Conservation of cofitness between b1095 and b3164 in Escherichia coli BW25113

98 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1095 fabF 3-oxoacyl-(acyl carrier protein) synthase (NCBI) 1.0 b3164 pnp polynucleotide phosphorylase/polyadenylase (RefSeq) 0.36 6
Escherichia coli Nissle 1917 1.00 ECOLIN_RS06325 beta-ketoacyl-ACP synthase II 1.00 ECOLIN_RS18175 polyribonucleotide nucleotidyltransferase
Escherichia fergusonii Becca 1.00 EFB2_02880 3-oxoacyl-[acyl-carrier-protein] synthase 2 1.00 EFB2_00659 Polyribonucleotide nucleotidyltransferase low > 86
Escherichia coli BL21 1.00 ECD_01091 3-oxoacyl-[acyl-carrier-protein] synthase II 1.00 ECD_03031 polynucleotide phosphorylase/polyadenylase
Escherichia coli ECRC62 1.00 BNILDI_19255 fabF beta-ketoacyl-ACP synthase II 1.00 BNILDI_01595 pnp polyribonucleotide nucleotidyltransferase
Escherichia coli ECRC99 1.00 KEDOAH_24190 fabF beta-ketoacyl-ACP synthase II 1.00 KEDOAH_10010 pnp polyribonucleotide nucleotidyltransferase
Escherichia coli ECRC101 1.00 OKFHMN_03565 fabF beta-ketoacyl-ACP synthase II 1.00 OKFHMN_18140 pnp polyribonucleotide nucleotidyltransferase
Escherichia coli ECRC101 1.00 MCAODC_22925 fabF beta-ketoacyl-ACP synthase II 1.00 MCAODC_08660 pnp polyribonucleotide nucleotidyltransferase
Escherichia coli ECRC102 1.00 NIAGMN_24265 fabF beta-ketoacyl-ACP synthase II 1.00 NIAGMN_15900 pnp polyribonucleotide nucleotidyltransferase
Escherichia coli ECRC98 1.00 JDDGAC_07225 fabF beta-ketoacyl-ACP synthase II 1.00 JDDGAC_21765 pnp polyribonucleotide nucleotidyltransferase
Escherichia coli ECOR27 1.00 NOLOHH_21095 fabF beta-ketoacyl-ACP synthase II 1.00 NOLOHH_09940 pnp polyribonucleotide nucleotidyltransferase
Escherichia coli ECOR38 1.00 HEPCGN_23915 fabF beta-ketoacyl-ACP synthase II 1.00 HEPCGN_17015 pnp polyribonucleotide nucleotidyltransferase
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02571 3-oxoacyl-[acyl-carrier-protein] synthase 2 1.00 OHPLBJKB_00536 Polyribonucleotide nucleotidyltransferase low > 73
Enterobacter asburiae PDN3 0.93 EX28DRAFT_1834 beta-ketoacyl-acyl-carrier-protein synthase II 0.95 EX28DRAFT_3213 polyribonucleotide nucleotidyltransferase
Klebsiella michiganensis M5al 0.93 BWI76_RS11100 beta-ketoacyl-[acyl-carrier-protein] synthase II 0.94 BWI76_RS25065 polyribonucleotide nucleotidyltransferase low > 92
Enterobacter sp. TBS_079 0.90 MPMX20_01775 3-oxoacyl-[acyl-carrier-protein] synthase 2 0.95 MPMX20_04068 Polyribonucleotide nucleotidyltransferase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF3377 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41) 0.96 GFF1502 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) low > 78
Pectobacterium carotovorum WPP14 0.89 HER17_RS08660 beta-ketoacyl-ACP synthase II 0.88 HER17_RS18190 polyribonucleotide nucleotidyltransferase
Pantoea sp. MT58 0.88 IAI47_12060 beta-ketoacyl-ACP synthase II 0.90 IAI47_17005 polyribonucleotide nucleotidyltransferase low > 76
Rahnella sp. WP5 0.88 EX31_RS24445 beta-ketoacyl-ACP synthase II 0.89 EX31_RS08520 polyribonucleotide nucleotidyltransferase low > 89
