Conservation of cofitness between b2518 and b2500 in Escherichia coli BW25113

96 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2518 ndk nucleoside diphosphate kinase (NCBI) 1.0 b2500 purN phosphoribosylglycinamide formyltransferase (NCBI) 0.37 7
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01191 Nucleoside diphosphate kinase 1.00 OHPLBJKB_01226 Phosphoribosylglycinamide formyltransferase low > 73
Escherichia coli ECRC98 1.00 JDDGAC_25380 ndk nucleoside-diphosphate kinase 0.99 JDDGAC_25750 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC62 1.00 BNILDI_12155 ndk nucleoside-diphosphate kinase 1.00 BNILDI_12265 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC101 1.00 MCAODC_12235 ndk nucleoside-diphosphate kinase 0.99 MCAODC_12335 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC102 1.00 NIAGMN_19475 ndk nucleoside-diphosphate kinase 0.99 NIAGMN_19575 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC101 1.00 OKFHMN_21705 ndk nucleoside-diphosphate kinase 0.99 OKFHMN_21805 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli BL21 1.00 ECD_02410 multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase 1.00 ECD_02392 phosphoribosylglycinamide formyltransferase 1 — —
Escherichia coli ECRC99 1.00 KEDOAH_06515 ndk nucleoside-diphosphate kinase 1.00 KEDOAH_06415 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECOR27 1.00 NOLOHH_13355 ndk nucleoside-diphosphate kinase 1.00 NOLOHH_13455 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECOR38 0.99 HEPCGN_20825 ndk nucleoside-diphosphate kinase 0.99 HEPCGN_20970 purN phosphoribosylglycinamide formyltransferase low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14305 nucleoside-diphosphate kinase 0.99 ECOLIN_RS14195 phosphoribosylglycinamide formyltransferase low > 52
Escherichia fergusonii Becca 0.99 EFB2_01372 Nucleoside diphosphate kinase 0.99 EFB2_01398 Phosphoribosylglycinamide formyltransferase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF2415 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.89 GFF2168 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 78
Klebsiella michiganensis M5al 0.96 BWI76_RS21100 nucleoside-diphosphate kinase 0.82 BWI76_RS20970 phosphoribosylglycinamide formyltransferase low > 92
Enterobacter asburiae PDN3 0.95 EX28DRAFT_0125 nucleoside diphosphate kinase (EC 2.7.4.6) 0.85 EX28DRAFT_0167 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent low > 76
Enterobacter sp. TBS_079 0.95 MPMX20_03396 Nucleoside diphosphate kinase 0.86 MPMX20_03355 Phosphoribosylglycinamide formyltransferase low > 85
Erwinia tracheiphila SCR3 0.91 LU632_RS17820 ndk nucleoside-diphosphate kinase 0.72 LU632_RS08270 purN phosphoribosylglycinamide formyltransferase low > 74
Pantoea sp. MT58 0.90 IAI47_05035 nucleoside-diphosphate kinase 0.76 IAI47_05175 phosphoribosylglycinamide formyltransferase low > 76
Dickeya dadantii 3937 0.81 DDA3937_RS15485 nucleoside-diphosphate kinase 0.69 DDA3937_RS06020 phosphoribosylglycinamide formyltransferase low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS15595 nucleoside-diphosphate kinase 0.71 HGI48_RS06065 phosphoribosylglycinamide formyltransferase — —
Serratia liquefaciens MT49 0.81 IAI46_19295 nucleoside-diphosphate kinase 0.69 IAI46_18890 phosphoribosylglycinamide formyltransferase low > 86
Dickeya dianthicola ME23 0.80 DZA65_RS16670 nucleoside-diphosphate kinase 0.70 DZA65_RS06415 phosphoribosylglycinamide formyltransferase low > 75
Pectobacterium carotovorum WPP14 0.80 HER17_RS06080 nucleoside-diphosphate kinase 0.67 HER17_RS15470 phosphoribosylglycinamide formyltransferase 0.51 21
