Conservation of cofitness between Atu1308 and Atu1075 in Agrobacterium fabrum C58

94 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1308 aspartate carbamoyl transferase catalytic subunit 1.0 Atu1075 amidophosphoribosyltransferase 0.91 5
Sinorhizobium meliloti 1021 0.91 SMc01360 aspartate carbamoyltransferase catalytic subunit 0.84 SMc00554 amidophosphoribosyltransferase 0.87 5
Rhizobium sp. OAE497 0.89 ABIE40_RS07385 aspartate carbamoyltransferase catalytic subunit 0.87 ABIE40_RS06270 amidophosphoribosyltransferase — —
Bosea sp. OAE506 0.75 ABIE41_RS17230 aspartate carbamoyltransferase catalytic subunit 0.65 ABIE41_RS17810 amidophosphoribosyltransferase 0.50 38
Rhodopseudomonas palustris CGA009 0.68 TX73_016120 aspartate carbamoyltransferase catalytic subunit 0.61 TX73_015990 amidophosphoribosyltransferase — —
Rhodospirillum rubrum S1H 0.67 Rru_A3190 Aspartate carbamoyltransferase (NCBI) 0.56 Rru_A0404 Amidophosphoribosyl transferase (NCBI) low > 58
Magnetospirillum magneticum AMB-1 0.67 AMB_RS18300 aspartate carbamoyltransferase 0.55 AMB_RS10545 amidophosphoribosyltransferase — —
Azospirillum sp. SherDot2 0.67 MPMX19_01054 Aspartate carbamoyltransferase 0.57 MPMX19_00906 Amidophosphoribosyltransferase 0.90 4
Azospirillum brasilense Sp245 0.66 AZOBR_RS20575 aspartate carbamoyltransferase 0.57 AZOBR_RS08310 amidophosphoribosyltransferase 0.59 19
Phaeobacter inhibens DSM 17395 0.65 PGA1_c03060 aspartate carbamoyltransferase PyrB 0.51 PGA1_c10810 amidophosphoribosyltransferase PurF 0.87 12
Dinoroseobacter shibae DFL-12 0.64 Dshi_3091 aspartate carbamoyltransferase (RefSeq) 0.50 Dshi_2132 amidophosphoribosyltransferase (RefSeq) 0.82 9
Sphingomonas koreensis DSMZ 15582 0.61 Ga0059261_0076 aspartate carbamoyltransferase (EC 2.1.3.2) 0.55 Ga0059261_3626 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Caulobacter crescentus NA1000 0.61 CCNA_02525 aspartate carbamoyltransferase 0.62 CCNA_01730 amidophosphoribosyltransferase 0.88 15
Caulobacter crescentus NA1000 Δfur 0.61 CCNA_02525 aspartate carbamoyltransferase 0.62 CCNA_01730 amidophosphoribosyltransferase low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.60 A4249_RS04260 aspartate carbamoyltransferase catalytic subunit 0.56 A4249_RS03735 amidophosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS12625 aspartate carbamoyltransferase catalytic subunit 0.27 RALBFv3_RS02550 amidophosphoribosyltransferase — —
Ralstonia solanacearum UW163 0.53 UW163_RS00940 aspartate carbamoyltransferase catalytic subunit 0.27 UW163_RS11175 amidophosphoribosyltransferase — —
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS15860 aspartate carbamoyltransferase catalytic subunit 0.26 RR42_RS14325 amidophosphoribosyltransferase — —
Ralstonia solanacearum PSI07 0.53 RPSI07_RS20635 aspartate carbamoyltransferase catalytic subunit 0.28 RPSI07_RS14765 amidophosphoribosyltransferase — —
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS08625 aspartate carbamoyltransferase catalytic subunit 0.26 ABZR87_RS14465 amidophosphoribosyltransferase — —
Ralstonia solanacearum GMI1000 0.53 RS_RS03410 aspartate carbamoyltransferase 0.28 RS_RS09930 amidophosphoribosyltransferase — —
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS25780 aspartate carbamoyltransferase catalytic subunit 0.26 QEN71_RS17680 amidophosphoribosyltransferase low > 153
