Conservation of cofitness between SO2761 and SO2592 in Shewanella oneidensis MR-1

108 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO2761 purN phosphoribosylglycinamide formyltransferase (NCBI ptt file) 1.0 SO2592 pyrD dihydroorotate dehydrogenase (NCBI ptt file) 0.73 15
Shewanella sp. ANA-3 0.95 Shewana3_2546 purN phosphoribosylglycinamide formyltransferase (RefSeq) 0.96 Shewana3_1786 dihydroorotate dehydrogenase 2 (RefSeq) 0.76 39
Shewanella loihica PV-4 0.80 Shew_1512 phosphoribosylglycinamide formyltransferase (RefSeq) 0.83 Shew_1810 dihydroorotate dehydrogenase 2 (RefSeq) low > 60
Shewanella amazonensis SB2B 0.78 Sama_2098 purN phosphoribosylglycinamide formyltransferase (RefSeq) 0.83 Sama_1593 dihydroorotate dehydrogenase 2 (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_11355 phosphoribosylglycinamide formyltransferase 0.62 CSW01_07490 dihydroorotate dehydrogenase (quinone) low > 62
Alteromonas macleodii MIT1002 0.56 MIT1002_02220 Phosphoribosylglycinamide formyltransferase 0.56 MIT1002_02035 Dihydroorotate dehydrogenase (quinone) low > 70
Pseudomonas segetis P6 0.56 ACVTMO_RS08225 purN phosphoribosylglycinamide formyltransferase 0.55 ACVTMO_RS14995 quinone-dependent dihydroorotate dehydrogenase
Pseudomonas simiae WCS417 0.56 PS417_20125 phosphoribosylglycinamide formyltransferase 0.56 PS417_20935 dihydroorotate dehydrogenase
Escherichia coli ECOR27 0.55 NOLOHH_13455 purN phosphoribosylglycinamide formyltransferase 0.62 NOLOHH_21850 pyrD quinone-dependent dihydroorotate dehydrogenase 0.70 29
Escherichia coli ECRC62 0.55 BNILDI_12265 purN phosphoribosylglycinamide formyltransferase 0.62 BNILDI_20015 pyrD quinone-dependent dihydroorotate dehydrogenase 0.83 12
Escherichia coli ECRC99 0.55 KEDOAH_06415 purN phosphoribosylglycinamide formyltransferase 0.62 KEDOAH_22440 pyrD quinone-dependent dihydroorotate dehydrogenase
Escherichia coli BL21 0.55 ECD_02392 phosphoribosylglycinamide formyltransferase 1 0.62 ECD_00949 dihydro-orotate oxidase, FMN-linked 0.48 17
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_01226 Phosphoribosylglycinamide formyltransferase 0.62 OHPLBJKB_02721 Dihydroorotate dehydrogenase (quinone) low > 74
Escherichia fergusonii Becca 0.55 EFB2_01398 Phosphoribosylglycinamide formyltransferase 0.62 EFB2_03126 Dihydroorotate dehydrogenase (quinone) low > 86
Escherichia coli ECOR38 0.55 HEPCGN_20970 purN phosphoribosylglycinamide formyltransferase 0.62 HEPCGN_23225 pyrD quinone-dependent dihydroorotate dehydrogenase 0.58 35
Escherichia coli BW25113 0.55 b2500 purN phosphoribosylglycinamide formyltransferase (NCBI) 0.62 b0945 pyrD dihydroorotate dehydrogenase (NCBI) 0.76 2
Escherichia coli Nissle 1917 0.55 ECOLIN_RS14195 phosphoribosylglycinamide formyltransferase 0.62 ECOLIN_RS04965 quinone-dependent dihydroorotate dehydrogenase
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS22070 phosphoribosylglycinamide formyltransferase 0.56 PFLU_RS22550 quinone-dependent dihydroorotate dehydrogenase
Escherichia coli ECRC98 0.55 JDDGAC_25750 purN phosphoribosylglycinamide formyltransferase 0.62 JDDGAC_08905 pyrD quinone-dependent dihydroorotate dehydrogenase low > 87
Pseudomonas fluorescens SBW25 0.55 PFLU_RS22070 phosphoribosylglycinamide formyltransferase 0.56 PFLU_RS22550 quinone-dependent dihydroorotate dehydrogenase
Escherichia coli ECRC102 0.55 NIAGMN_19575 purN phosphoribosylglycinamide formyltransferase 0.62 NIAGMN_03015 pyrD quinone-dependent dihydroorotate dehydrogenase low > 80
