Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Bacteroides thetaiotaomicron VPI-5482 | 1.0 | BT0533 | | tryptophan synthase beta chain (NCBI ptt file) | 1.0 | BT0202 | | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | 0.89 | 9 |
Bacteroides ovatus ATCC 8483 | 0.94 | BACOVA_03779 | | tryptophan synthase, beta subunit | 0.92 | BACOVA_01233 | | histidinol-phosphate transaminase | 0.94 | 7 |
Bacteroides stercoris CC31F | 0.91 | HMPREF1181_RS15320 | | tryptophan synthase subunit beta | 0.84 | HMPREF1181_RS04855 | | histidinol-phosphate transaminase | 0.81 | 48 |
Phocaeicola dorei CL03T12C01 | 0.88 | ABI39_RS21045 | | tryptophan synthase subunit beta | 0.78 | ABI39_RS11840 | | histidinol-phosphate transaminase | 0.78 | 11 |
Phocaeicola vulgatus CL09T03C04 | 0.88 | HMPREF1058_RS07170 | | tryptophan synthase subunit beta | 0.78 | HMPREF1058_RS15880 | | histidinol-phosphate transaminase | 0.94 | 7 |
Parabacteroides merdae CL09T00C40 | 0.87 | HMPREF1078_RS00150 | | tryptophan synthase subunit beta | 0.60 | HMPREF1078_RS02445 | | histidinol-phosphate transaminase | 0.99 | 4 |
Pontibacter actiniarum KMM 6156, DSM 19842 | 0.69 | CA264_05080 | | tryptophan synthase subunit beta | 0.50 | CA264_05035 | | histidinol-phosphate transaminase | low | > 74 |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.67 | Echvi_2510 | | tryptophan synthase, beta subunit | 0.52 | Echvi_2458 | | histidinol-phosphate aminotransferase | — | — |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.67 | ABZR88_RS10665 | | tryptophan synthase subunit beta | 0.52 | ABZR88_RS06875 | | histidinol-phosphate transaminase | — | — |
Pedobacter sp. GW460-11-11-14-LB5 | 0.67 | CA265_RS05020 | | tryptophan synthase subunit beta | 0.55 | CA265_RS03630 | | histidinol-phosphate transaminase | — | — |
Ralstonia sp. UNC404CL21Col | 0.54 | ABZR87_RS14500 | | tryptophan synthase subunit beta | 0.21 | ABZR87_RS02495 | | histidinol-phosphate transaminase | low | > 80 |
Ralstonia solanacearum PSI07 | 0.54 | RPSI07_RS14730 | | tryptophan synthase subunit beta | 0.22 | RPSI07_RS10395 | | histidinol-phosphate transaminase | — | — |
Magnetospirillum magneticum AMB-1 | 0.54 | AMB_RS20295 | | tryptophan synthase subunit beta | 0.19 | AMB_RS20110 | | histidinol-phosphate aminotransferase | — | — |
Ralstonia solanacearum UW163 | 0.54 | UW163_RS11140 | | tryptophan synthase subunit beta | 0.22 | UW163_RS06775 | | histidinol-phosphate transaminase | — | — |
Pseudomonas stutzeri RCH2 | 0.54 | Psest_0063 | | tryptophan synthase, beta subunit | 0.20 | Psest_1985 | | histidinol-phosphate aminotransferase | low | > 67 |
Ralstonia solanacearum IBSBF1503 | 0.54 | RALBFv3_RS02585 | | tryptophan synthase subunit beta | 0.22 | RALBFv3_RS06840 | | histidinol-phosphate transaminase | — | — |
Pseudomonas sp. S08-1 | 0.54 | OH686_12425 | | tryptophan synthase, beta subunit | 0.20 | OH686_20875 | | histidinol-phosphate transaminase | low | > 80 |
Ralstonia solanacearum GMI1000 | 0.53 | RS_RS09965 | | tryptophan synthase subunit beta | 0.22 | RS_RS14785 | | histidinol-phosphate aminotransferase 1 | — | — |
Sphingomonas koreensis DSMZ 15582 | 0.53 | Ga0059261_0238 | | tryptophan synthase, beta subunit | 0.19 | Ga0059261_2299 | | histidinol-phosphate aminotransferase | — | — |
Pseudomonas simiae WCS417 | 0.53 | PS417_00185 | | tryptophan synthase subunit beta | 0.20 | PS417_08130 | | aspartate aminotransferase | low | > 88 |
