Conservation of cofitness between Dshi_2728 and Dshi_1889 in Dinoroseobacter shibae DFL-12

93 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dinoroseobacter shibae DFL-12 1.0 Dshi_2728 phosphoribosylamine--glycine ligase (RefSeq) 1.0 Dshi_1889 phosphoribosylformylglycinamidine cyclo-ligase (RefSeq) 0.94 2
Phaeobacter inhibens DSM 17395 0.76 PGA1_c23610 phosphoribosylamine--glycine ligase PurD 0.74 PGA1_c13260 phosphoribosylformylglycinamidine cyclo-ligase PurM 0.92 2
Rhodopseudomonas palustris CGA009 0.61 TX73_005965 phosphoribosylamine--glycine ligase 0.59 TX73_015785 phosphoribosylformylglycinamidine cyclo-ligase — —
Agrobacterium fabrum C58 0.60 Atu0647 phosphoribosylamine--glycine ligase 0.62 Atu1141 Phosphoribosylglycinamide synthetase 0.96 2
Rhizobium sp. OAE497 0.57 ABIE40_RS05430 phosphoribosylamine--glycine ligase 0.64 ABIE40_RS06560 phosphoribosylformylglycinamidine cyclo-ligase 0.90 24
Magnetospirillum magneticum AMB-1 0.57 AMB_RS01075 phosphoribosylamine--glycine ligase 0.59 AMB_RS14330 phosphoribosylformylglycinamidine cyclo-ligase — —
Bosea sp. OAE506 0.56 ABIE41_RS23160 phosphoribosylamine--glycine ligase 0.58 ABIE41_RS17040 phosphoribosylformylglycinamidine cyclo-ligase 0.88 1
Azospirillum brasilense Sp245 0.56 AZOBR_RS04470 phosphoribosylamine--glycine ligase 0.63 AZOBR_RS16290 phosphoribosylaminoimidazole synthetase — —
Azospirillum sp. SherDot2 0.55 MPMX19_01630 Phosphoribosylamine--glycine ligase 0.61 MPMX19_01304 Phosphoribosylformylglycinamidine cyclo-ligase 0.89 2
Sinorhizobium meliloti 1021 0.54 SMc00993 phosphoribosylamine--glycine ligase 0.59 SMc00615 phosphoribosylaminoimidazole synthetase 0.98 2
Rhodospirillum rubrum S1H 0.51 Rru_A0646 Phosphoribosylamine--glycine ligase (NCBI) 0.59 Rru_A2167 Phosphoribosylformylglycinamidine cyclo-ligase (NCBI) — —
Serratia liquefaciens MT49 0.51 IAI46_01360 phosphoribosylamine--glycine ligase 0.51 IAI46_18885 phosphoribosylformylglycinamidine cyclo-ligase 0.58 15
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_01415 phosphoribosylamine--glycine ligase 0.51 CSW01_11350 phosphoribosylformylglycinamidine cyclo-ligase 0.45 53
Marinobacter adhaerens HP15 0.51 HP15_3228 phosphoribosylamine-glycine ligase 0.50 HP15_1299 phosphoribosylaminoimidazole synthetase — —
Escherichia coli ECOR38 0.50 HEPCGN_11955 purD Phosphoribosylamine--glycine ligase 0.50 HEPCGN_20975 purM Phosphoribosylformylglycinamidine cyclo-ligase low > 85
Pantoea sp. MT58 0.50 IAI47_18045 phosphoribosylamine--glycine ligase 0.51 IAI47_05180 phosphoribosylformylglycinamidine cyclo-ligase 0.98 2
Erwinia tracheiphila SCR3 0.50 LU632_RS01015 purD phosphoribosylamine--glycine ligase 0.50 LU632_RS08275 purM phosphoribosylformylglycinamidine cyclo-ligase 0.95 2
Escherichia coli ECRC102 0.50 NIAGMN_11065 purD Phosphoribosylamine--glycine ligase 0.49 NIAGMN_19580 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli ECRC98 0.50 JDDGAC_16940 purD Phosphoribosylamine--glycine ligase 0.49 JDDGAC_25755 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli ECRC99 0.50 KEDOAH_14845 purD Phosphoribosylamine--glycine ligase 0.49 KEDOAH_06410 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli ECRC101 0.50 OKFHMN_13315 purD Phosphoribosylamine--glycine ligase 0.49 OKFHMN_21810 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli ECRC101 0.50 MCAODC_03815 purD Phosphoribosylamine--glycine ligase 0.49 MCAODC_12340 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli BL21 0.50 ECD_03882 phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase 0.50 ECD_02391 phosphoribosylaminoimidazole synthetase 0.85 3
Escherichia coli ECRC62 0.50 BNILDI_06060 purD Phosphoribosylamine--glycine ligase 0.50 BNILDI_12270 purM Phosphoribosylformylglycinamidine cyclo-ligase — —