Pseudomonas stutzeri RCH2 0.52 Psest_0291 aspartate carbamoyltransferase 0.27 Psest_2579 amidophosphoribosyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_04817 aspartate carbamoyltransferase 0.27 H281DRAFT_06060 amidophosphoribosyltransferase low > 103
Paraburkholderia graminis OAS925 0.52 ABIE53_001131 aspartate carbamoyltransferase catalytic subunit 0.27 ABIE53_004816 amidophosphoribosyltransferase — —
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS04235 aspartate carbamoyltransferase 0.27 BPHYT_RS33840 amidophosphoribosyltransferase 0.27 34
Pseudomonas sp. S08-1 0.52 OH686_10940 aspartate carbamoyltransferase 0.27 OH686_04420 amidophosphoribosyltransferase — —
Marinobacter adhaerens HP15 0.52 HP15_3507 aspartate carbamoyltransferase 0.27 HP15_1821 amidophosphoribosyltransferase — —
Dechlorosoma suillum PS 0.51 Dsui_0596 aspartate carbamoyltransferase 0.29 Dsui_3186 amidophosphoribosyltransferase — —
Acidovorax sp. GW101-3H11 0.51 Ac3H11_3978 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.27 Ac3H11_2608 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Variovorax sp. SCN45 0.51 GFF2160 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.26 GFF3089 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 127
Pseudomonas simiae WCS417 0.51 PS417_26700 aspartate carbamoyltransferase catalytic subunit 0.27 PS417_18535 amidophosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_08135 aspartate carbamoyltransferase catalytic subunit 0.27 AO353_20690 amidophosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.51 Pf6N2E2_4606 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.26 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_1016 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.26 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_13450 aspartate carbamoyltransferase catalytic subunit 0.26 AO356_21465 amidophosphoribosyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS28345 aspartate carbamoyltransferase 0.27 PFLU_RS20515 amidophosphoribosyltransferase — —
Pseudomonas fluorescens SBW25 0.51 PFLU_RS28345 aspartate carbamoyltransferase 0.27 PFLU_RS20515 amidophosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_0482 aspartate carbamoyltransferase 0.27 Psyr_1668 amidophosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_0482 aspartate carbamoyltransferase 0.27 Psyr_1668 amidophosphoribosyltransferase — —
Pseudomonas sp. RS175 0.51 PFR28_04237 Aspartate carbamoyltransferase 0.26 PFR28_02811 Amidophosphoribosyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.51 DVU2901 pyrB aspartate carbamoyltransferase (TIGR) 0.41 DVU0161 purF amidophosphoribosyltransferase (TIGR) — —
Variovorax sp. OAS795 0.50 ABID97_RS24660 aspartate carbamoyltransferase catalytic subunit 0.26 ABID97_RS21635 amidophosphoribosyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF651 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.27 GFF300 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas putida KT2440 0.50 PP_4998 Aspartate carbamoyltransferase 0.27 PP_2000 amidophosphoribosyl transferase — —
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS02330 aspartate carbamoyltransferase 0.26 HSERO_RS16445 amidophosphoribosyltransferase — —
Desulfovibrio vulgaris Miyazaki F 0.47 DvMF_1425 pyrB aspartate carbamoyltransferase catalytic subunit (RefSeq) 0.41 DvMF_2307 amidophosphoribosyltransferase (RefSeq) 0.86 7
Mycobacterium tuberculosis H37Rv 0.46 Rv1380 Probable aspartate carbamoyltransferase PyrB (ATCase) (aspartate transcarbamylase) 0.36 Rv0808 Amidophosphoribosyltransferase PurF (glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (gpatase) — —
