Conservation of cofitness between SO2441 and SO2761 in Shewanella oneidensis MR-1

106 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO2441 thiG thiG protein (NCBI ptt file) 1.0 SO2761 purN phosphoribosylglycinamide formyltransferase (NCBI ptt file) 0.47 4
Shewanella sp. ANA-3 0.95 Shewana3_1940 thiG thiazole synthase (RefSeq) 0.95 Shewana3_2546 purN phosphoribosylglycinamide formyltransferase (RefSeq) low > 73
Shewanella loihica PV-4 0.73 Shew_2092 thiazole biosynthesis family protein (RefSeq) 0.80 Shew_1512 phosphoribosylglycinamide formyltransferase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.73 Sama_1856 thiG thiazole synthase (RefSeq) 0.78 Sama_2098 purN phosphoribosylglycinamide formyltransferase (RefSeq) low > 62
Dickeya dadantii 3937 0.68 DDA3937_RS01155 thiazole synthase 0.52 DDA3937_RS06020 phosphoribosylglycinamide formyltransferase low > 74
Dickeya dianthicola ME23 0.68 DZA65_RS01195 thiazole synthase 0.53 DZA65_RS06415 phosphoribosylglycinamide formyltransferase low > 75
Dickeya dianthicola 67-19 0.67 HGI48_RS01150 thiazole synthase 0.52 HGI48_RS06065 phosphoribosylglycinamide formyltransferase low > 71
Rahnella sp. WP5 0.67 EX31_RS16795 thiazole synthase 0.54 EX31_RS22690 phosphoribosylglycinamide formyltransferase low > 89
Erwinia tracheiphila HP pepo 2.2 0.66 IJEDHG_10865 thiazole synthase 0.51 IJEDHG_18360 purN phosphoribosylglycinamide formyltransferase low > 61
Erwinia tracheiphila SCR3 0.66 LU632_RS00950 thiazole synthase 0.51 LU632_RS08270 purN phosphoribosylglycinamide formyltransferase low > 74
Cellulophaga baltica 18 0.66 M666_RS10615 thiazole synthase 0.24 M666_RS04095 phosphoribosylglycinamide formyltransferase low > 67
Pedobacter sp. GW460-11-11-14-LB5 0.65 CA265_RS20180 thiazole synthase 0.25 CA265_RS02710 phosphoribosylglycinamide formyltransferase — —
Pectobacterium carotovorum WPP14 0.65 HER17_RS20400 thiazole synthase 0.50 HER17_RS15470 phosphoribosylglycinamide formyltransferase low > 75
Serratia liquefaciens MT49 0.65 IAI46_01300 thiazole synthase 0.51 IAI46_18890 phosphoribosylglycinamide formyltransferase low > 86
Pontibacter actiniarum KMM 6156, DSM 19842 0.65 CA264_20420 thiazole synthase 0.27 CA264_18635 phosphoribosylglycinamide formyltransferase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.64 ABZR88_RS08825 thiazole synthase 0.25 ABZR88_RS01870 phosphoribosylglycinamide formyltransferase — —
Klebsiella pneumoniae MKP103 0.64 KDGMDA_10020 thiazole synthase 0.50 KDGMDA_27810 phosphoribosylglycinamide formyltransferase low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF4202 Thiazole biosynthesis protein ThiG 0.54 GFF2168 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 78
Klebsiella michiganensis M5al 0.63 BWI76_RS01535 thiazole synthase 0.50 BWI76_RS20970 phosphoribosylglycinamide formyltransferase low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_04060 Thiazole synthase 0.55 OHPLBJKB_01226 Phosphoribosylglycinamide formyltransferase low > 74
Escherichia coli ECRC101 0.63 MCAODC_03895 thiG thiazole synthase 0.55 MCAODC_12335 purN phosphoribosylglycinamide formyltransferase low > 88
Escherichia coli ECRC99 0.63 KEDOAH_14765 thiG thiazole synthase 0.55 KEDOAH_06415 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC100 0.63 OKFHMN_13395 thiG thiazole synthase 0.55 OKFHMN_21805 purN phosphoribosylglycinamide formyltransferase 0.66 56
Escherichia coli ECRC102 0.63 NIAGMN_11145 thiG thiazole synthase 0.55 NIAGMN_19575 purN phosphoribosylglycinamide formyltransferase 0.71 8
Enterobacter sp. TBS_079 0.63 MPMX20_00213 Thiazole synthase 0.52 MPMX20_03355 Phosphoribosylglycinamide formyltransferase low > 85
Escherichia coli BW25113 0.63 b3991 thiG thiamin biosynthesis, thiazole moiety (VIMSS) 0.55 b2500 purN phosphoribosylglycinamide formyltransferase (NCBI) low > 76
Escherichia coli ECOR27 0.63 NOLOHH_05540 thiG thiazole synthase 0.55 NOLOHH_13455 purN phosphoribosylglycinamide formyltransferase 0.75 17