Escherichia coli ECOR27 0.50 NOLOHH_05460 purD Phosphoribosylamine--glycine ligase 0.50 NOLOHH_13460 purM Phosphoribosylformylglycinamidine cyclo-ligase low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_04044 Phosphoribosylamine--glycine ligase 0.50 OHPLBJKB_01227 Phosphoribosylformylglycinamidine cyclo-ligase low > 73
Escherichia fergusonii Becca 0.50 EFB2_04605 Phosphoribosylamine--glycine ligase 0.50 EFB2_01399 Phosphoribosylformylglycinamidine cyclo-ligase low > 86
Escherichia coli Nissle 1917 0.50 ECOLIN_RS23095 phosphoribosylamine--glycine ligase 0.50 ECOLIN_RS14190 phosphoribosylformylglycinamidine cyclo-ligase low > 52
Klebsiella michiganensis M5al 0.50 BWI76_RS01610 phosphoribosylamine--glycine ligase 0.51 BWI76_RS20965 phosphoribosylformylglycinamidine cyclo-ligase 0.88 7
Caulobacter crescentus NA1000 0.50 CCNA_00299 phosphoribosylamine--glycine ligase 0.60 CCNA_01775 phosphoribosylformylglycinamidine cyclo-ligase 0.96 1
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_00299 phosphoribosylamine--glycine ligase 0.60 CCNA_01775 phosphoribosylformylglycinamidine cyclo-ligase low > 67
Escherichia coli BW25113 0.50 b4005 purD phosphoribosylamine--glycine ligase (NCBI) 0.50 b2499 purM phosphoribosylaminoimidazole synthetase (NCBI) 0.97 4
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF4187 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.51 GFF2169 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.53 28
Enterobacter sp. TBS_079 0.50 MPMX20_00225 Phosphoribosylamine--glycine ligase 0.51 MPMX20_03354 Phosphoribosylformylglycinamidine cyclo-ligase 0.97 3
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_0167 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.56 B158DRAFT_2385 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Enterobacter asburiae PDN3 0.50 EX28DRAFT_4544 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.51 EX28DRAFT_0168 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Rahnella sp. WP5 0.49 EX31_RS16855 phosphoribosylamine--glycine ligase 0.51 EX31_RS22695 phosphoribosylformylglycinamidine cyclo-ligase 0.97 4
Brevundimonas sp. GW460-12-10-14-LB2 0.49 A4249_RS09255 phosphoribosylamine--glycine ligase 0.60 A4249_RS08210 phosphoribosylformylglycinamidine cyclo-ligase — —
Acinetobacter radioresistens SK82 0.49 MPMX26_01140 Phosphoribosylamine--glycine ligase 0.51 MPMX26_02206 Phosphoribosylformylglycinamidine cyclo-ligase 0.98 2
Pectobacterium carotovorum WPP14 0.49 HER17_RS20340 phosphoribosylamine--glycine ligase 0.52 HER17_RS15465 phosphoribosylformylglycinamidine cyclo-ligase 0.96 5
Desulfovibrio vulgaris Miyazaki F 0.49 DvMF_1722 phosphoribosylamine--glycine ligase (RefSeq) 0.48 DvMF_0202 phosphoribosylaminoimidazole synthetase (RefSeq) — —
Sphingomonas koreensis DSMZ 15582 0.49 Ga0059261_1441 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.54 Ga0059261_0228 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Dickeya dianthicola 67-19 0.49 HGI48_RS01210 phosphoribosylamine--glycine ligase 0.51 HGI48_RS06070 phosphoribosylformylglycinamidine cyclo-ligase 0.87 4
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF4524 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.52 GFF3433 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Dickeya dadantii 3937 0.49 DDA3937_RS01215 phosphoribosylamine--glycine ligase 0.51 DDA3937_RS06025 phosphoribosylformylglycinamidine cyclo-ligase 0.92 5
Castellaniella sp019104865 MT123 0.48 ABCV34_RS02550 phosphoribosylamine--glycine ligase 0.52 ABCV34_RS08795 phosphoribosylformylglycinamidine cyclo-ligase — —
Dickeya dianthicola ME23 0.48 DZA65_RS01255 phosphoribosylamine--glycine ligase 0.51 DZA65_RS06420 phosphoribosylformylglycinamidine cyclo-ligase 0.95 3
Pseudomonas sp. RS175 0.48 PFR28_05213 Phosphoribosylamine--glycine ligase 0.51 PFR28_03217 Phosphoribosylformylglycinamidine cyclo-ligase — —