Acinetobacter radioresistens SK82 0.46 MPMX26_01099 Aspartate carbamoyltransferase 0.26 MPMX26_01122 Amidophosphoribosyltransferase low > 36
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_11095 pyrB aspartate carbamoyltransferase catalytic subunit 0.27 OKGIIK_05570 purF amidophosphoribosyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS10390 aspartate carbamoyltransferase catalytic subunit 0.28 ABZR86_RS06775 amidophosphoribosyltransferase — —
Rhodanobacter denitrificans MT42 0.42 LRK55_RS03990 aspartate carbamoyltransferase catalytic subunit 0.27 LRK55_RS01105 amidophosphoribosyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.42 LRK54_RS04220 aspartate carbamoyltransferase catalytic subunit 0.27 LRK54_RS01340 amidophosphoribosyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1722.1 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.27 Xcc-8004.4073.1 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Lysobacter sp. OAE881 0.41 ABIE51_RS16015 aspartate carbamoyltransferase catalytic subunit 0.28 ABIE51_RS06180 amidophosphoribosyltransferase 0.63 9
Synechococcus elongatus PCC 7942 0.41 Synpcc7942_0670 pyrB aspartate carbamoyltransferase catalytic subunit 0.36 Synpcc7942_0004 purF amidophosphoribosyltransferase — —
Fusobacterium nucleatum SB010 0.31 HUW76_08765 aspartate carbamoyltransferase catalytic subunit 0.32 HUW76_05170 amidophosphoribosyltransferase low > 35
Methanococcus maripaludis S2 0.24 MMP_RS08545 aspartate carbamoyltransferase 0.34 MMP_RS05915 amidophosphoribosyltransferase — —
Methanococcus maripaludis JJ 0.24 MMJJ_RS05825 aspartate carbamoyltransferase 0.35 MMJJ_RS08440 amidophosphoribosyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF930 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.30 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 78
Bifidobacterium breve UCC2003 0.23 BBR_RS15425 aspartate carbamoyltransferase 0.42 BBR_RS13380 amidophosphoribosyltransferase low > 34
Escherichia coli ECRC62 0.23 BNILDI_07385 pyrB aspartate carbamoyltransferase 0.29 BNILDI_13255 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC98 0.23 JDDGAC_15505 pyrB aspartate carbamoyltransferase 0.30 JDDGAC_26675 purF amidophosphoribosyltransferase — —
Escherichia coli ECOR38 0.23 HEPCGN_10060 pyrB aspartate carbamoyltransferase 0.30 HEPCGN_21910 purF amidophosphoribosyltransferase low > 85
Escherichia fergusonii Becca 0.23 EFB2_04288 Aspartate carbamoyltransferase catalytic subunit 0.30 EFB2_01546 Amidophosphoribosyltransferase low > 86
Escherichia coli ECRC101 0.23 OKFHMN_11865 pyrB aspartate carbamoyltransferase 0.30 OKFHMN_22715 purF amidophosphoribosyltransferase — —
Escherichia coli ECOR27 0.23 NOLOHH_04125 pyrB aspartate carbamoyltransferase 0.29 NOLOHH_14335 purF amidophosphoribosyltransferase low > 57
Escherichia coli BW25113 0.23 b4245 pyrB aspartate carbamoyltransferase catalytic subunit (NCBI) 0.29 b2312 purF amidophosphoribosyltransferase (NCBI) 0.86 12
Escherichia coli ECRC99 0.23 KEDOAH_16290 pyrB aspartate carbamoyltransferase 0.30 KEDOAH_05480 purF amidophosphoribosyltransferase — —
Escherichia coli Nissle 1917 0.23 ECOLIN_RS24625 aspartate carbamoyltransferase 0.30 ECOLIN_RS13405 amidophosphoribosyltransferase — —