Pseudomonas fluorescens SBW25-INTG | 0.53 | PFLU_RS00180 | | tryptophan synthase subunit beta | 0.20 | PFLU_RS08100 | | histidinol-phosphate transaminase | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.53 | PFLU_RS00180 | | tryptophan synthase subunit beta | 0.20 | PFLU_RS08100 | | histidinol-phosphate transaminase | low | > 109 |
Pseudomonas fluorescens FW300-N1B4 | 0.53 | Pf1N1B4_1831 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.21 | Pf1N1B4_349 | | Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) | 0.53 | 72 |
Pseudomonas fluorescens GW456-L13 | 0.53 | PfGW456L13_566 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.20 | PfGW456L13_2177 | | Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) | low | > 87 |
Pseudomonas syringae pv. syringae B728a | 0.53 | Psyr_0034 | | tryptophan synthase, beta chain | 0.18 | Psyr_4132 | | histidinol phosphate aminotransferase apoenzyme | 0.53 | 33 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.53 | Psyr_0034 | | tryptophan synthase, beta chain | 0.18 | Psyr_4132 | | histidinol phosphate aminotransferase apoenzyme | low | > 86 |
Rhodospirillum rubrum S1H | 0.53 | Rru_A3427 | | Tryptophan synthase, beta chain (NCBI) | 0.18 | Rru_A3264 | | Histidinol-phosphate aminotransferase (NCBI) | 0.78 | 29 |
Pseudomonas fluorescens FW300-N2E3 | 0.53 | AO353_10710 | | tryptophan synthase subunit beta | 0.21 | AO353_02065 | | aspartate aminotransferase | 0.56 | 72 |
Acinetobacter radioresistens SK82 | 0.53 | MPMX26_02617 | | Tryptophan synthase beta chain | 0.16 | MPMX26_02586 | | Histidinol-phosphate aminotransferase | 0.95 | 14 |
Pseudomonas putida KT2440 | 0.53 | PP_0083 | | tryptophan synthase beta chain | 0.17 | PP_0967 | | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | 0.84 | 9 |
Pseudomonas fluorescens FW300-N2C3 | 0.52 | AO356_10915 | | tryptophan synthase subunit beta | 0.20 | AO356_03460 | | aspartate aminotransferase | low | > 104 |
Lysobacter sp. OAE881 | 0.52 | ABIE51_RS08260 | | tryptophan synthase subunit beta | 0.27 | ABIE51_RS13320 | | histidinol-phosphate transaminase | 0.79 | 22 |
Pseudomonas fluorescens FW300-N2E2 | 0.52 | Pf6N2E2_4048 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.20 | Pf6N2E2_2519 | | Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) | low | > 103 |
Azospirillum sp. SherDot2 | 0.52 | MPMX19_02736 | | Tryptophan synthase beta chain | 0.18 | MPMX19_04389 | | Histidinol-phosphate aminotransferase | — | — |
Rhodanobacter sp. FW510-T8 | 0.52 | OKGIIK_04845 | trpB | tryptophan synthase subunit beta | 0.32 | OKGIIK_04955 | hisC | histidinol-phosphate transaminase | low | > 52 |
Azospirillum brasilense Sp245 | 0.52 | AZOBR_RS00525 | | tryptophan synthase subunit beta | 0.19 | AZOBR_RS20485 | | histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) | 0.86 | 11 |
Paraburkholderia sabiae LMG 24235 | 0.52 | QEN71_RS17645 | | tryptophan synthase subunit beta | 0.24 | QEN71_RS27860 | | histidinol-phosphate transaminase | 0.52 | 151 |
Dyella japonica UNC79MFTsu3.2 | 0.52 | ABZR86_RS08000 | | tryptophan synthase subunit beta | 0.30 | ABZR86_RS06725 | | histidinol-phosphate transaminase | 0.93 | 26 |
Pseudomonas sp. RS175 | 0.52 | PFR28_04715 | | Tryptophan synthase beta chain | 0.21 | PFR28_00908 | | Histidinol-phosphate aminotransferase | — | — |