Escherichia coli ECRC100 0.55 OKFHMN_21805 purN phosphoribosylglycinamide formyltransferase 0.62 OKFHMN_05295 pyrD quinone-dependent dihydroorotate dehydrogenase low > 79
Escherichia coli ECRC101 0.55 MCAODC_12335 purN phosphoribosylglycinamide formyltransferase 0.62 MCAODC_24685 pyrD quinone-dependent dihydroorotate dehydrogenase low > 87
Pseudomonas lactucae CFBP13502 0.54 GEMAOFIL_04218 Phosphoribosylglycinamide formyltransferase 0.56 GEMAOFIL_04332 Dihydroorotate dehydrogenase (quinone)
Rahnella sp. WP5 0.54 EX31_RS22690 phosphoribosylglycinamide formyltransferase 0.60 EX31_RS18095 quinone-dependent dihydroorotate dehydrogenase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF2168 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.62 GFF3236 Dihydroorotate dehydrogenase (EC 1.3.3.1) low > 78
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_3697 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.55 Pf1N1B4_3842 Dihydroorotate dehydrogenase (EC 1.3.3.1)
Pseudomonas sp. DMC3 0.54 GFF2538 Phosphoribosylglycinamide formyltransferase 0.56 GFF5252 Dihydroorotate dehydrogenase (quinone)
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_02685 phosphoribosylglycinamide formyltransferase 0.55 AO353_00780 dihydroorotate dehydrogenase (quinone)
Pseudomonas putida KT2440 0.53 PP_1664 phosphoribosylglycinamide formyltransferase 1 0.54 PP_2095 Dihydroorotate dehydrogenase (quinone)
Pseudomonas orientalis W4I3 0.53 QF045_RS22220 phosphoribosylglycinamide formyltransferase 0.56 QF045_RS22745 quinone-dependent dihydroorotate dehydrogenase
Pseudomonas sp. BP01 0.53 JOY50_RS23935 purN phosphoribosylglycinamide formyltransferase 0.55 JOY50_RS22105 quinone-dependent dihydroorotate dehydrogenase
Pantoea agglomerans CFBP13505 P0401 0.53 PagCFBP13505_RS15065 phosphoribosylglycinamide formyltransferase 0.64 PagCFBP13505_RS04625 quinone-dependent dihydroorotate dehydrogenase low > 74
Dickeya dianthicola ME23 0.53 DZA65_RS06415 phosphoribosylglycinamide formyltransferase 0.62 DZA65_RS13390 quinone-dependent dihydroorotate dehydrogenase low > 75
Pantoea sp. MT58 0.52 IAI47_05175 phosphoribosylglycinamide formyltransferase 0.64 IAI47_12705 quinone-dependent dihydroorotate dehydrogenase 0.65 7
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_4253 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.55 PfGW456L13_4095 Dihydroorotate dehydrogenase (EC 1.3.3.1)
Dickeya dadantii 3937 0.52 DDA3937_RS06020 phosphoribosylglycinamide formyltransferase 0.63 DDA3937_RS12855 quinone-dependent dihydroorotate dehydrogenase 0.60 40
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_19085 phosphoribosylglycinamide formyltransferase 0.56 AO356_02610 dihydroorotate dehydrogenase (quinone)
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_5728 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.56 Pf6N2E2_2347 Dihydroorotate dehydrogenase (EC 1.3.3.1)
Dickeya dianthicola 67-19 0.52 HGI48_RS06065 phosphoribosylglycinamide formyltransferase 0.62 HGI48_RS12925 quinone-dependent dihydroorotate dehydrogenase low > 71
Enterobacter sp. TBS_079 0.52 MPMX20_03355 Phosphoribosylglycinamide formyltransferase 0.62 MPMX20_01596 Dihydroorotate dehydrogenase (quinone) 0.40 24
Pseudomonas aeruginosa PUPa3 0.52 DQ20_RS45075 purN;go_function=phosphoribosylglycinamide phosphoribosylglycinamide formyltransferase 0.54 DQ20_RS33870 quinone-dependent dihydroorotate dehydrogenase
Pseudomonas aeruginosa MRSN321 0.52 DY961_RS07720 purN;go_function=phosphoribosylglycinamide phosphoribosylglycinamide formyltransferase 0.54 DY961_RS01695 quinone-dependent dihydroorotate dehydrogenase low > 100