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS15410 phosphoribosylamine--glycine ligase 0.50 ABZR87_RS00915 phosphoribosylformylglycinamidine cyclo-ligase — —
Desulfovibrio vulgaris Hildenborough JW710 0.48 DVU0488 purD phosphoribosylamine--glycine ligase (TIGR) 0.47 DVU1406 purM phosphoribosylformylglycinamidine cyclo-ligase (TIGR) — —
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_3520 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.52 Pf6N2E2_5729 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Pseudomonas putida KT2440 0.48 PP_4823 Phosphoribosylamine--glycine ligase 0.51 PP_1665 Phosphoribosylformylglycinamidine cyclo-ligase — —
Ralstonia solanacearum PSI07 0.48 RPSI07_RS13680 phosphoribosylamine--glycine ligase 0.49 RPSI07_RS12020 phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas stutzeri RCH2 0.48 Psest_1013 phosphoribosylamine--glycine ligase 0.51 Psest_1474 phosphoribosylaminoimidazole synthetase 0.91 2
Xanthomonas campestris pv. campestris strain 8004 0.48 Xcc-8004.657.1 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.49 Xcc-8004.1676.1 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.92 3
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_4407 phosphoribosylamine--glycine ligase 0.51 Psyr_3689 phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_4407 phosphoribosylamine--glycine ligase 0.51 Psyr_3689 phosphoribosylformylglycinamidine cyclo-ligase — —
Variovorax sp. SCN45 0.47 GFF302 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.52 GFF3941 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.91 4
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_08230 phosphoribosylamine--glycine ligase 0.51 AO356_19090 phosphoribosylaminoimidazole synthetase — —
Pseudomonas sp. S08-1 0.47 OH686_07625 Phosphoribosylamine--glycine ligase 0.49 OH686_18995 Phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_58 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.51 PfGW456L13_4252 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Ralstonia solanacearum GMI1000 0.47 RS_RS10995 phosphoribosylamine--glycine ligase 0.49 RS_RS13145 phosphoribosylformylglycinamidine cyclo-ligase — —
Shewanella amazonensis SB2B 0.47 Sama_0394 phosphoribosylamine--glycine ligase (RefSeq) 0.51 Sama_2097 phosphoribosylaminoimidazole synthetase (RefSeq) 0.98 2
Alteromonas macleodii MIT1002 0.47 MIT1002_03961 Phosphoribosylamine--glycine ligase 0.49 MIT1002_02219 Phosphoribosylformylglycinamidine cyclo-ligase 0.99 9
Paraburkholderia graminis OAS925 0.47 ABIE53_001545 phosphoribosylamine--glycine ligase 0.50 ABIE53_000874 phosphoribosylformylglycinamidine cyclo-ligase — —
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_04521 phosphoribosylamine--glycine ligase 0.50 H281DRAFT_04710 phosphoribosylformylglycinamidine cyclo-ligase — —
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_1316 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.51 Pf1N1B4_3698 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_13645 phosphoribosylamine--glycine ligase 0.51 AO353_02680 phosphoribosylaminoimidazole synthetase — —
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS06405 phosphoribosylamine--glycine ligase 0.51 BPHYT_RS03640 phosphoribosylformylglycinamidine cyclo-ligase 0.82 15
Acidovorax sp. GW101-3H11 0.47 Ac3H11_2421 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.51 Ac3H11_1318 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) — —
Dechlorosoma suillum PS 0.47 Dsui_1596 phosphoribosylamine--glycine ligase 0.54 Dsui_1519 phosphoribosylaminoimidazole synthetase — —
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.52 PFLU_RS22065 phosphoribosylformylglycinamidine cyclo-ligase — —