Serratia liquefaciens MT49 0.88 IAI46_09800 beta-ketoacyl-ACP synthase II 0.89 IAI46_01955 polyribonucleotide nucleotidyltransferase low > 86
Dickeya dianthicola ME23 0.86 DZA65_RS13645 beta-ketoacyl-ACP synthase II 0.89 DZA65_RS03255 polyribonucleotide nucleotidyltransferase low > 75
Dickeya dadantii 3937 0.86 DDA3937_RS13110 beta-ketoacyl-ACP synthase II 0.89 DDA3937_RS03090 polyribonucleotide nucleotidyltransferase low > 74
Dickeya dianthicola 67-19 0.85 HGI48_RS13175 beta-ketoacyl-ACP synthase II 0.88 HGI48_RS03260 polyribonucleotide nucleotidyltransferase low > 71
Erwinia tracheiphila SCR3 0.84 LU632_RS14810 fabF beta-ketoacyl-ACP synthase II 0.91 LU632_RS21040 pnp polyribonucleotide nucleotidyltransferase
Vibrio cholerae E7946 ATCC 55056 0.78 CSW01_10085 beta-ketoacyl-[acyl-carrier-protein] synthase II 0.77 CSW01_03410 polyribonucleotide nucleotidyltransferase low > 62
Shewanella amazonensis SB2B 0.78 Sama_1978 3-oxoacyl-(acyl-carrier-protein) synthase II (RefSeq) 0.73 Sama_0966 polynucleotide phosphorylase/polyadenylase (RefSeq)
Shewanella loihica PV-4 0.75 Shew_1605 beta-ketoacyl synthase (RefSeq) 0.73 Shew_2822 polynucleotide phosphorylase/polyadenylase (RefSeq)
Shewanella sp. ANA-3 0.75 Shewana3_2557 3-oxoacyl-[acyl-carrier-protein] synthase II (RefSeq) 0.72 Shewana3_1035 polynucleotide phosphorylase/polyadenylase (RefSeq)
Shewanella oneidensis MR-1 0.74 SO2774 fabF-1 3-oxoacyl-(acyl-carrier-protein) synthase II (NCBI ptt file) 0.71 SO1209 pnp polyribonucleotide nucleotidyltransferase (NCBI ptt file)
Kangiella aquimarina DSM 16071 0.72 B158DRAFT_1751 beta-ketoacyl-acyl-carrier-protein synthase II 0.66 B158DRAFT_0104 polyribonucleotide nucleotidyltransferase
Alteromonas macleodii MIT1002 0.71 MIT1002_01735 3-oxoacyl-[acyl-carrier-protein] synthase 2 0.71 MIT1002_01888 Polyribonucleotide nucleotidyltransferase
Pseudomonas sp. S08-1 0.70 OH686_22150 beta-ketoacyl-acyl-carrier-protein synthase II 0.62 OH686_17165 polyribonucleotide nucleotidyltransferase low > 80
Pseudomonas putida KT2440 0.68 PP_1916 beta-ketoacyl-ACP synthase II / 3-oxo-cis-vaccenoyl-[acp] synthase / FabF / KASII / acetoacetyl-[acp] synthase 0.62 PP_4708 Polyribonucleotide nucleotidyltransferase
Pseudomonas stutzeri RCH2 0.68 Psest_1690 beta-ketoacyl-acyl-carrier-protein synthase II 0.61 Psest_0986 polyribonucleotide nucleotidyltransferase
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS23045 beta-ketoacyl-ACP synthase II 0.59 PFLU_RS25790 polyribonucleotide nucleotidyltransferase 0.33 8
Pseudomonas fluorescens SBW25 0.68 PFLU_RS23045 beta-ketoacyl-ACP synthase II 0.59 PFLU_RS25790 polyribonucleotide nucleotidyltransferase low > 109
Pseudomonas sp. RS175 0.68 PFR28_03008 3-oxoacyl-[acyl-carrier-protein] synthase 2 0.61 PFR28_00094 Polyribonucleotide nucleotidyltransferase
Pseudomonas simiae WCS417 0.68 PS417_21430 3-oxoacyl-ACP synthase 0.59 PS417_23950 polynucleotide phosphorylase/polyadenylase low > 88
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_20175 3-oxoacyl-ACP synthase 0.61 AO356_07390 polyribonucleotide nucleotidyltransferase low > 104