Pseudomonas sp. S08-1 0.52 OH686_18990 phosphoribosylglycinamide formyltransferase 0.55 OH686_03120 dihydroorotate dehydrogenase (fumarate)
Pseudomonas sp. RS175 0.52 PFR28_03218 Phosphoribosylglycinamide formyltransferase 0.55 PFR28_01054 Dihydroorotate dehydrogenase (quinone)
Pseudomonas aeruginosa PA14 0.51 IKLFDK_04255 phosphoribosylglycinamide formyltransferase 0.54 IKLFDK_15515 quinone-dependent dihydroorotate dehydrogenase
Enterobacter asburiae PDN3 0.51 EX28DRAFT_0167 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.62 EX28DRAFT_1998 dihydroorotate oxidase A (EC 1.3.3.1)
Pseudomonas sp. SVBP6 0.51 COO64_RS07300 purN phosphoribosylglycinamide formyltransferase 0.53 COO64_RS05305 quinone-dependent dihydroorotate dehydrogenase
Erwinia tracheiphila HP pepo 2.2 0.51 IJEDHG_18360 purN phosphoribosylglycinamide formyltransferase 0.60 IJEDHG_20465 pyrD quinone-dependent dihydroorotate dehydrogenase low > 61
Erwinia tracheiphila SCR3 0.51 LU632_RS08270 purN phosphoribosylglycinamide formyltransferase 0.60 LU632_RS09955 pyrD quinone-dependent dihydroorotate dehydrogenase low > 73
Serratia liquefaciens MT49 0.51 IAI46_18890 phosphoribosylglycinamide formyltransferase 0.62 IAI46_08805 quinone-dependent dihydroorotate dehydrogenase 0.79 16
Pseudomonas stutzeri RCH2 0.51 Psest_1473 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.55 Psest_1947 dihydroorotate dehydrogenase, subfamily 2 low > 67
Pectobacterium carotovorum WPP14 0.50 HER17_RS15470 phosphoribosylglycinamide formyltransferase 0.63 HER17_RS12005 quinone-dependent dihydroorotate dehydrogenase low > 75
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_2384 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.52 B158DRAFT_2228 dihydroorotate oxidase A (EC 1.3.3.1)
Klebsiella michiganensis M5al 0.50 BWI76_RS20970 phosphoribosylglycinamide formyltransferase 0.63 BWI76_RS09910 dihydroorotate dehydrogenase (quinone) 0.36 21
Erwinia amylovora T8 0.50 OLJFJH_10585 phosphoribosylglycinamide formyltransferase 0.62 OLJFJH_15990 quinone-dependent dihydroorotate dehydrogenase low > 58
Klebsiella pneumoniae MKP103 0.50 KDGMDA_27810 phosphoribosylglycinamide formyltransferase 0.62 KDGMDA_18145 quinone-dependent dihydroorotate dehydrogenase low > 95
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase 0.56 Psyr_2106 dihydroorotate oxidase A
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase 0.56 Psyr_2106 dihydroorotate oxidase A
Marinobacter adhaerens HP15 0.49 HP15_1298 phosphoribosylglycinamide formyltransferase 0.47 HP15_1377 dihydroorotate dehydrogenase low > 73
Acinetobacter baumannii LAC-4 0.45 RR41_RS04590 phosphoribosylglycinamide formyltransferase 0.54 RR41_RS06340 quinone-dependent dihydroorotate dehydrogenase
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS15670 phosphoribosylglycinamide formyltransferase 0.54 BPHYT_RS08565 dihydroorotate dehydrogenase 0.51 75
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS05910 phosphoribosylglycinamide formyltransferase 0.56 HSERO_RS16155 dihydroorotate dehydrogenase
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS03040 phosphoribosylglycinamide formyltransferase 0.54 QEN71_RS22765 quinone-dependent dihydroorotate dehydrogenase
Paraburkholderia graminis OAS925 0.44 ABIE53_003298 phosphoribosylglycinamide formyltransferase-1 0.54 ABIE53_001954 dihydroorotate dehydrogenase
Ralstonia solanacearum GMI1000 0.44 RS_RS12320 phosphoribosylglycinamide formyltransferase 0.53 RS_RS08160 dihydroorotate dehydrogenase (quinone)
