| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Bacteroides thetaiotaomicron VPI-5482 | 1.0 | BT1336 | | putative translation initiation inhibitor (NCBI ptt file) | 1.0 | BT3719 | | glutamate 5-kinase (EC 2.7.2.11) (from data) | 0.69 | 20 |
| Bacteroides ovatus ATCC 8483 | 0.96 | BACOVA_00589 | | putative endoribonuclease L-PSP | 0.93 | BACOVA_03537 | | glutamate 5-kinase | 0.59 | 54 |
| Bacteroides stercoris CC31F | 0.88 | HMPREF1181_RS10885 | | RidA family protein | 0.87 | HMPREF1181_RS03325 | | glutamate 5-kinase | low | > 56 |
| Phocaeicola vulgatus CL09T03C04 | 0.71 | HMPREF1058_RS18400 | | RidA family protein | 0.82 | HMPREF1058_RS08650 | | glutamate 5-kinase | 0.60 | 13 |
| Phocaeicola dorei CL03T12C01 | 0.70 | ABI39_RS14715 | | RidA family protein | 0.81 | ABI39_RS02880 | | glutamate 5-kinase | low | > 72 |
| Parabacteroides merdae CL09T00C40 | 0.63 | HMPREF1078_RS02020 | | RidA family protein | 0.73 | HMPREF1078_RS10650 | | glutamate 5-kinase | low | > 61 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.55 | GFF928 | | Endoribonuclease L-PSP | 0.26 | GFF4114 | | Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA | low | > 78 |
| Pantoea sp. MT58 | 0.55 | IAI47_16870 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.25 | IAI47_15120 | | glutamate 5-kinase | 0.84 | 31 |
| Klebsiella michiganensis M5al | 0.54 | BWI76_RS02985 | | reactive intermediate/imine deaminase | 0.25 | BWI76_RS05840 | | glutamate 5-kinase | 0.42 | 20 |
| Dickeya dianthicola ME23 | 0.54 | DZA65_RS01960 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.24 | DZA65_RS17695 | | glutamate 5-kinase | low | > 75 |
| Enterobacter sp. TBS_079 | 0.54 | MPMX20_00542 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.26 | MPMX20_00927 | | Glutamate 5-kinase | 0.37 | 33 |
| Dickeya dianthicola 67-19 | 0.54 | HGI48_RS01890 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.24 | HGI48_RS16605 | | glutamate 5-kinase | — | — |
| Enterobacter asburiae PDN3 | 0.53 | EX28DRAFT_3444 | | reactive intermediate/imine deaminase | 0.25 | EX28DRAFT_2651 | | glutamate 5-kinase | low | > 76 |
| Dickeya dadantii 3937 | 0.53 | DDA3937_RS01915 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.24 | DDA3937_RS16535 | | glutamate 5-kinase | low | > 74 |
| Rahnella sp. WP5 | 0.53 | EX31_RS12775 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.25 | EX31_RS20980 | | glutamate 5-kinase | low | > 89 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.52 | OHPLBJKB_03791 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.25 | OHPLBJKB_03398 | | Glutamate 5-kinase | low | > 73 |
| Vibrio cholerae E7946 ATCC 55056 | 0.52 | CSW01_12735 | | RidA family protein | 0.26 | CSW01_11575 | | glutamate 5-kinase | low | > 62 |
| Escherichia coli ECRC98 | 0.52 | JDDGAC_15515 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.25 | JDDGAC_13300 | proB | Glutamate 5-kinase | — | — |
| Escherichia coli BW25113 | 0.52 | b4243 | yjgF | orf, hypothetical protein (VIMSS) | 0.25 | b0242 | proB | gamma-glutamyl kinase (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.52 | NIAGMN_09725 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.25 | NIAGMN_07535 | proB | Glutamate 5-kinase | — | — |
| Escherichia coli BL21 | 0.52 | ECD_04111 | | enamine/imine deaminase, reaction intermediate detoxification | 0.25 | ECD_00239 | | gamma-glutamate kinase | low | > 60 |
| Escherichia coli ECOR38 | 0.52 | HEPCGN_10070 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.25 | HEPCGN_07780 | proB | Glutamate 5-kinase | low | > 85 |
| Escherichia coli ECRC62 | 0.52 | BNILDI_07375 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.25 | BNILDI_00245 | proB | Glutamate 5-kinase | — | — |
| Escherichia coli Nissle 1917 | 0.52 | ECOLIN_RS24615 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.25 | ECOLIN_RS01825 | | glutamate 5-kinase | low | > 52 |
