Homologs of Xcc-8004.4441.1 from Xanthomonas campestris pv. campestris strain 8004

Tyrosine recombinase XerD
SEED: Tyrosine recombinase XerD
KEGG: integrase/recombinase XerD

Top 100 hits from BLASTp (E < 0.01)

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Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.4441.1		Tyrosine recombinase XerD	sig.	100	100
o	Lysobacter sp. OAE881	ABIE51_RS04495		site-specific tyrosine recombinase XerD	strong	72	100
o	Dyella japonica UNC79MFTsu3.2	ABZR86_RS19225		site-specific tyrosine recombinase XerD	strong	59	94
o	Pseudomonas sp. S08-1	OH686_17750		tyrosine recombinase XerD	insig.	57	93
o	Pectobacterium carotovorum WPP14	HER17_RS17890		site-specific tyrosine recombinase XerD	strong	55	93
o	Rhodanobacter sp. FW510-T8	OKGIIK_11520	xerD	site-specific tyrosine recombinase XerD	insig.	59	94
o	Serratia liquefaciens MT49	IAI46_20730		site-specific tyrosine recombinase XerD	insig.	52	94
o	Dickeya dianthicola 67-19	HGI48_RS03440		site-specific tyrosine recombinase XerD	insig.	54	94
o	Dickeya dianthicola ME23	DZA65_RS03485		site-specific tyrosine recombinase XerD	no data	54	94
o	Pseudomonas stutzeri RCH2	Psest_3129		tyrosine recombinase XerD	insig.	55	94
o	Dickeya dadantii 3937	DDA3937_RS03300		site-specific tyrosine recombinase XerD	insig.	54	93
o	Rahnella sp. WP5	EX31_RS13480		site-specific tyrosine recombinase XerD	strong	52	95
o	Pseudomonas syringae pv. syringae B728a	Psyr_1286		tyrosine recombinase XerD subunit	sig.	54	94
o	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_1286		tyrosine recombinase XerD subunit	sig.	54	94
o	Rhodanobacter denitrificans MT42	LRK55_RS04515		site-specific tyrosine recombinase XerD	strong	58	94
o	Rhodanobacter denitrificans FW104-10B01	LRK54_RS04735		site-specific tyrosine recombinase XerD	insig.	58	94
o	Pseudomonas fluorescens FW300-N2E3	AO353_04365		recombinase XerD	strong	54	94
o	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_3011		Tyrosine recombinase XerD	insig.	53	94
o	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_3145		Tyrosine recombinase XerD	no data	53	94
o	Enterobacter asburiae PDN3	EX28DRAFT_2945		tyrosine recombinase XerD	insig.	53	93
o	Enterobacter sp. TBS_079	MPMX20_03753		Tyrosine recombinase XerD	strong	53	93
o	Pseudomonas fluorescens FW300-N2C3	AO356_06385		recombinase XerD	strong	53	94
o	Pseudomonas fluorescens GW456-L13	PfGW456L13_1721		Tyrosine recombinase XerD	strong	53	94
o	Pseudomonas sp. RS175	PFR28_00331		Tyrosine recombinase XerD	strong	54	94
o	Pseudomonas simiae WCS417	PS417_22895		tyrosine recombinase XerD	strong	53	94
o	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF2991		Tyrosine recombinase XerD	cofit	53	93
o	Pseudomonas fluorescens SBW25	PFLU_RS24560		site-specific tyrosine recombinase XerD	sig.	53	94
o	Pseudomonas fluorescens SBW25-INTG	PFLU_RS24560		site-specific tyrosine recombinase XerD	strong	53	94
o	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_00821		Tyrosine recombinase XerD	sig.	53	93
o	Escherichia coli BL21	ECD_02726		site-specific tyrosine recombinase	strong	53	93
o	Escherichia fergusonii Becca	EFB2_01007		Tyrosine recombinase XerD	strong	53	93
o	Escherichia coli ECOR27	NOLOHH_11495	xerD	site-specific tyrosine recombinase XerD	no data	53	93
o	Escherichia coli ECRC101	OKFHMN_19570	xerD	site-specific tyrosine recombinase XerD	no data	53	93
o	Escherichia coli ECRC101	MCAODC_10090	xerD	site-specific tyrosine recombinase XerD	no data	53	93
o	Escherichia coli ECRC62	BNILDI_10025	xerD	site-specific tyrosine recombinase XerD	insig.	53	93
o	Escherichia coli ECRC98	JDDGAC_23210	xerD	site-specific tyrosine recombinase XerD	no data	53	93
o	Escherichia coli ECRC99	KEDOAH_08570	xerD	site-specific tyrosine recombinase XerD	no data	53	93
o	Escherichia coli Nissle 1917	ECOLIN_RS16125		site-specific tyrosine recombinase XerD	cofit	53	93
o	Escherichia coli BW25113	b2894	xerD	site-specific tyrosine recombinase XerD (NCBI)	strong	53	93
o	Pantoea sp. MT58	IAI47_03820		site-specific tyrosine recombinase XerD	strong	52	93
o	Vibrio cholerae E7946 ATCC 55056	CSW01_12250		site-specific tyrosine recombinase XerD	strong	50	93
o	Escherichia coli ECOR38	HEPCGN_18860	xerD	site-specific tyrosine recombinase XerD	cofit	52	93
o	Pseudomonas putida KT2440	PP_1468		Tyrosine recombinase XerD	strong	53	94
