| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Agrobacterium fabrum C58 | 1.0 | Atu2125 | | ABC transporter, nucleotide binding/ATPase protein | 1.0 | Atu1513 | | ABC excinuclease subunit A | 0.32 | 16 |
| Sinorhizobium meliloti 1021 | 0.87 | SMc04454 | | ABC transporter ATP-binding protein | 0.89 | SMc01235 | | excinuclease ABC subunit A | low | > 103 |
| Rhizobium sp. OAE497 | 0.86 | ABIE40_RS11960 | | energy-dependent translational throttle protein EttA | 0.90 | ABIE40_RS09360 | | excinuclease ABC subunit UvrA | 0.55 | 15 |
| Rhodopseudomonas palustris CGA009 | 0.76 | TX73_018705 | | energy-dependent translational throttle protein EttA | 0.73 | TX73_014580 | | excinuclease ABC subunit UvrA | low | > 86 |
| Dinoroseobacter shibae DFL-12 | 0.74 | Dshi_2197 | | ABC transporter related (RefSeq) | 0.68 | Dshi_1809 | | excinuclease ABC, A subunit (RefSeq) | low | > 64 |
| Bosea sp. OAE506 | 0.74 | ABIE41_RS12400 | | energy-dependent translational throttle protein EttA | 0.72 | ABIE41_RS15100 | | excinuclease ABC subunit UvrA | low | > 77 |
| Phaeobacter inhibens DSM 17395 | 0.69 | PGA1_c26300 | | ABC transporter, ATP-binding protein | 0.67 | PGA1_c17370 | | uvrABC system protein A | low | > 62 |
| Rhodospirillum rubrum S1H | 0.68 | Rru_A1527 | | ABC transporter component (NCBI) | 0.70 | Rru_A1752 | | Excinuclease ABC, A subunit (NCBI) | low | > 58 |
| Magnetospirillum magneticum AMB-1 | 0.67 | AMB_RS04455 | | energy-dependent translational throttle protein EttA | 0.68 | AMB_RS12410 | | excinuclease ABC subunit UvrA | low | > 64 |
| Caulobacter crescentus NA1000 | 0.66 | CCNA_02231 | | ABC transporter ATP-binding protein | 0.70 | CCNA_02673 | | excinuclease ABC subunit A | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.66 | CCNA_02231 | | ABC transporter ATP-binding protein | 0.70 | CCNA_02673 | | excinuclease ABC subunit A | — | — |
| Azospirillum brasilense Sp245 | 0.66 | AZOBR_RS09515 | | heme ABC transporter ATP-binding protein | 0.68 | AZOBR_RS15370 | | excinuclease ABC subunit A | 0.38 | 68 |
| Azospirillum sp. SherDot2 | 0.66 | MPMX19_00626 | | Energy-dependent translational throttle protein EttA | 0.70 | MPMX19_01152 | | UvrABC system protein A | low | > 112 |
| Sphingomonas koreensis DSMZ 15582 | 0.65 | Ga0059261_0048 | | ATP-binding cassette protein, ChvD family | 0.67 | Ga0059261_0674 | | excinuclease ABC, A subunit | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.64 | A4249_RS07905 | | energy-dependent translational throttle protein EttA | 0.70 | A4249_RS08575 | | excinuclease ABC subunit UvrA | — | — |
| Rhodanobacter denitrificans MT42 | 0.59 | LRK55_RS04405 | | energy-dependent translational throttle protein EttA | 0.57 | LRK55_RS14925 | | excinuclease ABC subunit UvrA | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.59 | ABZR88_RS04815 | | energy-dependent translational throttle protein EttA | 0.48 | ABZR88_RS18670 | | excinuclease ABC subunit UvrA | low | > 71 |
| Rhodanobacter denitrificans FW104-10B01 | 0.59 | LRK54_RS04630 | | energy-dependent translational throttle protein EttA | 0.57 | LRK54_RS15210 | | excinuclease ABC subunit UvrA | low | > 59 |
| Ralstonia sp. UNC404CL21Col | 0.59 | ABZR87_RS02310 | | energy-dependent translational throttle protein EttA | 0.58 | ABZR87_RS07120 | | excinuclease ABC subunit UvrA | low | > 80 |
