Conservation of cofitness between b2733 and b1860 in Escherichia coli BW25113

99 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2733 mutS DNA mismatch repair protein (NCBI) 1.0 b1860 ruvB Holliday junction DNA helicase B (NCBI) 0.23 19
Escherichia coli BL21 1.00 ECD_02583 methyl-directed mismatch repair protein 1.00 ECD_01831 ATP-dependent DNA helicase, component of RuvABC resolvasome — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01000 DNA mismatch repair protein MutS 1.00 OHPLBJKB_01868 Holliday junction ATP-dependent DNA helicase RuvB — —
Escherichia coli ECRC101 1.00 OKFHMN_20525 mutS DNA mismatch repair protein MutS 1.00 OKFHMN_26285 ruvB Holliday junction branch migration DNA helicase RuvB — —
Escherichia coli ECRC101 1.00 MCAODC_11050 mutS DNA mismatch repair protein MutS 1.00 MCAODC_19120 ruvB Holliday junction branch migration DNA helicase RuvB — —
Escherichia coli ECOR27 1.00 NOLOHH_12370 mutS DNA mismatch repair protein MutS 1.00 NOLOHH_16730 ruvB Holliday junction branch migration DNA helicase RuvB — —
Escherichia coli ECRC99 1.00 KEDOAH_07610 mutS DNA mismatch repair protein MutS 1.00 KEDOAH_01820 ruvB Holliday junction branch migration DNA helicase RuvB — —
Escherichia coli ECRC98 1.00 JDDGAC_24190 mutS DNA mismatch repair protein MutS 1.00 JDDGAC_00860 ruvB Holliday junction branch migration DNA helicase RuvB — —
Escherichia coli ECRC102 1.00 NIAGMN_18295 mutS DNA mismatch repair protein MutS 1.00 NIAGMN_01775 ruvB Holliday junction branch migration DNA helicase RuvB — —
Escherichia coli ECRC62 1.00 BNILDI_10920 mutS DNA mismatch repair protein MutS 1.00 BNILDI_15520 ruvB Holliday junction branch migration DNA helicase RuvB — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS15275 DNA mismatch repair protein MutS 1.00 ECOLIN_RS10360 Holliday junction branch migration DNA helicase RuvB — —
Escherichia coli ECOR38 0.99 HEPCGN_19705 mutS DNA mismatch repair protein MutS 1.00 HEPCGN_04695 ruvB Holliday junction branch migration DNA helicase RuvB low > 85
Escherichia fergusonii Becca 0.98 EFB2_01179 DNA mismatch repair protein MutS 1.00 EFB2_02082 Holliday junction ATP-dependent DNA helicase RuvB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF4773 DNA mismatch repair protein MutS 0.96 GFF1639 Holliday junction DNA helicase RuvB — —
Enterobacter sp. TBS_079 0.92 MPMX20_03619 DNA mismatch repair protein MutS 0.95 MPMX20_02766 Holliday junction ATP-dependent DNA helicase RuvB low > 85
Enterobacter asburiae PDN3 0.92 EX28DRAFT_2829 DNA mismatch repair protein MutS 0.95 EX28DRAFT_0696 Holliday junction DNA helicase subunit RuvB — —
Klebsiella michiganensis M5al 0.92 BWI76_RS22600 DNA mismatch repair protein MutS 0.94 BWI76_RS18145 Holliday junction branch migration DNA helicase RuvB — —
Dickeya dianthicola ME23 0.85 DZA65_RS05570 DNA mismatch repair protein MutS 0.87 DZA65_RS10530 Holliday junction branch migration DNA helicase RuvB — —
Serratia liquefaciens MT49 0.85 IAI46_03800 DNA mismatch repair protein MutS 0.86 IAI46_14620 Holliday junction branch migration DNA helicase RuvB — —
Dickeya dadantii 3937 0.85 DDA3937_RS05230 DNA mismatch repair protein MutS 0.87 DDA3937_RS10085 Holliday junction branch migration DNA helicase RuvB — —
Dickeya dianthicola 67-19 0.85 HGI48_RS05230 DNA mismatch repair protein MutS 0.87 HGI48_RS10115 Holliday junction branch migration DNA helicase RuvB — —
Erwinia tracheiphila SCR3 0.84 LU632_RS06485 mutS DNA mismatch repair protein MutS 0.85 LU632_RS13410 ruvB Holliday junction branch migration DNA helicase RuvB — —
Rahnella sp. WP5 0.84 EX31_RS07820 DNA mismatch repair protein MutS 0.86 EX31_RS11670 Holliday junction branch migration DNA helicase RuvB — —
Pectobacterium carotovorum WPP14 0.84 HER17_RS16220 DNA mismatch repair protein MutS 0.86 HER17_RS11840 Holliday junction branch migration DNA helicase RuvB low > 75
Pantoea sp. MT58 0.82 IAI47_04240 DNA mismatch repair protein MutS 0.87 IAI47_08450 Holliday junction branch migration DNA helicase RuvB low > 76