Dechlorosoma suillum PS 0.43 Dsui_1545 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.57 Dsui_2978 dihydroorotate dehydrogenase, subfamily 2
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS00380 phosphoribosylglycinamide formyltransferase 0.53 ABZR87_RS13360 quinone-dependent dihydroorotate dehydrogenase
Ralstonia solanacearum UW163 0.43 UW163_RS08910 phosphoribosylglycinamide formyltransferase 0.55 UW163_RS14880 quinone-dependent dihydroorotate dehydrogenase
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS04760 phosphoribosylglycinamide formyltransferase 0.55 RALBFv3_RS01570 quinone-dependent dihydroorotate dehydrogenase
Ralstonia solanacearum PSI07 0.42 RPSI07_RS12625 phosphoribosylglycinamide formyltransferase 0.53 RPSI07_RS15920 quinone-dependent dihydroorotate dehydrogenase
Acidovorax sp. GW101-3H11 0.42 Ac3H11_1709 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.49 Ac3H11_4100 Dihydroorotate dehydrogenase (EC 1.3.3.1)
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS17050 phosphoribosylglycinamide formyltransferase 0.52 RR42_RS07465 dihydroorotate dehydrogenase
Rhodospirillum rubrum S1H 0.40 Rru_A2168 Phosphoribosylglycinamide formyltransferase (NCBI) 0.38 Rru_A0514 Dihydroorotate dehydrogenase 2 (NCBI)
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_04075 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase 0.53 H281DRAFT_00743 dihydroorotate oxidase A
Acinetobacter radioresistens SK82 0.40 MPMX26_02207 Phosphoribosylglycinamide formyltransferase 0.54 MPMX26_01120 Dihydroorotate dehydrogenase (quinone) 0.60 30
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.1673.1 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.47 Xcc-8004.3032.1 Dihydroorotate dehydrogenase (EC 1.3.3.1)
Rhizobium sp. OAE497 0.39 ABIE40_RS06555 phosphoribosylglycinamide formyltransferase 0.38 ABIE40_RS02420 quinone-dependent dihydroorotate dehydrogenase
Castellaniella sp019104865 MT123 0.39 ABCV34_RS05225 phosphoribosylglycinamide formyltransferase 0.48 ABCV34_RS07790 quinone-dependent dihydroorotate dehydrogenase
Magnetospirillum magneticum AMB-1 0.39 AMB_RS14335 phosphoribosylglycinamide formyltransferase 0.39 AMB_RS19685 quinone-dependent dihydroorotate dehydrogenase
Azospirillum brasilense Sp245 0.39 AZOBR_RS16295 phosphoribosylglycinamide formyltransferase 0.38 AZOBR_RS13520 dihydroorotate dehydrogenase low > 97
Dinoroseobacter shibae DFL-12 0.39 Dshi_1888 phosphoribosylglycinamide formyltransferase (RefSeq) 0.35 Dshi_0847 Dihydroorotate oxidase (RefSeq) 0.78 15
Variovorax sp. OAS795 0.39 ABID97_RS07775 phosphoribosylglycinamide formyltransferase 0.50 ABID97_RS14065 quinone-dependent dihydroorotate dehydrogenase
Lysobacter sp. OAE881 0.38 ABIE51_RS15895 phosphoribosylglycinamide formyltransferase 0.47 ABIE51_RS13725 quinone-dependent dihydroorotate dehydrogenase
Rhodopseudomonas palustris CGA009 0.38 TX73_015790 phosphoribosylglycinamide formyltransferase 0.37 TX73_004110 quinone-dependent dihydroorotate dehydrogenase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF767 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.50 GFF4211 Dihydroorotate dehydrogenase (EC 1.3.3.1) low > 90
Variovorax sp. SCN45 0.38 GFF6047 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.50 GFF960 Dihydroorotate dehydrogenase (quinone) (EC 1.3.5.2)
Sinorhizobium meliloti 1021 0.37 SMc00614 phosphoribosylglycinamide formyltransferase 0.40 SMc02245 dihydroorotate dehydrogenase 2 0.89 41