| Dyella japonica UNC79MFTsu3.2 | 0.58 | ABZR86_RS10725 | | energy-dependent translational throttle protein EttA | 0.57 | ABZR86_RS00910 | | excinuclease ABC subunit UvrA | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.58 | DvMF_1058 | | putative ABC transporter ATP-binding protein (RefSeq) | 0.44 | DvMF_3050 | | excinuclease ABC, A subunit (RefSeq) | low | > 51 |
| Rhodanobacter sp. FW510-T8 | 0.58 | OKGIIK_11445 | ettA | energy-dependent translational throttle protein EttA | 0.56 | OKGIIK_03980 | uvrA | excinuclease ABC subunit UvrA | low | > 52 |
| Ralstonia solanacearum UW163 | 0.58 | UW163_RS06985 | | energy-dependent translational throttle protein EttA | 0.58 | UW163_RS02345 | | excinuclease ABC subunit UvrA | — | — |
| Dickeya dadantii 3937 | 0.58 | DDA3937_RS18460 | | energy-dependent translational throttle protein EttA | 0.57 | DDA3937_RS17605 | | excinuclease ABC subunit UvrA | low | > 74 |
| Ralstonia solanacearum IBSBF1503 | 0.58 | RALBFv3_RS06640 | | energy-dependent translational throttle protein EttA | 0.58 | RALBFv3_RS11235 | | excinuclease ABC subunit UvrA | 0.33 | 14 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.58 | Echvi_0034 | | ATP-binding cassette protein, ChvD family | 0.50 | Echvi_1138 | | excinuclease ABC, A subunit | low | > 79 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.58 | CA265_RS14910 | | ABC transporter ATP-binding protein | 0.48 | CA265_RS25080 | | excinuclease ABC subunit A | low | > 88 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.58 | DVU2586 | | ABC transporter, ATP-binding protein (TIGR) | 0.45 | DVU1987 | uvrA | excinuclease ABC, A subunit (TIGR) | low | > 55 |
| Dickeya dianthicola ME23 | 0.57 | DZA65_RS19530 | | energy-dependent translational throttle protein EttA | 0.57 | DZA65_RS18735 | | excinuclease ABC subunit UvrA | low | > 75 |
| Ralstonia solanacearum GMI1000 | 0.57 | RS_RS14590 | | energy-dependent translational throttle protein EttA | 0.58 | RS_RS02080 | | excinuclease ABC subunit UvrA | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.57 | RPSI07_RS10585 | | energy-dependent translational throttle protein EttA | 0.58 | RPSI07_RS22065 | | excinuclease ABC subunit UvrA | low | > 81 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.57 | GFF3531 | | ABC transporter | 0.56 | GFF2755 | | Excinuclease ABC subunit A | low | > 90 |
| Dickeya dianthicola 67-19 | 0.57 | HGI48_RS18390 | | energy-dependent translational throttle protein EttA | 0.57 | HGI48_RS17610 | | excinuclease ABC subunit UvrA | low | > 71 |
| Kangiella aquimarina DSM 16071 | 0.57 | B158DRAFT_0881 | | ATP-binding cassette protein, ChvD family | 0.59 | B158DRAFT_0885 | | excinuclease ABC, A subunit | low | > 40 |
| Paraburkholderia graminis OAS925 | 0.57 | ABIE53_003656 | | sulfate-transporting ATPase | 0.57 | ABIE53_000732 | | excinuclease ABC subunit A | low | > 113 |
| Mycobacterium tuberculosis H37Rv | 0.57 | Rv2477c | | Probable macrolide-transport ATP-binding protein ABC transporter | 0.55 | Rv1638 | | Probable excinuclease ABC (subunit A-DNA-binding ATPase) UvrA | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.57 | QEN71_RS27625 | | energy-dependent translational throttle protein EttA | 0.56 | QEN71_RS01825 | | excinuclease ABC subunit UvrA | low | > 153 |
| Bacteroides stercoris CC31F | 0.57 | HMPREF1181_RS12740 | | energy-dependent translational throttle protein EttA | 0.49 | HMPREF1181_RS15185 | | excinuclease ABC subunit UvrA | 0.56 | 6 |
| Acidovorax sp. GW101-3H11 | 0.57 | Ac3H11_387 | | ABC transporter ATP-binding protein | 0.54 | Ac3H11_4387 | | Excinuclease ABC subunit A | — | — |