| Escherichia coli ECRC101 | 0.52 | OKFHMN_11875 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.25 | OKFHMN_09675 | proB | Glutamate 5-kinase | — | — |
| Escherichia fergusonii Becca | 0.52 | EFB2_04290 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.25 | EFB2_03778 | | Glutamate 5-kinase | low | > 86 |
| Escherichia coli ECOR27 | 0.52 | NOLOHH_04135 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.25 | NOLOHH_02050 | proB | Glutamate 5-kinase | low | > 57 |
| Escherichia coli ECRC101 | 0.52 | MCAODC_02380 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.25 | MCAODC_00195 | proB | Glutamate 5-kinase | — | — |
| Escherichia coli ECRC99 | 0.52 | KEDOAH_16280 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.25 | KEDOAH_18480 | proB | Glutamate 5-kinase | — | — |
| Erwinia tracheiphila SCR3 | 0.51 | LU632_RS20960 | ridA | 2-iminobutanoate/2-iminopropanoate deaminase | 0.24 | LU632_RS01185 | proB | glutamate 5-kinase | low | > 74 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.51 | DVU2647 | | endoribonuclease, L-PSP family (TIGR) | 0.25 | DVU0930 | proB | glutamate 5-kinase (TIGR) | low | > 55 |
| Pectobacterium carotovorum WPP14 | 0.50 | HER17_RS19520 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.23 | HER17_RS04700 | | glutamate 5-kinase | low | > 75 |
| Pseudomonas syringae pv. syringae B728a | 0.49 | Psyr_0208 | | endoribonuclease L-PSP | 0.23 | Psyr_0704 | | glutamate 5-kinase | 0.69 | 15 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.49 | CA265_RS22825 | | reactive intermediate/imine deaminase | 0.52 | CA265_RS20855 | | glutamate 5-kinase (EC 2.7.2.11) (from data) | 0.88 | 7 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.49 | Psyr_0208 | | endoribonuclease L-PSP | 0.23 | Psyr_0704 | | glutamate 5-kinase | low | > 86 |
| Synechococcus elongatus PCC 7942 | 0.49 | Synpcc7942_0972 | | YjgF-like protein | 0.27 | Synpcc7942_2197 | proB | gamma-glutamyl kinase | — | — |
| Serratia liquefaciens MT49 | 0.48 | IAI46_02265 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.26 | IAI46_04430 | | glutamate 5-kinase | low | > 86 |
| Pseudomonas fluorescens FW300-N2E2 | 0.48 | Pf6N2E2_4360 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.23 | Pf6N2E2_5103 | | Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA | low | > 103 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.48 | ABZR88_RS17245 | | RidA family protein | 0.54 | ABZR88_RS22170 | | glutamate 5-kinase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.48 | AO356_12475 | | reactive intermediate/imine deaminase | 0.23 | AO356_15815 | | gamma-glutamyl kinase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_09285 | | reactive intermediate/imine deaminase | 0.23 | AO353_14115 | | gamma-glutamyl kinase | 0.50 | 55 |
| Pseudomonas fluorescens GW456-L13 | 0.47 | PfGW456L13_779 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.23 | PfGW456L13_1472 | | Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA | 0.66 | 26 |
| Pseudomonas fluorescens SBW25-INTG | 0.47 | PFLU_RS29515 | | RidA family protein | 0.25 | PFLU_RS25360 | | glutamate 5-kinase | low | > 109 |
| Pseudomonas putida KT2440 | 0.47 | PP_5303 | | aminoacrylate/iminopropionate hydrolase/deaminase | 0.23 | PP_0691 | | Glutamate 5-kinase | low | > 96 |
| Pseudomonas simiae WCS417 | 0.47 | PS417_27835 | | endoribonuclease | 0.25 | PS417_23545 | | gamma-glutamyl kinase | 0.48 | 75 |
| Pseudomonas fluorescens SBW25 | 0.47 | PFLU_RS29515 | | RidA family protein | 0.25 | PFLU_RS25360 | | glutamate 5-kinase | low | > 109 |
| Pseudomonas sp. RS175 | 0.47 | PFR28_04425 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.23 | PFR28_03769 | | Glutamate 5-kinase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.47 | Pf1N1B4_2112 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.25 | Pf1N1B4_2800 | | Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA | — | — |