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_02840 DNA mismatch repair protein MutS 0.79 CSW01_09240 Holliday junction branch migration DNA helicase RuvB low > 62
Shewanella sp. ANA-3 0.67 Shewana3_1125 DNA mismatch repair protein MutS (RefSeq) 0.79 Shewana3_1957 ruvB Holliday junction DNA helicase RuvB (RefSeq) — —
Shewanella loihica PV-4 0.66 Shew_1214 DNA mismatch repair protein (RefSeq) 0.77 Shew_2075 ruvB Holliday junction DNA helicase B (RefSeq) low > 60
Shewanella oneidensis MR-1 0.65 SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) 0.77 SO2429 ruvB Holliday junction DNA helicase RuvB (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.65 Sama_1045 DNA mismatch repair protein MutS (RefSeq) 0.79 Sama_1839 ruvB Holliday junction DNA helicase RuvB (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.63 MIT1002_00953 DNA mismatch repair protein MutS 0.81 MIT1002_01333 Holliday junction ATP-dependent DNA helicase RuvB — —
Marinobacter adhaerens HP15 0.60 HP15_1047 DNA mismatch repair protein MutS 0.76 HP15_2040 Holliday junction ATP-dependent DNA helicase RuvB — —
Pseudomonas sp. RS175 0.58 PFR28_00429 DNA mismatch repair protein MutS 0.72 PFR28_03412 Holliday junction ATP-dependent DNA helicase RuvB low > 88
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_05875 DNA mismatch repair protein MutS 0.72 AO356_18025 ATP-dependent DNA helicase RuvB low > 104
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_3035 DNA mismatch repair protein MutS 0.72 Pf6N2E2_5537 Holliday junction DNA helicase RuvB — —
Pseudomonas simiae WCS417 0.58 PS417_05680 DNA mismatch repair protein MutS 0.73 PS417_22445 ATP-dependent DNA helicase RuvB 0.28 56
Pseudomonas stutzeri RCH2 0.58 Psest_2875 DNA mismatch repair protein MutS 0.72 Psest_1497 Holliday junction DNA helicase, RuvB subunit — —
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_3117 DNA mismatch repair protein MutS 0.73 Pf1N1B4_637 Holliday junction DNA helicase RuvB — —
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_16625 DNA mismatch repair protein MutS 0.73 AO353_03580 ATP-dependent DNA helicase RuvB low > 101
Pseudomonas putida KT2440 0.57 PP_1626 DNA mismatch repair protein MutS 0.74 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_1376 DNA mismatch repair protein MutS 0.72 Psyr_1410 Holliday junction DNA helicase RuvB low > 86
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_1376 DNA mismatch repair protein MutS 0.72 Psyr_1410 Holliday junction DNA helicase RuvB low > 86
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_4672 DNA mismatch repair protein MutS 0.73 PfGW456L13_1853 Holliday junction DNA helicase RuvB low > 87
Pseudomonas fluorescens SBW25 0.57 PFLU_RS05765 DNA mismatch repair protein MutS 0.73 PFLU_RS24085 Holliday junction branch migration DNA helicase RuvB low > 109
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS05765 DNA mismatch repair protein MutS 0.73 PFLU_RS24085 Holliday junction branch migration DNA helicase RuvB low > 109
Pseudomonas sp. S08-1 0.57 OH686_18195 DNA mismatch repair protein MutS 0.74 OH686_19135 Holliday junction DNA helicase RuvB low > 80
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS00630 DNA mismatch repair protein MutS 0.70 ABZR86_RS10830 Holliday junction branch migration DNA helicase RuvB low > 74
Lysobacter sp. OAE881 0.54 ABIE51_RS07785 DNA mismatch repair protein MutS 0.70 ABIE51_RS05055 Holliday junction branch migration DNA helicase RuvB — —
Rhodanobacter denitrificans MT42 0.54 LRK55_RS14650 DNA mismatch repair protein MutS 0.69 LRK55_RS04680 Holliday junction branch migration DNA helicase RuvB — —
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_03705 mutS DNA mismatch repair protein MutS 0.69 OKGIIK_01850 ruvB Holliday junction branch migration DNA helicase RuvB — —