| Pseudomonas sp. S08-1 | 0.57 | OH686_16240 | | Energy-dependent translational throttle protein EttA | 0.60 | OH686_15495 | | excinuclease ABC subunit A | low | > 80 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.57 | H281DRAFT_05699 | | sulfate-transporting ATPase | 0.57 | H281DRAFT_01913 | | Excinuclease ABC subunit A | low | > 103 |
| Marinobacter adhaerens HP15 | 0.57 | HP15_488 | | ABC transporter ATP-binding protein-like protein | 0.58 | HP15_406 | | excinuclease ABC, ATPase subunit (A) | 0.65 | 2 |
| Herbaspirillum seropedicae SmR1 | 0.57 | HSERO_RS23550 | | ABC transporter ATP-binding protein | 0.57 | HSERO_RS19810 | | excinuclease ABC subunit A | low | > 78 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.57 | CA264_18150 | | energy-dependent translational throttle protein EttA | 0.50 | CA264_18100 | | ABC-ATPase UvrA | low | > 74 |
| Variovorax sp. SCN45 | 0.57 | GFF6780 | | Energy-dependent translational throttle protein EttA | 0.56 | GFF4944 | | Excinuclease ABC subunit A | low | > 127 |
| Pantoea sp. MT58 | 0.56 | IAI47_16325 | | energy-dependent translational throttle protein EttA | 0.57 | IAI47_17815 | | excinuclease ABC subunit UvrA | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.56 | GFF1059 | | ABC transporter, ATP-binding protein | 0.57 | GFF1429 | | Excinuclease ABC subunit A | low | > 78 |
| Burkholderia phytofirmans PsJN | 0.56 | BPHYT_RS17480 | | ABC transporter ATP-binding protein | 0.57 | BPHYT_RS02970 | | excinuclease ABC subunit A | low | > 109 |
| Cupriavidus basilensis FW507-4G11 | 0.56 | RR42_RS18575 | | ABC transporter ATP-binding protein | 0.57 | RR42_RS02145 | | excinuclease ABC subunit A | low | > 128 |
| Serratia liquefaciens MT49 | 0.56 | IAI46_02965 | | energy-dependent translational throttle protein EttA | 0.57 | IAI46_22905 | | excinuclease ABC subunit UvrA | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.56 | LU632_RS02565 | ettA | energy-dependent translational throttle protein EttA | 0.56 | LU632_RS23685 | uvrA | excinuclease ABC subunit UvrA | low | > 74 |
| Pseudomonas putida KT2440 | 0.56 | PP_0674 | | ADP/ATP ratio sensor and inhibitor of translation | 0.60 | PP_0483 | | excinuclease (uvrABC system protein A) | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.56 | Psyr_4264 | | ABC transporter | 0.60 | Psyr_4520 | | Excinuclease ABC subunit A | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.56 | Psyr_4264 | | ABC transporter | 0.60 | Psyr_4520 | | Excinuclease ABC subunit A | low | > 86 |
| Castellaniella sp019104865 MT123 | 0.56 | ABCV34_RS08155 | | energy-dependent translational throttle protein EttA | 0.52 | ABCV34_RS12715 | | excinuclease ABC subunit UvrA | low | > 48 |
| Escherichia coli ECRC98 | 0.56 | JDDGAC_14770 | ettA | energy-dependent translational throttle protein EttA | 0.56 | JDDGAC_16530 | uvrA | excinuclease ABC subunit UvrA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.56 | OHPLBJKB_03670 | | Energy-dependent translational throttle protein EttA | 0.57 | OHPLBJKB_03983 | | UvrABC system protein A | low | > 73 |
| Escherichia coli ECRC62 | 0.56 | BNILDI_08090 | ettA | energy-dependent translational throttle protein EttA | 0.57 | BNILDI_06380 | uvrA | excinuclease ABC subunit UvrA | — | — |
| Escherichia coli ECRC99 | 0.56 | KEDOAH_16980 | ettA | energy-dependent translational throttle protein EttA | 0.56 | KEDOAH_15255 | uvrA | excinuclease ABC subunit UvrA | — | — |