Escherichia coli ECRC62 0.63 BNILDI_05985 thiG thiazole synthase 0.55 BNILDI_12265 purN phosphoribosylglycinamide formyltransferase low > 75
Escherichia coli ECRC98 0.63 JDDGAC_17020 thiG thiazole synthase 0.55 JDDGAC_25750 purN phosphoribosylglycinamide formyltransferase low > 87
Enterobacter asburiae PDN3 0.63 EX28DRAFT_4532 Uncharacterized enzyme of thiazole biosynthesis 0.51 EX28DRAFT_0167 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent low > 76
Bacteroides thetaiotaomicron VPI-5482 0.63 BT0651 thiamine biosynthesis protein ThiG (NCBI ptt file) 0.25 BT3360 phosphoribosylglycinamide formyltransferase (NCBI ptt file) low > 81
Escherichia coli BL21 0.63 ECD_03867 thiamine biosynthesis ThiGH complex subunit 0.55 ECD_02392 phosphoribosylglycinamide formyltransferase 1 0.43 22
Bacteroides ovatus ATCC 8483 0.62 BACOVA_02359 thiazole biosynthesis protein ThiG 0.23 BACOVA_01954 putative phosphoribosylglycinamide formyltransferase low > 96
Escherichia coli ECOR38 0.62 HEPCGN_12030 thiG thiazole synthase 0.55 HEPCGN_20970 purN phosphoribosylglycinamide formyltransferase low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.62 Echvi_3564 Uncharacterized enzyme of thiazole biosynthesis 0.24 Echvi_1470 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Escherichia coli Nissle 1917 0.62 ECOLIN_RS23020 thiazole synthase 0.55 ECOLIN_RS14195 phosphoribosylglycinamide formyltransferase 0.40 14
Escherichia fergusonii Becca 0.62 EFB2_04621 Thiazole synthase 0.55 EFB2_01398 Phosphoribosylglycinamide formyltransferase low > 86
Vibrio cholerae E7946 ATCC 55056 0.62 CSW01_00355 thiazole synthase 0.59 CSW01_11355 phosphoribosylglycinamide formyltransferase low > 62
Phocaeicola vulgatus CL09T03C04 0.62 HMPREF1058_RS03285 thiazole synthase 0.24 HMPREF1058_RS10780 phosphoribosylglycinamide formyltransferase low > 67
Phocaeicola dorei CL03T12C01 0.61 ABI39_RS17755 thiazole synthase 0.24 ABI39_RS06315 phosphoribosylglycinamide formyltransferase low > 72
Bacteroides stercoris CC31F 0.61 HMPREF1181_RS14680 thiazole synthase 0.23 HMPREF1181_RS02435 phosphoribosylglycinamide formyltransferase low > 56
Alteromonas macleodii MIT1002 0.61 MIT1002_00093 Thiazole synthase 0.56 MIT1002_02220 Phosphoribosylglycinamide formyltransferase low > 70
Synechocystis sp000284455 PCC 6803 0.46 SGL_RS19985 thiazole synthase 0.27 SGL_RS14055 phosphoribosylglycinamide formyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.45 DVU2094 thiG thiG protein (TIGR) 0.34 DVU0736 purN phosphoribosylglycinamide formyltransferase (TIGR) low > 55
Synechococcus elongatus PCC 7942 0.45 Synpcc7942_0576 thiG thiazole synthase 0.30 Synpcc7942_0958 purN phosphoribosylglycinamide formyltransferase — —
Desulfovibrio vulgaris Miyazaki F 0.43 DvMF_0800 thiG thiazole synthase (RefSeq) 0.30 DvMF_2769 phosphoribosylglycinamide formyltransferase (RefSeq) low > 51
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_0291 thiazole-phosphate synthase 0.50 B158DRAFT_2384 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Azospirillum sp. SherDot2 0.41 MPMX19_00262 Thiazole synthase 0.36 MPMX19_01305 Phosphoribosylglycinamide formyltransferase — —
Xanthobacter sp. DMC5 0.41 GFF2432 Thiazole synthase 0.36 GFF1753 Phosphoribosylglycinamide formyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS11645 thiazole synthase 0.36 ABZR86_RS19860 phosphoribosylglycinamide formyltransferase — —
Mycobacterium tuberculosis H37Rv 0.39 Rv0417 Probable thiamin biosynthesis protein ThiG (thiazole biosynthesis protein) 0.22 Rv0956 Probable 5'-phosphoribosylglycinamide formyltransferase PurN (GART) (gar transformylase) (5'-phosphoribosylglycinamide transformylase) — —
Lysobacter sp. OAE881 0.39 ABIE51_RS16545 thiazole synthase 0.38 ABIE51_RS15895 phosphoribosylglycinamide formyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.1284.1 Thiazole biosynthesis protein ThiG 0.40 Xcc-8004.1673.1 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 74