Escherichia coli ECRC102 0.23 NIAGMN_09715 pyrB aspartate carbamoyltransferase 0.30 NIAGMN_20485 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC101 0.23 MCAODC_02370 pyrB aspartate carbamoyltransferase 0.30 MCAODC_13755 purF amidophosphoribosyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_03789 Aspartate carbamoyltransferase catalytic subunit 0.30 OHPLBJKB_01393 Amidophosphoribosyltransferase low > 73
Escherichia coli BL21 0.23 ECD_04113 aspartate carbamoyltransferase, catalytic subunit 0.29 ECD_02237 amidophosphoribosyltransferase 0.69 15
Enterobacter asburiae PDN3 0.22 EX28DRAFT_3446 aspartate carbamoyltransferase (EC 2.1.3.2) 0.29 EX28DRAFT_0292 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Enterobacter sp. TBS_079 0.22 MPMX20_00544 Aspartate carbamoyltransferase catalytic subunit 0.30 MPMX20_03247 Amidophosphoribosyltransferase 0.85 23
Klebsiella michiganensis M5al 0.22 BWI76_RS02995 aspartate carbamoyltransferase 0.30 BWI76_RS20350 amidophosphoribosyltransferase 0.57 12
Pantoea sp. MT58 0.22 IAI47_16860 aspartate carbamoyltransferase 0.29 IAI47_06275 amidophosphoribosyltransferase 0.97 7
Serratia liquefaciens MT49 0.22 IAI46_02275 aspartate carbamoyltransferase 0.29 IAI46_17810 amidophosphoribosyltransferase low > 86
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS01350 aspartate carbamoyltransferase 0.15 HMPREF1078_RS10430 amidophosphoribosyltransferase — —
Dickeya dadantii 3937 0.22 DDA3937_RS01925 aspartate carbamoyltransferase 0.30 DDA3937_RS14435 amidophosphoribosyltransferase 0.91 2
Erwinia tracheiphila SCR3 0.22 LU632_RS20950 pyrB aspartate carbamoyltransferase 0.29 LU632_RS07865 purF amidophosphoribosyltransferase 0.95 4
Dickeya dianthicola ME23 0.22 DZA65_RS01970 aspartate carbamoyltransferase 0.29 DZA65_RS15335 amidophosphoribosyltransferase 0.60 71
Pectobacterium carotovorum WPP14 0.21 HER17_RS19510 aspartate carbamoyltransferase 0.29 HER17_RS07020 amidophosphoribosyltransferase 0.96 26
Phocaeicola dorei CL03T12C01 0.21 ABI39_RS17400 aspartate carbamoyltransferase 0.15 ABI39_RS18960 amidophosphoribosyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.21 CSW01_12725 aspartate carbamoyltransferase 0.29 CSW01_05115 amidophosphoribosyltransferase low > 62
Dickeya dianthicola 67-19 0.21 HGI48_RS01900 aspartate carbamoyltransferase 0.29 HGI48_RS14405 amidophosphoribosyltransferase 0.74 23
Phocaeicola vulgatus CL09T03C04 0.21 HMPREF1058_RS03820 aspartate carbamoyltransferase 0.15 HMPREF1058_RS04675 amidophosphoribosyltransferase — —
Alteromonas macleodii MIT1002 0.21 MIT1002_00423 Aspartate carbamoyltransferase catalytic chain 0.29 MIT1002_02524 Amidophosphoribosyltransferase 0.82 57
Rahnella sp. WP5 0.21 EX31_RS12785 aspartate carbamoyltransferase 0.28 EX31_RS19570 amidophosphoribosyltransferase 0.89 47
Shewanella oneidensis MR-1 0.20 SO1301 pyrB aspartate carbamoyltransferase (NCBI ptt file) 0.30 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) 0.83 21
Shewanella sp. ANA-3 0.20 Shewana3_3070 aspartate carbamoyltransferase (RefSeq) 0.30 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) 0.85 49
Kangiella aquimarina DSM 16071 0.20 B158DRAFT_0021 aspartate carbamoyltransferase (EC 2.1.3.2) 0.27 B158DRAFT_1488 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Shewanella loihica PV-4 0.20 Shew_1013 aspartate carbamoyltransferase (RefSeq) 0.31 Shew_2302 amidophosphoribosyltransferase (RefSeq) 0.87 15
Shewanella amazonensis SB2B 0.19 Sama_0840 aspartate carbamoyltransferase (RefSeq) 0.30 Sama_2146 amidophosphoribosyltransferase (RefSeq) 0.59 15

Not shown: 8 genomes with orthologs for Atu1308 only; 1 genomes with orthologs for Atu1075 only