Rhodanobacter denitrificans FW104-10B01 | 0.52 | LRK54_RS01685 | | tryptophan synthase subunit beta | 0.32 | LRK54_RS01600 | | histidinol-phosphate transaminase | low | > 59 |
Burkholderia phytofirmans PsJN | 0.52 | BPHYT_RS33875 | | tryptophan synthase subunit alpha | 0.25 | BPHYT_RS17705 | | histidinol-phosphate aminotransferase | low | > 109 |
Paraburkholderia graminis OAS925 | 0.52 | ABIE53_004809 | | tryptophan synthase beta chain | 0.25 | ABIE53_003700 | | histidinol-phosphate aminotransferase | — | — |
Rhodanobacter denitrificans MT42 | 0.52 | LRK55_RS01465 | | tryptophan synthase subunit beta | 0.32 | LRK55_RS01380 | | histidinol-phosphate transaminase | low | > 63 |
Methanococcus maripaludis S2 | 0.52 | MMP_RS05190 | | tryptophan synthase subunit beta | 0.21 | MMP_RS06260 | | histidinol-phosphate transaminase | — | — |
Methanococcus maripaludis JJ | 0.52 | MMJJ_RS09190 | | tryptophan synthase subunit beta | 0.21 | MMJJ_RS08090 | | histidinol-phosphate transaminase | — | — |
Dechlorosoma suillum PS | 0.52 | Dsui_3192 | | tryptophan synthase, beta subunit | 0.16 | Dsui_1414 | | histidinol-phosphate aminotransferase | — | — |
Paraburkholderia bryophila 376MFSha3.1 | 0.52 | H281DRAFT_06067 | | tryptophan synthase, beta chain | 0.25 | H281DRAFT_05654 | | histidinol phosphate aminotransferase apoenzyme | low | > 103 |
Synechococcus elongatus PCC 7942 | 0.52 | Synpcc7942_2143 | trpB | tryptophan synthase subunit beta | 0.19 | Synpcc7942_1030 | hisC | histidinol-phosphate aminotransferase | — | — |
Acidovorax sp. GW101-3H11 | 0.51 | Ac3H11_1534 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.19 | Ac3H11_4729 | | histidinol-phosphate transaminase (EC 2.6.1.9) (from data) | — | — |
Phaeobacter inhibens DSM 17395 | 0.51 | PGA1_c04870 | | tryptophan synthase beta chain | 0.17 | PGA1_c25240 | | histidinol-phosphate aminotransferase [EC:2.6.1.9] (from data) | — | — |
Sinorhizobium meliloti 1021 | 0.51 | SMc02766 | | tryptophan synthase subunit beta | 0.17 | SMa0387 | | histidinol-phosphate aminotransferase | low | > 103 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.51 | GFF3355 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.21 | GFF1313 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | low | > 90 |
Xanthomonas campestris pv. campestris strain 8004 | 0.51 | Xcc-8004.1964.1 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.31 | Xcc-8004.2947.1 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | 0.93 | 11 |
Variovorax sp. SCN45 | 0.51 | GFF3883 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.23 | GFF5348 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | — | — |
Cupriavidus basilensis FW507-4G11 | 0.51 | RR42_RS14360 | | tryptophan synthase subunit alpha | 0.24 | RR42_RS18910 | | histidinol-phosphate aminotransferase | — | — |
Dinoroseobacter shibae DFL-12 | 0.51 | Dshi_1031 | | tryptophan synthase, beta subunit (RefSeq) | 0.16 | Dshi_2946 | | histidinol-phosphate aminotransferase (RefSeq) | — | — |
Rhizobium sp. OAE497 | 0.51 | ABIE40_RS19335 | | tryptophan synthase subunit beta | 0.16 | ABIE40_RS17595 | | histidinol-phosphate transaminase | — | — |
Castellaniella sp019104865 MT123 | 0.51 | ABCV34_RS08435 | | tryptophan synthase subunit beta | 0.19 | ABCV34_RS07105 | | histidinol-phosphate transaminase | — | — |