Dechlorosoma suillum PS 0.39 Dsui_1014 putative enzyme of thiazole biosynthesis 0.43 Dsui_1545 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Rhodopseudomonas palustris CGA009 0.39 TX73_018530 thiazole synthase 0.38 TX73_015790 phosphoribosylglycinamide formyltransferase — —
Castellaniella sp019104865 MT123 0.39 ABCV34_RS14510 thiazole synthase 0.39 ABCV34_RS05225 phosphoribosylglycinamide formyltransferase — —
Marinobacter adhaerens HP15 0.38 HP15_3274 thiazole synthase 0.49 HP15_1298 phosphoribosylglycinamide formyltransferase — —
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_11895 thiS thiazole synthase 0.33 OKGIIK_02310 purN phosphoribosylglycinamide formyltransferase low > 53
Variovorax sp. OAS795 0.38 ABID97_RS15315 thiazole synthase 0.39 ABID97_RS07775 phosphoribosylglycinamide formyltransferase low > 91
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS02130 thiazole synthase 0.45 HSERO_RS05910 phosphoribosylglycinamide formyltransferase low > 78
Pseudomonas segetis P6 0.38 MPMX49_03598 Thiazole synthase 0.56 MPMX49_01660 Phosphoribosylglycinamide formyltransferase — —
Pseudomonas sp. S08-1 0.38 OH686_14285 Thiazole synthase 0.52 OH686_18990 phosphoribosylglycinamide formyltransferase low > 80
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_1000 Thiazole biosynthesis protein ThiG 0.52 PfGW456L13_4253 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 87
Azospirillum brasilense Sp245 0.37 AZOBR_RS30960 thiazole synthase 0.39 AZOBR_RS16295 phosphoribosylglycinamide formyltransferase — —
Pseudomonas sp. DMC3 0.37 GFF219 Thiazole synthase 0.54 GFF2538 Phosphoribosylglycinamide formyltransferase low > 89
Pseudomonas aeruginosa PA14 0.37 IKLFDK_23520 Thiazole synthase 0.51 IKLFDK_04255 phosphoribosylglycinamide formyltransferase low > 100
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_4740 thiazole-phosphate synthase 0.49 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase low > 86
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_08215 thiazole synthase 0.53 AO353_02685 phosphoribosylglycinamide formyltransferase low > 101
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_4740 thiazole-phosphate synthase 0.49 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase low > 86
Pseudomonas sp. SVBP6 0.37 COO64_RS12950 thiazole synthase 0.51 COO64_RS07300 purN phosphoribosylglycinamide formyltransferase 0.69 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF246 Thiazole biosynthesis protein ThiG 0.38 GFF767 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Acinetobacter baumannii LAC-4 0.37 RR41_RS06275 thiazole synthase 0.45 RR41_RS04590 phosphoribosylglycinamide formyltransferase low > 55
Pseudomonas sp. RS175 0.37 PFR28_04252 Thiazole synthase 0.52 PFR28_03218 Phosphoribosylglycinamide formyltransferase low > 88
Pseudomonas stutzeri RCH2 0.37 Psest_0267 Uncharacterized enzyme of thiazole biosynthesis 0.51 Psest_1473 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent low > 67
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_01957 thiazole biosynthesis protein ThiG 0.35 CCNA_01774 phosphoribosylglycinamide formyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS28420 thiazole synthase 0.55 PFLU_RS22070 phosphoribosylglycinamide formyltransferase low > 109
Pseudomonas fluorescens SBW25 0.37 PFLU_RS28420 thiazole synthase 0.55 PFLU_RS22070 phosphoribosylglycinamide formyltransferase low > 109
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_4590 Thiazole biosynthesis protein ThiG 0.52 Pf6N2E2_5728 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 103
Caulobacter crescentus NA1000 0.37 CCNA_01957 thiazole biosynthesis protein ThiG 0.35 CCNA_01774 phosphoribosylglycinamide formyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_13375 thiazole synthase 0.52 AO356_19085 phosphoribosylglycinamide formyltransferase low > 104