| Lysobacter sp. OAE881 | 0.46 | ABIE51_RS17260 | | RidA family protein | 0.20 | ABIE51_RS13370 | | glutamate 5-kinase | 0.82 | 60 |
| Pseudomonas sp. S08-1 | 0.46 | OH686_13545 | | RidA/YER057c/UK114 superfamily protein | 0.23 | OH686_16305 | | Glutamate 5-kinase / RNA-binding C-terminal domain PUA | low | > 80 |
| Dyella japonica UNC79MFTsu3.2 | 0.46 | ABZR86_RS11845 | | RidA family protein | 0.19 | ABZR86_RS08685 | | glutamate 5-kinase | 0.87 | 1 |
| Azospirillum brasilense Sp245 | 0.45 | AZOBR_RS32435 | | dfrA | 0.28 | AZOBR_RS04095 | | glutamate 5-kinase | — | — |
| Shewanella oneidensis MR-1 | 0.45 | SO1404 | | endoribonuclease L-PSP, putative (NCBI ptt file) | 0.23 | SO1121 | proB | glutamate 5-kinase (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.45 | Shewana3_2971 | | putative endoribonuclease L-PSP (RefSeq) | 0.23 | Shewana3_0954 | | gamma-glutamyl kinase (RefSeq) | low | > 73 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.44 | CA264_17590 | | RidA family protein | 0.46 | CA264_07725 | | glutamate 5-kinase | low | > 74 |
| Pseudomonas stutzeri RCH2 | 0.44 | Psest_3818 | | endoribonuclease L-PSP, putative | 0.23 | Psest_3384 | | glutamate 5-kinase | 0.76 | 24 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.44 | Xcc-8004.1205.1 | | hypothetical protein | 0.20 | Xcc-8004.2326.1 | | Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA | 0.61 | 62 |
| Rhodanobacter denitrificans MT42 | 0.43 | LRK55_RS11525 | | RidA family protein | 0.22 | LRK55_RS02130 | | glutamate 5-kinase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.43 | LRK54_RS11800 | | RidA family protein | 0.22 | LRK54_RS02375 | | glutamate 5-kinase | 0.60 | 34 |
| Rhodanobacter sp. FW510-T8 | 0.43 | OKGIIK_12095 | ridA | reactive intermediate/imine deaminase | 0.21 | OKGIIK_09420 | proB | glutamate 5-kinase | low | > 52 |
| Dechlorosoma suillum PS | 0.43 | Dsui_0312 | | endoribonuclease L-PSP, putative | 0.27 | Dsui_0166 | | glutamate 5-kinase | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.43 | Echvi_1327 | | endoribonuclease L-PSP, putative | 0.50 | Echvi_4033 | | glutamate 5-kinase (EC 2.7.2.11) (from data) | low | > 79 |
| Alteromonas macleodii MIT1002 | 0.42 | MIT1002_00109 | | Putative reactive intermediate deaminase TdcF | 0.19 | MIT1002_04056 | | Glutamate 5-kinase | low | > 70 |
| Paraburkholderia sabiae LMG 24235 | 0.42 | QEN71_RS41190 | | RidA family protein | 0.27 | QEN71_RS27270 | | glutamate 5-kinase | — | — |
| Castellaniella sp019104865 MT123 | 0.41 | ABCV34_RS03565 | | Rid family detoxifying hydrolase | 0.26 | ABCV34_RS10800 | | glutamate 5-kinase | — | — |
| Bifidobacterium breve UCC2003 | 0.41 | BBR_RS12070 | | endoribonuclease L-PSP | 0.24 | BBR_RS19445 | | glutamate 5-kinase | low | > 34 |
| Shewanella amazonensis SB2B | 0.40 | Sama_0263 | | YjgF-like protein (RefSeq) | 0.28 | Sama_2516 | | gamma-glutamyl kinase (RefSeq) | 0.66 | 46 |
| Ralstonia solanacearum IBSBF1503 | 0.40 | RALBFv3_RS20925 | | endoribonuclease L-PSP | 0.26 | RALBFv3_RS06145 | | glutamate 5-kinase | low | > 76 |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_02797 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.26 | MPMX26_02135 | | Glutamate 5-kinase | 0.83 | 4 |
| Ralstonia solanacearum UW163 | 0.40 | UW163_RS22060 | | endoribonuclease L-PSP | 0.26 | UW163_RS07480 | | glutamate 5-kinase | — | — |
| Shewanella loihica PV-4 | 0.40 | Shew_3500 | | putative endoribonuclease L-PSP (RefSeq) | 0.26 | Shew_2848 | | gamma-glutamyl kinase (RefSeq) | 0.73 | 41 |
| Marinobacter adhaerens HP15 | 0.39 | HP15_306 | | YjgF-like protein | 0.22 | HP15_508 | | gamma-glutamyl kinase | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.36 | DvMF_1512 | | endoribonuclease L-PSP (RefSeq) | 0.25 | DvMF_1377 | | gamma-glutamyl kinase (RefSeq) | — | — |