Variovorax sp. OAS795 | 0.50 | ABID97_RS08430 | | tryptophan synthase subunit beta | 0.23 | ABID97_RS23145 | | histidinol-phosphate transaminase | low | > 91 |
Rhodopseudomonas palustris CGA009 | 0.50 | TX73_000360 | | tryptophan synthase subunit beta | 0.18 | TX73_023035 | | histidinol-phosphate transaminase | — | — |
Herbaspirillum seropedicae SmR1 | 0.50 | HSERO_RS16475 | | tryptophan synthase subunit alpha | 0.23 | HSERO_RS20335 | | histidinol-phosphate aminotransferase | low | > 78 |
Agrobacterium fabrum C58 | 0.50 | Atu0018 | | tryptophan synthase beta subunit | 0.15 | Atu3612 | | histidinol-phosphate aminotransferase | — | — |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.50 | A4249_RS11330 | | tryptophan synthase subunit beta | 0.16 | A4249_RS11450 | | histidinol-phosphate transaminase | — | — |
Dickeya dadantii 3937 | 0.50 | DDA3937_RS10465 | | tryptophan synthase subunit beta | 0.28 | DDA3937_RS09730 | | histidinol-phosphate transaminase | 0.66 | 46 |
Dickeya dianthicola ME23 | 0.50 | DZA65_RS10945 | | tryptophan synthase subunit beta | 0.28 | DZA65_RS10050 | | histidinol-phosphate transaminase | low | > 75 |
Dickeya dianthicola 67-19 | 0.50 | HGI48_RS10465 | | tryptophan synthase subunit beta | 0.28 | HGI48_RS09740 | | histidinol-phosphate transaminase | low | > 71 |
Shewanella oneidensis MR-1 | 0.50 | SO3023 | trpB | tryptophan synthase, beta subunit (NCBI ptt file) | 0.23 | SO2072 | hisC | histidinol-phosphate aminotransferase (NCBI ptt file) | 0.92 | 22 |
Shewanella loihica PV-4 | 0.49 | Shew_2255 | | tryptophan synthase subunit beta (RefSeq) | 0.24 | Shew_2199 | | histidinol-phosphate aminotransferase (RefSeq) | 0.90 | 47 |
Pectobacterium carotovorum WPP14 | 0.49 | HER17_RS10935 | | tryptophan synthase subunit beta | 0.30 | HER17_RS12235 | | histidinol-phosphate transaminase | 0.97 | 14 |
Shewanella amazonensis SB2B | 0.49 | Sama_2133 | | tryptophan synthase subunit beta (RefSeq) | 0.20 | Sama_1943 | | histidinol-phosphate aminotransferase (RefSeq) | 0.89 | 37 |
Serratia liquefaciens MT49 | 0.49 | IAI46_14040 | | tryptophan synthase subunit beta | 0.27 | IAI46_08205 | | histidinol-phosphate transaminase | low | > 86 |
Enterobacter sp. TBS_079 | 0.49 | MPMX20_02513 | | Tryptophan synthase beta chain | 0.29 | MPMX20_03003 | | Histidinol-phosphate aminotransferase | 0.93 | 12 |
Escherichia fergusonii Becca | 0.49 | EFB2_02665 | | Tryptophan synthase beta chain | 0.27 | EFB2_01835 | | Histidinol-phosphate aminotransferase | low | > 86 |
Pantoea sp. MT58 | 0.49 | IAI47_09170 | | tryptophan synthase subunit beta | 0.31 | IAI47_07085 | | histidinol-phosphate transaminase | 0.95 | 5 |
Escherichia coli ECRC99 | 0.49 | KEDOAH_26080 | trpB | tryptophan synthase subunit beta | 0.28 | KEDOAH_03640 | hisC | histidinol-phosphate transaminase | — | — |
Enterobacter asburiae PDN3 | 0.49 | EX28DRAFT_0933 | | tryptophan synthase, beta subunit | 0.29 | EX28DRAFT_0538 | | histidinol-phosphate aminotransferase | 0.62 | 45 |
Escherichia coli ECRC62 | 0.49 | BNILDI_18475 | trpB | tryptophan synthase subunit beta | 0.27 | BNILDI_14735 | hisC | histidinol-phosphate transaminase | — | — |
Escherichia coli BW25113 | 0.49 | b1261 | trpB | tryptophan synthase subunit beta (NCBI) | 0.27 | b2021 | hisC | histidinol-phosphate aminotransferase (NCBI) | 0.91 | 17 |
Escherichia coli ECRC102 | 0.49 | NIAGMN_26840 | trpB | tryptophan synthase subunit beta | 0.28 | NIAGMN_22455 | hisC | histidinol-phosphate transaminase | — | — |
