46_02275 aspartate carbamoyltransferase 0.49 IAI46_05375 5-(carboxyamino)imidazole ribonucleotide mutase low > 86
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS01350 aspartate carbamoyltransferase 0.45 HMPREF1078_RS05935 5-(carboxyamino)imidazole ribonucleotide mutase
Dickeya dadantii 3937 0.22 DDA3937_RS01925 aspartate carbamoyltransferase 0.51 DDA3937_RS15105 5-(carboxyamino)imidazole ribonucleotide mutase
Erwinia tracheiphila SCR3 0.22 LU632_RS20950 pyrB aspartate carbamoyltransferase 0.52 LU632_RS15245 purE 5-(carboxyamino)imidazole ribonucleotide mutase 0.86 14
Dickeya dianthicola ME23 0.22 DZA65_RS01970 aspartate carbamoyltransferase 0.50 DZA65_RS15990 5-(carboxyamino)imidazole ribonucleotide mutase low > 75
Dickeya dianthicola 67-19 0.21 HGI48_RS01900 aspartate carbamoyltransferase 0.50 HGI48_RS15185 5-(carboxyamino)imidazole ribonucleotide mutase low > 71
Phocaeicola dorei CL03T12C01 0.21 ABI39_RS17400 aspartate carbamoyltransferase 0.41 ABI39_RS04245 5-(carboxyamino)imidazole ribonucleotide mutase
Vibrio cholerae E7946 ATCC 55056 0.21 CSW01_12725 aspartate carbamoyltransferase 0.55 CSW01_00265 5-(carboxyamino)imidazole ribonucleotide mutase low > 62
Pectobacterium carotovorum WPP14 0.21 HER17_RS19510 aspartate carbamoyltransferase 0.51 HER17_RS06475 5-(carboxyamino)imidazole ribonucleotide mutase 0.94 41
Phocaeicola vulgatus CL09T03C04 0.21 HMPREF1058_RS03820 aspartate carbamoyltransferase 0.42 HMPREF1058_RS12490 5-(carboxyamino)imidazole ribonucleotide mutase
Alteromonas macleodii MIT1002 0.21 MIT1002_00423 Aspartate carbamoyltransferase catalytic chain 0.46 MIT1002_00521 N5-carboxyaminoimidazole ribonucleotide mutase 0.90 30
Rahnella sp. WP5 0.21 EX31_RS12785 aspartate carbamoyltransferase 0.49 EX31_RS22625 5-(carboxyamino)imidazole ribonucleotide mutase 0.87 58
Bacteroides stercoris CC31F 0.21 HMPREF1181_RS14990 aspartate carbamoyltransferase 0.43 HMPREF1181_RS00940 5-(carboxyamino)imidazole ribonucleotide mutase 0.85 46
Bacteroides ovatus ATCC 8483 0.21 BACOVA_02450 aspartate carbamoyltransferase 0.43 BACOVA_01613 phosphoribosylaminoimidazole carboxylase, catalytic subunit
Shewanella oneidensis MR-1 0.20 SO1301 pyrB aspartate carbamoyltransferase (NCBI ptt file) 0.54 SO3554 purE phosphoribosylaminoimidazole carboxylase, catalytic subunit (NCBI ptt file) 0.83 20
Kangiella aquimarina DSM 16071 0.20 B158DRAFT_0021 aspartate carbamoyltransferase (EC 2.1.3.2) 0.57 B158DRAFT_0611 5-(carboxyamino)imidazole ribonucleotide mutase
Shewanella sp. ANA-3 0.20 Shewana3_3070 aspartate carbamoyltransferase (RefSeq) 0.55 Shewana3_3155 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq) 0.84 61
Shewanella loihica PV-4 0.20 Shew_1013 aspartate carbamoyltransferase (RefSeq) 0.60 Shew_1248 phosphoribosylaminoimidazole carboxylase, catalytic subunit (RefSeq)
Shewanella amazonensis SB2B 0.19 Sama_0840 aspartate carbamoyltransferase (RefSeq) 0.60 Sama_1064 phosphoribosylaminoimidazole carboxylase (RefSeq) 0.54 45

Not shown: 3 genomes with orthologs for Atu1308 only; 1 genomes with orthologs for Atu3754 only