| Dinoroseobacter shibae DFL-12 | 0.35 | Dshi_0720 | | Endoribonuclease L-PSP (RefSeq) | 0.25 | Dshi_1467 | | glutamate 5-kinase (RefSeq) | — | — |
| Variovorax sp. SCN45 | 0.35 | GFF6707 | | RidA/YER057c/UK114 superfamily protein | 0.24 | GFF2515 | | Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA | low | > 127 |
| Cupriavidus basilensis FW507-4G11 | 0.35 | RR42_RS16710 | | endoribonuclease L-PSP | 0.26 | RR42_RS17940 | | gamma-glutamyl kinase | low | > 128 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.34 | H281DRAFT_03549 | | reactive intermediate/imine deaminase | 0.26 | H281DRAFT_06264 | | glutamate 5-kinase | low | > 103 |
| Variovorax sp. OAS795 | 0.34 | ABID97_RS26145 | | RidA family protein | 0.25 | ABID97_RS23400 | | glutamate 5-kinase | — | — |
| Azospirillum sp. SherDot2 | 0.34 | MPMX19_04018 | | 2-aminomuconate deaminase | 0.29 | MPMX19_01933 | | Glutamate 5-kinase | — | — |
| Paraburkholderia graminis OAS925 | 0.34 | ABIE53_004706 | | 2-iminobutanoate/2-iminopropanoate deaminase | 0.26 | ABIE53_003588 | | glutamate 5-kinase | low | > 113 |
| Herbaspirillum seropedicae SmR1 | 0.32 | HSERO_RS05705 | | endoribonuclease L-PSP | 0.25 | HSERO_RS01815 | | gamma-glutamyl kinase | low | > 78 |
| Burkholderia phytofirmans PsJN | 0.32 | BPHYT_RS34350 | | endoribonuclease L-PSP | 0.26 | BPHYT_RS17110 | | glutamate 5-kinase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.32 | GFF3622 | | Bona fide RidA/YjgF/TdcF/RutC subgroup | 0.23 | GFF1274 | | Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA | low | > 90 |
| Sinorhizobium meliloti 1021 | 0.32 | SM_b21139 | | translation initiation inhibitors | 0.26 | SMc03776 | | gamma-glutamyl kinase | low | > 103 |
| Agrobacterium fabrum C58 | 0.32 | Atu2498 | | hypothetical protein | 0.26 | Atu2780 | | gamma-glutamyl kinase | — | — |
| Ralstonia solanacearum GMI1000 | 0.31 | RS_RS23660 | | RidA family protein | 0.23 | RS_RS14095 | | glutamate 5-kinase | — | — |
| Caulobacter crescentus NA1000 | 0.30 | CCNA_02886 | | RutC-family pyrimidine utilization protein C | 0.23 | CCNA_00316 | | glutamate 5-kinase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.30 | CCNA_02886 | | RutC-family pyrimidine utilization protein C | 0.23 | CCNA_00316 | | glutamate 5-kinase | low | > 67 |
| Ralstonia sp. UNC404CL21Col | 0.30 | ABZR87_RS05790 | | RidA family protein | 0.25 | ABZR87_RS01810 | | glutamate 5-kinase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.29 | RPSI07_RS05465 | | RidA family protein | 0.24 | RPSI07_RS11095 | | glutamate 5-kinase | low | > 81 |
| Bosea sp. OAE506 | 0.27 | ABIE41_RS17855 | | RidA family protein | 0.27 | ABIE41_RS07585 | | glutamate 5-kinase | — | — |
| Rhizobium sp. OAE497 | 0.27 | ABIE40_RS21405 | | RidA family protein | 0.26 | ABIE40_RS18920 | | glutamate 5-kinase | low | > 107 |
| Acidovorax sp. GW101-3H11 | 0.27 | Ac3H11_699 | | RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein | 0.25 | Ac3H11_4771 | | Glutamate 5-kinase (EC 2.7.2.11) | low | > 79 |
| Sphingomonas koreensis DSMZ 15582 | 0.27 | Ga0059261_1670 | | Putative translation initiation inhibitor, yjgF family | 0.18 | Ga0059261_3512 | | glutamate 5-kinase (EC 2.7.2.11) (from data) | low | > 68 |
| Rhodopseudomonas palustris CGA009 | 0.24 | TX73_018610 | | RidA family protein | 0.26 | TX73_000850 | | glutamate 5-kinase | — | — |
| Rhodospirillum rubrum S1H | 0.23 | Rru_A1174 | | Endoribonuclease L-PSP (NCBI) | 0.27 | Rru_A1239 | | Glutamate 5-kinase, ProB-related (NCBI) | low | > 58 |
| Magnetospirillum magneticum AMB-1 | 0.20 | AMB_RS19400 | | RidA family protein | 0.25 | AMB_RS20630 | | glutamate 5-kinase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.20 | A4249_RS08755 | | RidA family protein | 0.20 | A4249_RS16125 | | glutamate 5-kinase | low | > 48 |
Not shown: 2 genomes with orthologs for BT1336 only; 2 genomes with orthologs for BT3719 only