Pseudomonas putida KT2440 0.37 PP_5104 thiazole synthase 0.53 PP_1664 phosphoribosylglycinamide formyltransferase 1 low > 96
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_2331 Thiazole biosynthesis protein ThiG 0.54 Pf1N1B4_3697 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 87
Pseudomonas lactucae CFBP13502 0.36 GEMAOFIL_05492 Thiazole synthase 0.54 GEMAOFIL_04218 Phosphoribosylglycinamide formyltransferase low > 93
Pantoea agglomerans CFBP13505 P0401 0.36 PagCFBP13505_RS14285 thiazole synthase 0.53 PagCFBP13505_RS15065 phosphoribosylglycinamide formyltransferase low > 74
Pseudomonas simiae WCS417 0.36 PS417_26775 thiazole synthase 0.56 PS417_20125 phosphoribosylglycinamide formyltransferase low > 88
Rhodanobacter sp000427505 FW510-R12 0.36 LRK53_RS03810 thiazole synthase 0.35 LRK53_RS15660 phosphoribosylglycinamide formyltransferase low > 59
Acinetobacter radioresistens SK82 0.36 MPMX26_01107 Thiazole synthase 0.40 MPMX26_02207 Phosphoribosylglycinamide formyltransferase low > 36
Paraburkholderia graminis OAS925 0.36 ABIE53_003714 thiazole synthase 0.44 ABIE53_003298 phosphoribosylglycinamide formyltransferase-1 — —
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_05639 thiazole-phosphate synthase 0.40 H281DRAFT_04075 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase — —
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS17775 thiazole synthase 0.45 BPHYT_RS15670 phosphoribosylglycinamide formyltransferase — —
Erwinia amylovora T8 0.36 OLJFJH_00240 Thiazole synthase 0.50 OLJFJH_10585 phosphoribosylglycinamide formyltransferase — —
Variovorax sp. SCN45 0.36 GFF1188 Thiazole synthase (EC 2.8.1.10) 0.38 GFF6047 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.70 108
Pseudomonas sp. BP01 0.36 JOY50_RS20860 thiazole synthase 0.53 JOY50_RS23935 purN phosphoribosylglycinamide formyltransferase low > 84
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS27930 thiazole synthase 0.45 QEN71_RS03040 phosphoribosylglycinamide formyltransferase — —
Pantoea sp. MT58 0.35 IAI47_20700 thiazole synthase 0.52 IAI47_05175 phosphoribosylglycinamide formyltransferase low > 76
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS01305 thiazole synthase 0.42 RR42_RS17050 phosphoribosylglycinamide formyltransferase — —
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS04800 thiazole synthase 0.43 ABZR87_RS00380 phosphoribosylglycinamide formyltransferase — —
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS09925 thiazole synthase 0.43 RALBFv3_RS04760 phosphoribosylglycinamide formyltransferase — —
Ralstonia solanacearum UW163 0.35 UW163_RS03655 thiazole synthase 0.43 UW163_RS08910 phosphoribosylglycinamide formyltransferase — —
Agrobacterium fabrum C58 0.35 Atu2566 thiamin biosynthesis ThiG 0.36 Atu1140 phosphoribosyalaminoimidazole-succinocarboxamide synthase low > 89
Ralstonia solanacearum PSI07 0.34 RPSI07_RS23435 thiazole synthase 0.42 RPSI07_RS12625 phosphoribosylglycinamide formyltransferase — —
Ralstonia solanacearum GMI1000 0.34 RS_RS00535 thiazole synthase 0.44 RS_RS12320 phosphoribosylglycinamide formyltransferase — —
Acidovorax sp. GW101-3H11 0.34 Ac3H11_1059 Thiazole biosynthesis protein ThiG 0.42 Ac3H11_1709 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Phaeobacter inhibens DSM 17395 0.33 PGA1_c09070 thiazole biosynthesis protein ThiG 0.36 PGA1_c13270 phosphoribosylglycinamide formyltransferase PurN low > 62
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS07975 thiazole synthase 0.31 A4249_RS08220 phosphoribosylglycinamide formyltransferase — —
Sinorhizobium meliloti 1021 0.31 SM_b20617 thiazole synthase 0.37 SMc00614 phosphoribosylglycinamide formyltransferase — —
Dinoroseobacter shibae DFL-12 0.31 Dshi_0912 thiazole biosynthesis family protein (RefSeq) 0.39 Dshi_1888 phosphoribosylglycinamide formyltransferase (RefSeq) low > 64

Not shown: 4 genomes with orthologs for SO2441 only; 7 genomes with orthologs for SO2761 only