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS14935 DNA mismatch repair protein MutS 0.69 LRK54_RS04900 Holliday junction branch migration DNA helicase RuvB — —
Kangiella aquimarina DSM 16071 0.52 B158DRAFT_1529 DNA mismatch repair protein MutS 0.76 B158DRAFT_1136 Holliday junction DNA helicase subunit RuvB low > 40
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.3760.1 DNA mismatch repair protein MutS 0.70 Xcc-8004.1439.1 Holliday junction DNA helicase RuvB — —
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_00537 DNA mismatch repair protein MutS 0.73 H281DRAFT_04255 Holliday junction DNA helicase subunit RuvB — —
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS06285 DNA mismatch repair protein MutS 0.72 RR42_RS02700 ATP-dependent DNA helicase RuvB — —
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS10580 DNA mismatch repair protein MutS 0.72 ABZR87_RS07620 Holliday junction branch migration DNA helicase RuvB low > 80
Dechlorosoma suillum PS 0.49 Dsui_2244 DNA mismatch repair protein MutS 0.72 Dsui_0484 Holliday junction DNA helicase, RuvB subunit — —
Ralstonia solanacearum UW163 0.49 UW163_RS12390 DNA mismatch repair protein MutS 0.72 UW163_RS01920 Holliday junction branch migration DNA helicase RuvB — —
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS14920 DNA mismatch repair protein MutS 0.72 RALBFv3_RS11665 Holliday junction branch migration DNA helicase RuvB — —
Ralstonia solanacearum PSI07 0.49 RPSI07_RS18440 DNA mismatch repair protein MutS 0.72 RPSI07_RS21555 Holliday junction branch migration DNA helicase RuvB — —
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS16360 DNA mismatch repair protein MutS 0.71 HSERO_RS02095 Holliday junction DNA helicase RuvB low > 78
Ralstonia solanacearum GMI1000 0.49 RS_RS05735 DNA mismatch repair protein MutS 0.72 RS_RS02485 Holliday junction branch migration DNA helicase RuvB — —
Paraburkholderia graminis OAS925 0.49 ABIE53_002719 DNA mismatch repair protein MutS 0.73 ABIE53_003495 Holliday junction DNA helicase RuvB low > 113
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS12475 DNA mismatch repair protein MutS 0.73 BPHYT_RS16620 holliday junction ATP-dependent DNA helicase RuvB — —
Acinetobacter radioresistens SK82 0.47 MPMX26_01954 DNA mismatch repair protein MutS 0.70 MPMX26_02186 Holliday junction ATP-dependent DNA helicase RuvB low > 36
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS06085 DNA mismatch repair protein MutS 0.72 QEN71_RS26800 Holliday junction branch migration DNA helicase RuvB — —
Castellaniella sp019104865 MT123 0.44 ABCV34_RS00270 DNA mismatch repair protein MutS 0.70 ABCV34_RS07990 Holliday junction branch migration DNA helicase RuvB — —
Acidovorax sp. GW101-3H11 0.44 Ac3H11_3641 DNA mismatch repair protein MutS 0.70 Ac3H11_4685 Holliday junction DNA helicase RuvB — —
Variovorax sp. SCN45 0.44 GFF6634 DNA mismatch repair protein MutS 0.71 GFF2090 Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) low > 127
Variovorax sp. OAS795 0.43 ABID97_RS20815 DNA mismatch repair protein MutS 0.70 ABID97_RS24875 Holliday junction branch migration DNA helicase RuvB — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF3599 DNA mismatch repair protein MutS 0.72 GFF1665 Holliday junction DNA helicase RuvB — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.36 ABZR88_RS10580 DNA mismatch repair protein MutS 0.58 ABZR88_RS07990 Holliday junction branch migration DNA helicase RuvB low > 71
Bacteroides ovatus ATCC 8483 0.36 BACOVA_02824 DNA mismatch repair protein MutS 0.57 BACOVA_00895 Holliday junction DNA helicase RuvB — —
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS11435 DNA mismatch repair protein MutS 0.56 HMPREF1058_RS11890 Holliday junction branch migration DNA helicase RuvB low > 67
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS05500 DNA mismatch repair protein MutS 0.56 ABI39_RS04970 Holliday junction branch migration DNA helicase RuvB low > 72