| Escherichia coli BL21 | 0.56 | ECD_04267 | | energy-dependent translational throttle A | 0.56 | ECD_03930 | | ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC | low | > 60 |
| Escherichia coli BW25113 | 0.56 | b4391 | yjjK | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | 0.57 | b4058 | uvrA | excinuclease ABC subunit A (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.56 | NIAGMN_09025 | ettA | energy-dependent translational throttle protein EttA | 0.56 | NIAGMN_10740 | uvrA | excinuclease ABC subunit UvrA | — | — |
| Escherichia coli ECRC101 | 0.56 | MCAODC_01690 | ettA | energy-dependent translational throttle protein EttA | 0.56 | MCAODC_03405 | uvrA | excinuclease ABC subunit UvrA | — | — |
| Escherichia fergusonii Becca | 0.56 | EFB2_04053 | | Energy-dependent translational throttle protein EttA | 0.56 | EFB2_04533 | | UvrABC system protein A | low | > 86 |
| Escherichia coli ECRC101 | 0.56 | OKFHMN_11175 | ettA | energy-dependent translational throttle protein EttA | 0.56 | OKFHMN_12895 | uvrA | excinuclease ABC subunit UvrA | — | — |
| Escherichia coli Nissle 1917 | 0.56 | ECOLIN_RS25205 | | energy-dependent translational throttle protein EttA | 0.56 | ECOLIN_RS23485 | | excinuclease ABC subunit UvrA | low | > 52 |
| Pseudomonas sp. RS175 | 0.56 | PFR28_03784 | | Energy-dependent translational throttle protein EttA | 0.60 | PFR28_03974 | | UvrABC system protein A | low | > 88 |
| Phocaeicola vulgatus CL09T03C04 | 0.56 | HMPREF1058_RS17820 | | energy-dependent translational throttle protein EttA | 0.49 | HMPREF1058_RS01735 | | excinuclease ABC subunit UvrA | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.56 | ABI39_RS14035 | | energy-dependent translational throttle protein EttA | 0.49 | ABI39_RS15330 | | excinuclease ABC subunit UvrA | low | > 72 |
| Escherichia coli ECOR27 | 0.56 | NOLOHH_03505 | ettA | energy-dependent translational throttle protein EttA | 0.57 | NOLOHH_05145 | uvrA | excinuclease ABC subunit UvrA | low | > 57 |
| Parabacteroides merdae CL09T00C40 | 0.56 | HMPREF1078_RS07420 | | energy-dependent translational throttle protein EttA | 0.49 | HMPREF1078_RS00835 | | excinuclease ABC subunit UvrA | low | > 61 |
| Escherichia coli ECOR38 | 0.56 | HEPCGN_09180 | ettA | energy-dependent translational throttle protein EttA | 0.56 | HEPCGN_11510 | uvrA | excinuclease ABC subunit UvrA | low | > 85 |
| Klebsiella michiganensis M5al | 0.56 | BWI76_RS04175 | | energy-dependent translational throttle protein EttA | 0.57 | BWI76_RS01950 | | excinuclease ABC subunit A | low | > 92 |
| Enterobacter sp. TBS_079 | 0.56 | MPMX20_00698 | | Energy-dependent translational throttle protein EttA | 0.57 | MPMX20_00276 | | UvrABC system protein A | low | > 85 |
| Pectobacterium carotovorum WPP14 | 0.56 | HER17_RS02745 | | energy-dependent translational throttle protein EttA | 0.57 | HER17_RS03550 | | excinuclease ABC subunit UvrA | low | > 75 |
| Dechlorosoma suillum PS | 0.56 | Dsui_2746 | | ATP-binding cassette protein, ChvD family | 0.60 | Dsui_1622 | | excinuclease ABC, A subunit | low | > 51 |
| Enterobacter asburiae PDN3 | 0.56 | EX28DRAFT_3601 | | ATP-binding cassette protein, ChvD family | 0.57 | EX28DRAFT_4246 | | excinuclease ABC, A subunit | low | > 76 |
| Pseudomonas fluorescens FW300-N2C3 | 0.56 | AO356_15735 | | ABC transporter ATP-binding protein | 0.59 | AO356_14785 | | ABC-ATPase UvrA | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.56 | Pf6N2E2_5084 | | Glutathione-regulated potassium-efflux system ATP-binding protein | 0.59 | Pf6N2E2_4888 | | Excinuclease ABC subunit A | low | > 103 |