Rahnella sp. WP5 0.79 EX31_RS20530 nucleoside-diphosphate kinase 0.67 EX31_RS22690 phosphoribosylglycinamide formyltransferase low > 89
Alteromonas macleodii MIT1002 0.74 MIT1002_02793 Nucleoside diphosphate kinase 0.61 MIT1002_02220 Phosphoribosylglycinamide formyltransferase — —
Shewanella sp. ANA-3 0.73 Shewana3_2272 nucleoside diphosphate kinase (RefSeq) 0.57 Shewana3_2546 purN phosphoribosylglycinamide formyltransferase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.73 B158DRAFT_1148 nucleoside diphosphate kinase (EC 2.7.4.6) 0.57 B158DRAFT_2384 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Shewanella loihica PV-4 0.72 Shew_2310 nucleoside-diphosphate kinase (RefSeq) 0.57 Shew_1512 phosphoribosylglycinamide formyltransferase (RefSeq) — —
Acinetobacter radioresistens SK82 0.71 MPMX26_00425 Nucleoside diphosphate kinase 0.41 MPMX26_02207 Phosphoribosylglycinamide formyltransferase — —
Shewanella oneidensis MR-1 0.71 SO2274 ndk nucleoside diphosphate kinase (NCBI ptt file) 0.56 SO2761 purN phosphoribosylglycinamide formyltransferase (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.71 Sama_1301 ndk nucleoside diphosphate kinase (RefSeq) 0.57 Sama_2098 purN phosphoribosylglycinamide formyltransferase (RefSeq) — —
Marinobacter adhaerens HP15 0.70 HP15_1489 nucleoside diphosphate kinase 0.50 HP15_1298 phosphoribosylglycinamide formyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.69 CSW01_03925 nucleoside-diphosphate kinase 0.65 CSW01_11355 phosphoribosylglycinamide formyltransferase — —
Pseudomonas sp. S08-1 0.66 OH686_17510 Nucleoside diphosphate kinase 0.60 OH686_18990 phosphoribosylglycinamide formyltransferase — —
Pseudomonas stutzeri RCH2 0.65 Psest_1258 Nucleoside diphosphate kinase 0.60 Psest_1473 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.2738.1 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.37 Xcc-8004.1673.1 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS00065 nucleoside-diphosphate kinase 0.41 LRK54_RS12940 phosphoribosylglycinamide formyltransferase — —
Rhodanobacter denitrificans MT42 0.64 LRK55_RS18060 nucleoside-diphosphate kinase 0.41 LRK55_RS12640 phosphoribosylglycinamide formyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS05460 nucleoside-diphosphate kinase 0.40 ABZR86_RS19860 phosphoribosylglycinamide formyltransferase — —
Pseudomonas putida KT2440 0.64 PP_0849 Nucleoside diphosphate kinase 0.60 PP_1664 phosphoribosylglycinamide formyltransferase 1 — —
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_07145 ndk nucleoside-diphosphate kinase 0.39 OKGIIK_02310 purN phosphoribosylglycinamide formyltransferase — —
Paraburkholderia graminis OAS925 0.64 ABIE53_002745 nucleoside-diphosphate kinase 0.46 ABIE53_003298 phosphoribosylglycinamide formyltransferase-1 — —
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS13160 nucleoside diphosphate kinase 0.46 RR42_RS17050 phosphoribosylglycinamide formyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_3182 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.58 Pf6N2E2_5728 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_06610 nucleoside diphosphate kinase 0.58 AO356_19085 phosphoribosylglycinamide formyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_00513 nucleoside diphosphate kinase 0.42 H281DRAFT_04075 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase — —
Pseudomonas sp. RS175 0.63 PFR28_00293 Nucleoside diphosphate kinase 0.58 PFR28_03218 Phosphoribosylglycinamide formyltransferase — —
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS12595 nucleoside diphosphate kinase 0.47 BPHYT_RS15670 phosphoribosylglycinamide formyltransferase — —