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_01355 3-oxoacyl-ACP synthase 0.61 AO353_05540 polyribonucleotide nucleotidyltransferase
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS06160 beta-ketoacyl-ACP synthase II 0.62 ABZR86_RS06005 polyribonucleotide nucleotidyltransferase
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_5954 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) 0.61 Pf6N2E2_3349 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_2107 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) 0.61 PfGW456L13_5084 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_1649 3-oxoacyl-[acyl-carrier-protein] synthase II 0.62 Psyr_4176 Polyribonucleotide nucleotidyltransferase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_1649 3-oxoacyl-[acyl-carrier-protein] synthase II 0.62 Psyr_4176 Polyribonucleotide nucleotidyltransferase
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_449 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) 0.61 Pf1N1B4_1156 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)
Dechlorosoma suillum PS 0.63 Dsui_2450 beta-ketoacyl-acyl-carrier-protein synthase II 0.66 Dsui_2718 polyribonucleotide nucleotidyltransferase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF3337 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) 0.65 GFF3677 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS04565 beta-ketoacyl-ACP synthase II 0.64 QEN71_RS24175 polyribonucleotide nucleotidyltransferase
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS14090 3-oxoacyl-ACP synthase 0.62 RR42_RS05485 polynucleotide phosphorylase/polyadenylase
Rhodanobacter sp. FW510-T8 0.62 OKGIIK_05725 fabF beta-ketoacyl-ACP synthase II 0.62 OKGIIK_05870 pnp polyribonucleotide nucleotidyltransferase
Rhodanobacter denitrificans MT42 0.62 LRK55_RS00950 beta-ketoacyl-ACP synthase II 0.62 LRK55_RS00800 polyribonucleotide nucleotidyltransferase
Rhodanobacter denitrificans FW104-10B01 0.62 LRK54_RS01175 beta-ketoacyl-ACP synthase II 0.62 LRK54_RS01025 polyribonucleotide nucleotidyltransferase
Ralstonia solanacearum UW163 0.62 UW163_RS11905 beta-ketoacyl-[acyl-carrier-protein] synthase II 0.61 UW163_RS10720 polyribonucleotide nucleotidyltransferase
Ralstonia solanacearum GMI1000 0.62 RS_RS05220 beta-ketoacyl-[acyl-carrier-protein] synthase II 0.62 RS_RS10375 polyribonucleotide nucleotidyltransferase
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS14440 beta-ketoacyl-[acyl-carrier-protein] synthase II 0.61 RALBFv3_RS03005 polyribonucleotide nucleotidyltransferase
Ralstonia solanacearum PSI07 0.62 RPSI07_RS19020 beta-ketoacyl-[acyl-carrier-protein] synthase II 0.61 RPSI07_RS14305 polyribonucleotide nucleotidyltransferase
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS10155 beta-ketoacyl-ACP synthase II 0.61 ABZR87_RS14910 polyribonucleotide nucleotidyltransferase
Herbaspirillum seropedicae SmR1 0.61 HSERO_RS09615 3-oxoacyl-ACP synthase 0.65 HSERO_RS08755 polynucleotide phosphorylase/polyadenylase