| Bacteroides ovatus ATCC 8483 | 0.56 | BACOVA_03986 | | ATP-binding cassette protein, ChvD family | 0.50 | BACOVA_03703 | | excinuclease ABC, A subunit | low | > 94 |
| Pseudomonas stutzeri RCH2 | 0.56 | Psest_3433 | | ATP-binding cassette protein, ChvD family | 0.60 | Psest_3576 | | excinuclease ABC, A subunit | low | > 67 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.56 | BT1186 | | ABC transporter ATP-binding protein (NCBI ptt file) | 0.50 | BT0578 | | excinuclease ABC subunit A (NCBI ptt file) | low | > 81 |
| Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_1453 | | Glutathione-regulated potassium-efflux system ATP-binding protein | 0.59 | PfGW456L13_1283 | | Excinuclease ABC subunit A | low | > 87 |
| Alteromonas macleodii MIT1002 | 0.55 | MIT1002_02704 | | putative ABC transporter ATP-binding protein | 0.57 | MIT1002_00179 | | Excinuclease ABC subunit A | low | > 70 |
| Vibrio cholerae E7946 ATCC 55056 | 0.55 | CSW01_03650 | | energy-dependent translational throttle protein EttA | 0.56 | CSW01_02080 | | UvrABC system protein A | low | > 62 |
| Pseudomonas fluorescens FW300-N2E3 | 0.55 | AO353_14030 | | ABC transporter ATP-binding protein | 0.60 | AO353_06855 | | ABC-ATPase UvrA | low | > 101 |
| Pseudomonas simiae WCS417 | 0.55 | PS417_24265 | | ABC transporter ATP-binding protein | 0.60 | PS417_25395 | | excinuclease ABC subunit A | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.55 | PFLU_RS26180 | | energy-dependent translational throttle protein EttA | 0.60 | PFLU_RS27025 | | excinuclease ABC subunit UvrA | 0.59 | 66 |
| Pseudomonas fluorescens SBW25-INTG | 0.55 | PFLU_RS26180 | | energy-dependent translational throttle protein EttA | 0.60 | PFLU_RS27025 | | excinuclease ABC subunit UvrA | low | > 109 |
| Shewanella amazonensis SB2B | 0.55 | Sama_1013 | | putative ABC transporter ATP-binding protein (RefSeq) | 0.54 | Sama_0514 | | excinuclease ABC, A subunit (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.55 | SO3472 | | ABC transporter, ATP-binding protein (NCBI ptt file) | 0.56 | SO4030 | uvrA | excinuclease ABC, A subunit (NCBI ptt file) | low | > 76 |
| Rahnella sp. WP5 | 0.55 | EX31_RS04000 | | energy-dependent translational throttle protein EttA | 0.57 | EX31_RS11990 | | excinuclease ABC subunit UvrA | low | > 89 |
| Shewanella loihica PV-4 | 0.55 | Shew_1183 | | putative ABC transporter ATP-binding protein (RefSeq) | 0.55 | Shew_0533 | | excinuclease ABC, A subunit (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.55 | Shewana3_1093 | | putative ABC transporter ATP-binding protein (RefSeq) | 0.56 | Shewana3_3592 | | excinuclease ABC subunit A (RefSeq) | low | > 73 |
| Acinetobacter radioresistens SK82 | 0.54 | MPMX26_02832 | | Energy-dependent translational throttle protein EttA | 0.57 | MPMX26_02892 | | UvrABC system protein A | low | > 36 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.53 | Xcc-8004.4400.1 | | ABC transporter, ATP-binding protein | 0.57 | Xcc-8004.3830.1 | | Excinuclease ABC subunit A | — | — |
| Bifidobacterium breve UCC2003 | 0.51 | BBR_RS18150 | | energy-dependent translational throttle protein EttA | 0.54 | BBR_RS15510 | | excinuclease ABC subunit UvrA | — | — |
| Synechococcus elongatus PCC 7942 | 0.30 | Synpcc7942_1381 | | ATPase | 0.53 | Synpcc7942_0848 | uvrA | excinuclease ABC subunit A | low | > 38 |
Not shown: 1 genomes with orthologs for Atu2125 only; 5 genomes with orthologs for Atu1513 only