Lysobacter sp. OAE881 0.63 ABIE51_RS09410 nucleoside-diphosphate kinase 0.39 ABIE51_RS15895 phosphoribosylglycinamide formyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_858 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.59 Pf1N1B4_3697 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_15870 nucleoside diphosphate kinase 0.58 AO353_02685 phosphoribosylglycinamide formyltransferase — —
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_4866 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.58 PfGW456L13_4253 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_1244 nucleoside diphosphate kinase 0.57 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_1244 nucleoside diphosphate kinase 0.57 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase — —
Pseudomonas fluorescens SBW25 0.61 PFLU_RS24820 nucleoside-diphosphate kinase 0.58 PFLU_RS22070 phosphoribosylglycinamide formyltransferase low > 109
Variovorax sp. OAS795 0.61 ABID97_RS14205 nucleoside-diphosphate kinase 0.42 ABID97_RS07775 phosphoribosylglycinamide formyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS24820 nucleoside-diphosphate kinase 0.58 PFLU_RS22070 phosphoribosylglycinamide formyltransferase — —
Pseudomonas simiae WCS417 0.61 PS417_23165 nucleoside diphosphate kinase 0.58 PS417_20125 phosphoribosylglycinamide formyltransferase — —
Variovorax sp. SCN45 0.61 GFF991 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.44 GFF6047 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Rhodospirillum rubrum S1H 0.60 Rru_A2169 Nucleoside-diphosphate kinase (NCBI) 0.42 Rru_A2168 Phosphoribosylglycinamide formyltransferase (NCBI) — —
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS05960 nucleoside-diphosphate kinase 0.46 QEN71_RS03040 phosphoribosylglycinamide formyltransferase — —
Dechlorosoma suillum PS 0.59 Dsui_3146 nucleoside diphosphate kinase 0.48 Dsui_1545 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Desulfovibrio vulgaris Miyazaki F 0.59 DvMF_3160 Nucleoside-diphosphate kinase (RefSeq) 0.36 DvMF_2769 phosphoribosylglycinamide formyltransferase (RefSeq) — —
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS14815 nucleoside diphosphate kinase 0.49 HSERO_RS05910 phosphoribosylglycinamide formyltransferase — —
Castellaniella sp019104865 MT123 0.58 ABCV34_RS02605 nucleoside-diphosphate kinase 0.44 ABCV34_RS05225 phosphoribosylglycinamide formyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.58 DVU2333 ndk nucleoside diphosphate kinase (TIGR) 0.42 DVU0736 purN phosphoribosylglycinamide formyltransferase (TIGR) low > 55
Sphingomonas koreensis DSMZ 15582 0.57 Ga0059261_0873 nucleoside diphosphate kinase (EC 2.7.4.6) 0.33 Ga0059261_0229 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Ralstonia solanacearum PSI07 0.57 RPSI07_RS18120 nucleoside-diphosphate kinase 0.50 RPSI07_RS12625 phosphoribosylglycinamide formyltransferase — —
Phaeobacter inhibens DSM 17395 0.57 PGA1_c19750 nucleoside diphosphate kinase Ndk 0.37 PGA1_c13270 phosphoribosylglycinamide formyltransferase PurN — —
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS10895 nucleoside-diphosphate kinase 0.48 ABZR87_RS00380 phosphoribosylglycinamide formyltransferase — —
Ralstonia solanacearum IBSBF1503 0.56 RALBFv3_RS15255 nucleoside-diphosphate kinase 0.50 RALBFv3_RS04760 phosphoribosylglycinamide formyltransferase — —
Ralstonia solanacearum UW163 0.56 UW163_RS12720 nucleoside-diphosphate kinase 0.50 UW163_RS08910 phosphoribosylglycinamide formyltransferase — —
Ralstonia solanacearum GMI1000 0.56 RS_RS06065 nucleoside-diphosphate kinase 0.51 RS_RS12320 phosphoribosylglycinamide formyltransferase — —