Variovorax sp. SCN45 0.61 GFF3861 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) 0.65 GFF4746 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)
Variovorax sp. OAS795 0.61 ABID97_RS08320 beta-ketoacyl-ACP synthase II 0.64 ABID97_RS20520 polyribonucleotide nucleotidyltransferase
Burkholderia phytofirmans PsJN 0.61 BPHYT_RS14415 3-oxoacyl-ACP synthase 0.64 BPHYT_RS06600 polynucleotide phosphorylase/polyadenylase
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_04353 3-oxoacyl-[acyl-carrier-protein] synthase II 0.64 H281DRAFT_04562 polyribonucleotide nucleotidyltransferase
Castellaniella sp019104865 MT123 0.58 ABCV34_RS08360 beta-ketoacyl-ACP synthase II 0.62 ABCV34_RS01240 polyribonucleotide nucleotidyltransferase
Paraburkholderia graminis OAS925 0.58 ABIE53_003045 3-oxoacyl-[acyl-carrier-protein] synthase II 0.64 ABIE53_001586 polyribonucleotide nucleotidyltransferase
Acidovorax sp. GW101-3H11 0.56 Ac3H11_1576 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) 0.64 Ac3H11_1456 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.3993.1 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) 0.62 Xcc-8004.2006.1 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)
Lysobacter sp. OAE881 0.55 ABIE51_RS13935 beta-ketoacyl-ACP synthase II 0.60 ABIE51_RS08415 polyribonucleotide nucleotidyltransferase
Magnetospirillum magneticum AMB-1 0.54 AMB_RS10635 beta-ketoacyl-[acyl-carrier-protein] synthase II 0.55 AMB_RS20820 polyribonucleotide nucleotidyltransferase
Rhodospirillum rubrum S1H 0.54 Rru_A0418 Beta-ketoacyl synthase (NCBI) 0.55 Rru_A3785 3' exoribonuclease (NCBI)
Caulobacter crescentus NA1000 Δfur 0.53 CCNA_01750 3-oxoacyl-(acyl-carrier-protein) synthase II 0.54 CCNA_00033 polyribonucleotide nucleotidyltransferase/polynucleotide adenylyltransferase
Caulobacter crescentus NA1000 0.53 CCNA_01750 3-oxoacyl-(acyl-carrier-protein) synthase II 0.54 CCNA_00033 polyribonucleotide nucleotidyltransferase/polynucleotide adenylyltransferase
Azospirillum brasilense Sp245 0.52 AZOBR_RS08400 3-oxoacyl-ACP synthase 0.54 AZOBR_RS01385 polynucleotide phosphorylase
Synechococcus elongatus PCC 7942 0.52 Synpcc7942_0537 fabF 3-oxoacyl-(acyl carrier protein) synthase II 0.44 Synpcc7942_2440 pnp polynucleotide phosphorylase/polyadenylase
Dinoroseobacter shibae DFL-12 0.52 Dshi_2180 Beta-ketoacyl synthase (RefSeq) 0.54 Dshi_2997 Polyribonucleotide nucleotidyltransferase (RefSeq)
Phaeobacter inhibens DSM 17395 0.51 PGA1_c17890 3-oxoacyl-[acyl-carrier-protein] synthase FabF 0.52 PGA1_c33000 polyribonucleotide nucleotidyltransferase Pnp
Azospirillum sp. SherDot2 0.51 MPMX19_02497 3-oxoacyl-[acyl-carrier-protein] synthase 2 0.54 MPMX19_02526 Polyribonucleotide nucleotidyltransferase
Agrobacterium fabrum C58 0.50 Atu1097 3-oxoacyl-(acyl carrier protein) synthase II 0.55 Atu0082 polyribonucleotide nucleotidyltransferase
Rhodopseudomonas palustris CGA009 0.50 TX73_015890 beta-ketoacyl-ACP synthase II 0.54 TX73_002245 polyribonucleotide nucleotidyltransferase
Desulfovibrio vulgaris Hildenborough JW710 0.49 DVU1204 fabF 3-oxoacyl-(acyl-carrier-protein) synthase II (TIGR) 0.41 DVU0503 pnp polyribonucleotide nucleotidyltransferase (TIGR)