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS01980 DNA mismatch repair protein MutS 0.57 HMPREF1181_RS02130 Holliday junction branch migration DNA helicase RuvB low > 56
Bacteroides thetaiotaomicron VPI-5482 0.36 BT3121 DNA mismatch repair protein mutS (NCBI ptt file) 0.57 BT3285 Holliday junction DNA helicase ruvB (NCBI ptt file) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.36 CA264_18545 DNA mismatch repair protein MutS 0.58 CA264_19800 Holliday junction branch migration DNA helicase RuvB — —
Parabacteroides merdae CL09T00C40 0.35 HMPREF1078_RS06455 DNA mismatch repair protein MutS 0.56 HMPREF1078_RS06175 Holliday junction branch migration DNA helicase RuvB low > 61
Dinoroseobacter shibae DFL-12 0.35 Dshi_3466 DNA mismatch repair protein MutS (RefSeq) 0.60 Dshi_1105 Holliday junction DNA helicase RuvB (RefSeq) — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.35 Echvi_0960 DNA mismatch repair protein MutS 0.56 Echvi_0825 Holliday junction DNA helicase, RuvB subunit low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.34 CA265_RS08220 DNA mismatch repair protein MutS 0.56 CA265_RS07710 Holliday junction branch migration DNA helicase RuvB low > 88
Synechococcus elongatus PCC 7942 0.34 Synpcc7942_2247 mutS DNA mismatch repair protein 0.57 Synpcc7942_0835 ruvB Holliday junction DNA helicase B — —
Azospirillum sp. SherDot2 0.33 MPMX19_00908 DNA mismatch repair protein MutS 0.60 MPMX19_00698 Holliday junction ATP-dependent DNA helicase RuvB — —
Fusobacterium nucleatum SB010 0.33 HUW76_04335 DNA mismatch repair protein MutS 0.59 HUW76_04170 Holliday junction branch migration DNA helicase RuvB low > 35
Phaeobacter inhibens DSM 17395 0.33 PGA1_c35000 DNA mismatch repair protein MutS 0.62 PGA1_c05870 holliday junction ATP-dependent DNA helicase RuvB low > 62
Rhodospirillum rubrum S1H 0.33 Rru_A3541 MutS 1 protein (NCBI) 0.63 Rru_A1089 Holliday junction DNA helicase RuvB (NCBI) — —
Azospirillum brasilense Sp245 0.33 AZOBR_RS02125 DNA mismatch repair protein MutS 0.60 AZOBR_RS09050 Holliday junction DNA helicase RuvB — —
Desulfovibrio vulgaris Miyazaki F 0.32 DvMF_0355 DNA mismatch repair protein MutS (RefSeq) 0.60 DvMF_3205 ruvB Holliday junction DNA helicase RuvB (RefSeq) low > 51
Magnetospirillum magneticum AMB-1 0.32 AMB_RS01455 DNA mismatch repair protein MutS 0.60 AMB_RS16245 Holliday junction branch migration DNA helicase RuvB — —
Rhodopseudomonas palustris CGA009 0.32 TX73_002655 DNA mismatch repair protein MutS 0.60 TX73_005665 Holliday junction branch migration DNA helicase RuvB — —
Agrobacterium fabrum C58 0.32 Atu0345 DNA mismatch repair protein, MutS family 0.61 Atu3722 Holliday junction DNA helicase RuvB — —
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_3784 DNA mismatch repair protein MutS 0.60 Ga0059261_0819 Holliday junction DNA helicase subunit RuvB — —
Desulfovibrio vulgaris Hildenborough JW710 0.32 DVU1649 mutS DNA mismatch repair protein MutS (TIGR) 0.60 DVU2255 ruvB Holliday junction DNA helicase RuvB (TIGR) low > 55
Rhizobium sp. OAE497 0.31 ABIE40_RS01775 DNA mismatch repair protein MutS 0.61 ABIE40_RS15760 Holliday junction branch migration DNA helicase RuvB low > 107
Sinorhizobium meliloti 1021 0.31 SMc01125 DNA mismatch repair protein MutS 0.62 SMc03965 Holliday junction DNA helicase RuvB — —
Bosea sp. OAE506 0.30 ABIE41_RS03650 DNA mismatch repair protein MutS 0.62 ABIE41_RS09480 Holliday junction branch migration DNA helicase RuvB — —
Brevundimonas sp. GW460-12-10-14-LB2 0.28 A4249_RS12110 DNA mismatch repair protein MutS 0.59 A4249_RS15865 Holliday junction branch migration DNA helicase RuvB low > 48
Caulobacter crescentus NA1000 Δfur 0.28 CCNA_00012 DNA mismatch repair protein MutS 0.61 CCNA_03344 Holliday junction DNA helicase RuvB — —
Caulobacter crescentus NA1000 0.28 CCNA_00012 DNA mismatch repair protein MutS 0.61 CCNA_03344 Holliday junction DNA helicase RuvB low > 66

Not shown: 0 genomes with orthologs for b2733 only; 2 genomes with orthologs for b1860 only