Magnetospirillum magneticum AMB-1 0.56 AMB_RS18020 nucleoside-diphosphate kinase 0.42 AMB_RS14335 phosphoribosylglycinamide formyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.56 GFF4867 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.44 GFF767 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Acidovorax sp. GW101-3H11 0.56 Ac3H11_1790 Nucleoside diphosphate kinase (EC 2.7.4.6) 0.44 Ac3H11_1709 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Dinoroseobacter shibae DFL-12 0.55 Dshi_1350 Nucleoside-diphosphate kinase (RefSeq) 0.37 Dshi_1888 phosphoribosylglycinamide formyltransferase (RefSeq) — —
Azospirillum brasilense Sp245 0.54 AZOBR_RS16305 nucleoside diphosphate kinase 0.40 AZOBR_RS16295 phosphoribosylglycinamide formyltransferase — —
Sinorhizobium meliloti 1021 0.54 SMc00595 nucleoside diphosphate kinase 0.42 SMc00614 phosphoribosylglycinamide formyltransferase — —
Agrobacterium fabrum C58 0.54 Atu1122 nucleoside diphosphate kinase 0.37 Atu1140 phosphoribosyalaminoimidazole-succinocarboxamide synthase — —
Azospirillum sp. SherDot2 0.54 MPMX19_01455 Nucleoside diphosphate kinase 0.38 MPMX19_01305 Phosphoribosylglycinamide formyltransferase — —
Rhodopseudomonas palustris CGA009 0.52 TX73_015810 nucleoside-diphosphate kinase 0.34 TX73_015790 phosphoribosylglycinamide formyltransferase — —
Rhizobium sp. OAE497 0.52 ABIE40_RS06465 nucleoside-diphosphate kinase 0.43 ABIE40_RS06555 phosphoribosylglycinamide formyltransferase — —
Synechococcus elongatus PCC 7942 0.49 Synpcc7942_2497 ndk nucleoside diphosphate kinase 0.28 Synpcc7942_0958 purN phosphoribosylglycinamide formyltransferase — —
Caulobacter crescentus NA1000 0.48 CCNA_01770 nucleoside diphosphate kinase 0.36 CCNA_01774 phosphoribosylglycinamide formyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.48 A4249_RS08235 nucleoside-diphosphate kinase 0.32 A4249_RS08220 phosphoribosylglycinamide formyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_01770 nucleoside diphosphate kinase 0.36 CCNA_01774 phosphoribosylglycinamide formyltransferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.45 CA265_RS24780 nucleoside-diphosphate kinase 0.23 CA265_RS02710 phosphoribosylglycinamide formyltransferase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.45 Echvi_0995 Nucleoside diphosphate kinase 0.25 Echvi_1470 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.44 CA264_18820 nucleoside-diphosphate kinase 0.26 CA264_18635 phosphoribosylglycinamide formyltransferase — —
Mycobacterium tuberculosis H37Rv 0.42 Rv2445c Probable nucleoside diphosphate kinase NdkA (NDK) (NDP kinase) (nucleoside-2-P kinase) 0.26 Rv0956 Probable 5'-phosphoribosylglycinamide formyltransferase PurN (GART) (gar transformylase) (5'-phosphoribosylglycinamide transformylase) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.41 ABZR88_RS21635 nucleoside-diphosphate kinase 0.24 ABZR88_RS01870 phosphoribosylglycinamide formyltransferase — —
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS08290 nucleoside-diphosphate kinase 0.22 HMPREF1058_RS10780 phosphoribosylglycinamide formyltransferase low > 67
Bacteroides thetaiotaomicron VPI-5482 0.36 BT3925 nucleoside diphosphate kinase (NCBI ptt file) 0.22 BT3360 phosphoribosylglycinamide formyltransferase (NCBI ptt file) low > 81
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS02465 nucleoside-diphosphate kinase 0.22 ABI39_RS06315 phosphoribosylglycinamide formyltransferase low > 72
Bacteroides ovatus ATCC 8483 0.36 BACOVA_01151 nucleoside diphosphate kinase 0.24 BACOVA_01954 putative phosphoribosylglycinamide formyltransferase low > 94

Not shown: 3 genomes with orthologs for b2518 only; 2 genomes with orthologs for b2500 only