Brevundimonas sp. GW460-12-10-14-LB2 0.49 A4249_RS06790 beta-ketoacyl-ACP synthase II 0.51 A4249_RS13355 polyribonucleotide nucleotidyltransferase
Sphingomonas koreensis DSMZ 15582 0.49 Ga0059261_0362 beta-ketoacyl-acyl-carrier-protein synthase II 0.51 Ga0059261_2140 polyribonucleotide nucleotidyltransferase
Bacteroides thetaiotaomicron VPI-5482 0.49 BT3358 3-oxoacyl-[acyl-carrier-protein] synthase II (NCBI ptt file) 0.39 BT2563 polyribonucleotide nucleotidyltransferase (NCBI ptt file)
Bacteroides ovatus ATCC 8483 0.49 BACOVA_01956 beta-ketoacyl-acyl-carrier-protein synthase II 0.39 BACOVA_01641 polyribonucleotide nucleotidyltransferase
Bacteroides stercoris CC31F 0.48 HMPREF1181_RS02425 beta-ketoacyl-ACP synthase II 0.38 HMPREF1181_RS00815 polyribonucleotide nucleotidyltransferase
Bosea sp. OAE506 0.48 ABIE41_RS17750 beta-ketoacyl-ACP synthase II 0.55 ABIE41_RS04595 polyribonucleotide nucleotidyltransferase
Sinorhizobium meliloti 1021 0.48 SMc00574 3-oxoacyl-ACP synthase 0.54 SMc00324 polynucleotide phosphorylase/polyadenylase
Phocaeicola vulgatus CL09T03C04 0.47 HMPREF1058_RS10770 beta-ketoacyl-ACP synthase II 0.38 HMPREF1058_RS12555 polyribonucleotide nucleotidyltransferase
Echinicola vietnamensis KMM 6221, DSM 17526 0.47 Echvi_2314 beta-ketoacyl-acyl-carrier-protein synthase II 0.39 Echvi_3436 polyribonucleotide nucleotidyltransferase
Phocaeicola dorei CL03T12C01 0.47 ABI39_RS06325 beta-ketoacyl-ACP synthase II 0.38 ABI39_RS04155 polyribonucleotide nucleotidyltransferase
Pedobacter sp. GW460-11-11-14-LB5 0.47 CA265_RS09880 beta-ketoacyl-[acyl-carrier-protein] synthase II 0.38 CA265_RS08985 polyribonucleotide nucleotidyltransferase
Desulfovibrio vulgaris Miyazaki F 0.46 DvMF_3098 3-oxoacyl-(acyl-carrier-protein) synthase 2 (RefSeq) 0.44 DvMF_2508 polynucleotide phosphorylase/polyadenylase (RefSeq)
Pontibacter actiniarum KMM 6156, DSM 19842 0.46 CA264_00740 beta-ketoacyl-[acyl-carrier-protein] synthase II 0.39 CA264_04880 polyribonucleotide nucleotidyltransferase
Fusobacterium nucleatum SB010 0.46 HUW76_02245 beta-ketoacyl-ACP synthase II 0.44 HUW76_01280 polyribonucleotide nucleotidyltransferase
Parabacteroides merdae CL09T00C40 0.45 HMPREF1078_RS07080 beta-ketoacyl-ACP synthase II 0.38 HMPREF1078_RS17715 polyribonucleotide nucleotidyltransferase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.44 ABZR88_RS01605 beta-ketoacyl-ACP synthase II 0.39 ABZR88_RS06490 polyribonucleotide nucleotidyltransferase
Rhizobium sp. OAE497 0.44 ABIE40_RS09445 beta-ketoacyl-ACP synthase II 0.56 ABIE40_RS00355 polyribonucleotide nucleotidyltransferase
Mycobacterium tuberculosis H37Rv 0.34 Rv2245 3-oxoacyl-[acyl-carrier protein] synthase 1 KasA (beta-ketoacyl-ACP synthase) (KAS I) 0.40 Rv2783c Bifunctional protein polyribonucleotide nucleotidyltransferase GpsI: guanosine pentaphosphate synthetase + polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) (pnpase)

Not shown: 0 genomes with orthologs for b1095 only; 3 genomes with orthologs for b3164 only