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS24400 phosphoribosylamine--glycine ligase 0.52 QEN71_RS26445 phosphoribosylformylglycinamidine cyclo-ligase 0.95 1
Pseudomonas fluorescens SBW25 0.46 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.52 PFLU_RS22065 phosphoribosylformylglycinamidine cyclo-ligase — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS03545 phosphoribosylamine--glycine ligase 0.49 RALBFv3_RS05280 phosphoribosylformylglycinamidine cyclo-ligase — —
Ralstonia solanacearum UW163 0.46 UW163_RS10125 phosphoribosylamine--glycine ligase 0.49 UW163_RS08345 phosphoribosylformylglycinamidine cyclo-ligase — —
Variovorax sp. OAS795 0.46 ABID97_RS16735 phosphoribosylamine--glycine ligase 0.52 ABID97_RS08700 phosphoribosylformylglycinamidine cyclo-ligase — —
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS17755 phosphoribosylamine--glycine ligase 0.49 HSERO_RS03165 phosphoribosylaminoimidazole synthetase — —
Shewanella loihica PV-4 0.46 Shew_3413 phosphoribosylamine--glycine ligase (RefSeq) 0.51 Shew_1513 phosphoribosylaminoimidazole synthetase (RefSeq) — —
Lysobacter sp. OAE881 0.45 ABIE51_RS17770 phosphoribosylamine--glycine ligase 0.48 ABIE51_RS15890 phosphoribosylformylglycinamidine cyclo-ligase 0.93 3
Pseudomonas simiae WCS417 0.45 PS417_02935 phosphoribosylamine--glycine ligase 0.52 PS417_20120 phosphoribosylaminoimidazole synthetase — —
Shewanella oneidensis MR-1 0.45 SO0441 purD phosphoribosylamine--glycine ligase (NCBI ptt file) 0.51 SO2760 purM phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) 0.97 6
Shewanella sp. ANA-3 0.45 Shewana3_0440 phosphoribosylamine--glycine ligase (RefSeq) 0.51 Shewana3_2545 phosphoribosylaminoimidazole synthetase (RefSeq) 0.95 5
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS04730 phosphoribosylamine--glycine ligase 0.53 RR42_RS17220 phosphoribosylaminoimidazole synthetase — —
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS13850 phosphoribosylamine--glycine ligase 0.47 ABZR86_RS19865 phosphoribosylformylglycinamidine cyclo-ligase low > 74
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_13750 purD phosphoribosylamine--glycine ligase 0.46 OKGIIK_02315 purM phosphoribosylformylglycinamidine cyclo-ligase 0.73 11
Rhodanobacter denitrificans MT42 0.43 LRK55_RS09805 phosphoribosylamine--glycine ligase 0.48 LRK55_RS12645 phosphoribosylformylglycinamidine cyclo-ligase low > 63
Rhodanobacter denitrificans FW104-10B01 0.43 LRK54_RS10165 phosphoribosylamine--glycine ligase 0.48 LRK54_RS12945 phosphoribosylformylglycinamidine cyclo-ligase low > 59
Synechococcus elongatus PCC 7942 0.42 Synpcc7942_0925 purD phosphoribosylamine--glycine ligase 0.46 Synpcc7942_0851 purM phosphoribosylaminoimidazole synthetase — —
Bifidobacterium breve UCC2003 0.40 BBR_RS13370 phosphoribosylamine--glycine ligase 0.43 BBR_RS13375 phosphoribosylformylglycinamidine cyclo-ligase 0.84 2
Fusobacterium nucleatum SB010 0.39 HUW76_05205 phosphoribosylamine--glycine ligase 0.43 HUW76_05175 phosphoribosylformylglycinamidine cyclo-ligase 0.99 4
Mycobacterium tuberculosis H37Rv 0.34 Rv0772 Probable phosphoribosylamine--glycine ligase PurD (GARS) (glycinamide ribonucleotide synthetase) (phosphoribosylglycinamide synthetase) (5'-phosphoribosylglycinamide synthetase) 0.37 Rv0809 Probable phosphoribosylformylglycinamidine CYCLO-ligase PurM (AIRS) (phosphoribosyl-aminoimidazole synthetase) (air synthase) — —
Methanococcus maripaludis JJ 0.24 MMJJ_RS03210 phosphoribosylamine--glycine ligase 0.26 MMJJ_RS07900 phosphoribosylformylglycinamidine cyclo-ligase — —
Methanococcus maripaludis S2 0.23 MMP_RS02095 phosphoribosylamine--glycine ligase 0.26 MMP_RS06450 phosphoribosylformylglycinamidine cyclo-ligase — —

Not shown: 10 genomes with orthologs for Dshi_2728 only; 0 genomes with orthologs for Dshi_1889 only