Escherichia coli ECRC101 | 0.49 | OKFHMN_02670 | trpB | tryptophan synthase subunit beta | 0.28 | OKFHMN_24510 | hisC | histidinol-phosphate transaminase | — | — |
Escherichia coli ECOR27 | 0.49 | NOLOHH_20330 | trpB | tryptophan synthase subunit beta | 0.28 | NOLOHH_15825 | hisC | histidinol-phosphate transaminase | 0.66 | 55 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.49 | OHPLBJKB_02422 | | Tryptophan synthase beta chain | 0.28 | OHPLBJKB_01679 | | Histidinol-phosphate aminotransferase | low | > 73 |
Escherichia coli ECRC98 | 0.49 | JDDGAC_05215 | trpB | tryptophan synthase subunit beta | 0.28 | JDDGAC_28620 | hisC | histidinol-phosphate transaminase | — | — |
Escherichia coli ECRC101 | 0.49 | MCAODC_15595 | trpB | tryptophan synthase subunit beta | 0.28 | MCAODC_20430 | hisC | histidinol-phosphate transaminase | — | — |
Escherichia coli ECOR38 | 0.49 | HEPCGN_25520 | trpB | tryptophan synthase subunit beta | 0.27 | HEPCGN_03215 | hisC | histidinol-phosphate transaminase | low | > 85 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.49 | GFF2725 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.28 | GFF3911 | | Histidinol-phosphate aminotransferase (EC 2.6.1.9) | low | > 78 |
Escherichia coli Nissle 1917 | 0.49 | ECOLIN_RS07600 | | tryptophan synthase subunit beta | 0.27 | ECOLIN_RS11950 | | histidinol-phosphate transaminase | — | — |
Erwinia tracheiphila SCR3 | 0.49 | LU632_RS12770 | trpB | tryptophan synthase subunit beta | 0.28 | LU632_RS08940 | hisC | histidinol-phosphate transaminase | 0.43 | 57 |
Klebsiella michiganensis M5al | 0.49 | BWI76_RS11845 | | tryptophan synthase subunit beta | 0.28 | BWI76_RS18930 | | histidinol-phosphate transaminase | 0.86 | 35 |
Escherichia coli BL21 | 0.49 | ECD_01235 | | tryptophan synthase, beta subunit | 0.27 | ECD_01923 | | histidinol-phosphate aminotransferase | low | > 60 |
Rahnella sp. WP5 | 0.49 | EX31_RS09975 | | tryptophan synthase subunit beta | 0.27 | EX31_RS11445 | | histidinol-phosphate transaminase | 0.97 | 22 |
Vibrio cholerae E7946 ATCC 55056 | 0.48 | CSW01_05930 | | tryptophan synthase subunit beta | 0.27 | CSW01_05755 | | histidinol-phosphate transaminase | low | > 62 |
Desulfovibrio vulgaris Hildenborough JW710 | 0.48 | DVU0085 | trpB-1 | tryptophan synthase, beta subunit (TIGR) | 0.25 | DVU1029 | hisC | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | low | > 55 |
Caulobacter crescentus NA1000 | 0.48 | CCNA_03658 | | tryptophan synthase beta chain | 0.19 | CCNA_02306 | | histidinol-phosphate aminotransferase | 0.83 | 43 |
Caulobacter crescentus NA1000 Δfur | 0.48 | CCNA_03658 | | tryptophan synthase beta chain | 0.19 | CCNA_02306 | | histidinol-phosphate aminotransferase | low | > 67 |
Alteromonas macleodii MIT1002 | 0.48 | MIT1002_01426 | | Tryptophan synthase beta chain | 0.27 | MIT1002_02634 | | Histidinol-phosphate aminotransferase | — | — |
Desulfovibrio vulgaris Miyazaki F | 0.47 | DvMF_1741 | | tryptophan synthase subunit beta (RefSeq) | 0.23 | DvMF_0908 | | histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) | 0.88 | 16 |
Kangiella aquimarina DSM 16071 | 0.46 | B158DRAFT_2429 | | tryptophan synthase, beta subunit | 0.19 | B158DRAFT_2325 | | histidinol-phosphate aminotransferase | low | > 40 |
Not shown: 4 genomes with orthologs for BT0533 only; 2 genomes with orthologs for BT0202 only