Phaeobacter inhibens DSM 17395 0.36 PGA1_c13270 phosphoribosylglycinamide formyltransferase PurN 0.37 PGA1_c12150 dihydroorotate dehydrogenase PyrD 0.82 19
Azospirillum sp. SherDot2 0.36 MPMX19_01305 Phosphoribosylglycinamide formyltransferase 0.39 MPMX19_02083 Dihydroorotate dehydrogenase (quinone)
Xanthobacter sp. DMC5 0.36 GFF1753 Phosphoribosylglycinamide formyltransferase 0.35 GFF4317 Dihydroorotate dehydrogenase (quinone)
Agrobacterium fabrum C58 0.36 Atu1140 phosphoribosyalaminoimidazole-succinocarboxamide synthase 0.40 Atu0486 dihydroorotate dehydrogenase 0.88 19
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS19860 phosphoribosylglycinamide formyltransferase 0.47 ABZR86_RS07450 quinone-dependent dihydroorotate dehydrogenase
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_01774 phosphoribosylglycinamide formyltransferase 0.33 CCNA_00562 dihydroorotate dehydrogenase low > 67
Caulobacter crescentus NA1000 0.35 CCNA_01774 phosphoribosylglycinamide formyltransferase 0.33 CCNA_00562 dihydroorotate dehydrogenase 0.75 19
Rhodanobacter sp000427505 FW510-R12 0.35 LRK53_RS15660 phosphoribosylglycinamide formyltransferase 0.47 LRK53_RS12795 quinone-dependent dihydroorotate dehydrogenase
Rhodanobacter denitrificans MT42 0.34 LRK55_RS12640 phosphoribosylglycinamide formyltransferase 0.48 LRK55_RS15740 quinone-dependent dihydroorotate dehydrogenase
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS12940 phosphoribosylglycinamide formyltransferase 0.48 LRK54_RS15985 quinone-dependent dihydroorotate dehydrogenase
Sphingomonas koreensis DSMZ 15582 0.33 Ga0059261_0229 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.40 Ga0059261_1468 dihydroorotate oxidase A (EC 1.3.3.1)
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_02310 purN phosphoribosylglycinamide formyltransferase 0.48 OKGIIK_09010 pyrD quinone-dependent dihydroorotate dehydrogenase
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS08220 phosphoribosylglycinamide formyltransferase 0.39 A4249_RS00280 quinone-dependent dihydroorotate dehydrogenase
Synechocystis sp000284455 PCC 6803 0.27 SGL_RS14055 phosphoribosylglycinamide formyltransferase 0.34 SGL_RS17005 quinone-dependent dihydroorotate dehydrogenase
Pontibacter actiniarum KMM 6156, DSM 19842 0.27 CA264_18635 phosphoribosylglycinamide formyltransferase 0.44 CA264_00865 dihydroorotate dehydrogenase (quinone) low > 74
Bacteroides thetaiotaomicron VPI-5482 0.25 BT3360 phosphoribosylglycinamide formyltransferase (NCBI ptt file) 0.23 BT1009 dihydroorotate dehydrogenase (NCBI ptt file) low > 81
Mucilaginibacter yixingensis YX-36 DSM 26809 0.25 ABZR88_RS01870 phosphoribosylglycinamide formyltransferase 0.41 ABZR88_RS12040 quinone-dependent dihydroorotate dehydrogenase
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS02710 phosphoribosylglycinamide formyltransferase 0.43 CA265_RS14005 dihydroorotate dehydrogenase (quinone)
Echinicola vietnamensis KMM 6221, DSM 17526 0.24 Echvi_1470 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.41 Echvi_1806 dihydroorotate dehydrogenase, subfamily 2
Cellulophaga baltica 18 0.24 M666_RS04095 phosphoribosylglycinamide formyltransferase 0.41 M666_RS19110 quinone-dependent dihydroorotate dehydrogenase low > 67
Mycobacterium tuberculosis H37Rv 0.22 Rv0956 Probable 5'-phosphoribosylglycinamide formyltransferase PurN (GART) (gar transformylase) (5'-phosphoribosylglycinamide transformylase) 0.36 Rv2139 Probable dihydroorotate dehydrogenase PyrD

Not shown: 8 genomes with orthologs for SO2761 only; 6 genomes with orthologs for SO2592 only