o	Escherichia coli ECRC102	NIAGMN_17335	xerD	site-specific tyrosine recombinase XerD	no data	52	93
o	Klebsiella michiganensis M5al	BWI76_RS23815		site-specific tyrosine recombinase XerD	no data	53	93
o	Erwinia tracheiphila SCR3	LU632_RS05975	xerD	site-specific tyrosine recombinase XerD	no data	51	93
o	Paraburkholderia sabiae LMG 24235	QEN71_RS02755		site-specific tyrosine recombinase XerD	no data	50	97
o	Ralstonia solanacearum GMI1000	RS_RS12755		tyrosine recombinase XerD	no data	52	97
o	Paraburkholderia graminis OAS925	ABIE53_003361		integrase/recombinase XerD	strong	51	95
o	Burkholderia phytofirmans PsJN	BPHYT_RS15950		tyrosine recombinase XerD	sig.	49	96
o	Ralstonia solanacearum IBSBF1503	RALBFv3_RS05140		site-specific tyrosine recombinase XerD	insig.	51	96
o	Ralstonia solanacearum UW163	UW163_RS08485		site-specific tyrosine recombinase XerD	insig.	51	96
o	Herbaspirillum seropedicae SmR1	HSERO_RS04265		tyrosine recombinase XerD	insig.	51	93
o	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_04126		integrase/recombinase XerD	no data	50	95
o	Marinobacter adhaerens HP15	HP15_762		site-specific tyrosine recombinase XerD	insig.	50	94
o	Ralstonia solanacearum PSI07	RPSI07_RS12160		site-specific tyrosine recombinase XerD	insig.	52	93
o	Kangiella aquimarina DSM 16071	B158DRAFT_2265		tyrosine recombinase XerD	strong	47	93
o	Shewanella amazonensis SB2B	Sama_2739		integrase/recombinase XerD (RefSeq)	strong	52	92
o	Shewanella sp. ANA-3	Shewana3_3331		tyrosine recombinase XerD (RefSeq)	strong	50	93
o	Variovorax sp. SCN45	GFF2772		Site-specific tyrosine recombinase XerD	strong	51	92
o	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF5461		Tyrosine recombinase XerD	insig.	51	91
o	Cupriavidus basilensis FW507-4G11	RR42_RS03345		recombinase XerD	sig.	51	92
o	Shewanella loihica PV-4	Shew_0770		tyrosine recombinase XerD (RefSeq)	strong	50	93
o	Shewanella oneidensis MR-1	SO0950	xerD	integrase/recombinase XerD (NCBI ptt file)	strong	50	93
o	Variovorax sp. OAS795	ABID97_RS20265		site-specific tyrosine recombinase XerD	insig.	50	92
o	Alteromonas macleodii MIT1002	MIT1002_00786		Tyrosine recombinase XerD	insig.	49	92
o	Acidovorax sp. GW101-3H11	Ac3H11_302		Tyrosine recombinase XerD	no data	51	93
o	Dechlorosoma suillum PS	Dsui_1217		tyrosine recombinase XerD	cofit	50	95
o	Ralstonia sp. UNC404CL21Col	ABZR87_RS00795		site-specific tyrosine recombinase XerD	strong	50	96
o	Castellaniella sp019104865 MT123	ABCV34_RS00515		site-specific tyrosine recombinase XerD	insig.	50	92
o	Acinetobacter radioresistens SK82	MPMX26_00169		Tyrosine recombinase XerD	no data	51	92
	Dechlorosoma suillum PS	Dsui_2597		tyrosine recombinase XerD	cofit	47	92
o	Desulfovibrio vulgaris Hildenborough JW710	DVU1654	xerD	site-specific recombinase, phage integrase family (TIGR)	sig.	44	92
o	Azospirillum sp. SherDot2	MPMX19_02643		Tyrosine recombinase XerD	no data	45	90
o	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_00850		site-specific tyrosine recombinase XerD	no data	39	92
o	Rhodospirillum rubrum S1H	Rru_A3738		Phage integrase (NCBI)	no data	47	91
o	Rhodopseudomonas palustris CGA009	TX73_002625		site-specific tyrosine recombinase XerD	sig.	43	98
o	Desulfovibrio vulgaris Miyazaki F	DvMF_0359		tyrosine recombinase XerD (RefSeq)	strong	43	91
o	Magnetospirillum magneticum AMB-1	AMB_RS19880		site-specific tyrosine recombinase XerD	cofit	44	92
	Parabacteroides merdae CL09T00C40	HMPREF1078_RS04705		site-specific tyrosine recombinase XerD	sig.	36	93
o	Sinorhizobium meliloti 1021	SMc00691		site-specific tyrosine recombinase XerD	sig.	41	91
o	Rhizobium sp. OAE497	ABIE40_RS17685		site-specific tyrosine recombinase XerD	sig.	41	91
o	Agrobacterium fabrum C58	Atu3629		site-specific tyrosine recombinase XerD	no data	40	94
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_1809		tyrosine recombinase XerD	insig.	36	93
	Mucilaginibacter yixingensis YX-36 DSM 26809	ABZR88_RS10220		site-specific tyrosine recombinase XerD	insig.	36	91
o	Azospirillum brasilense Sp245	AZOBR_RS03240		recombinase XerD	insig.	44	85
	Pedobacter sp. GW460-11-11-14-LB5	CA265_RS09520		site-specific tyrosine recombinase XerD	sig.	34	92
o	Phaeobacter inhibens DSM 17395	PGA1_c14060		tyrosine recombinase XerD	strong	41	93
	Bacteroides ovatus ATCC 8483	BACOVA_02123		tyrosine recombinase XerD	insig.	36	92
	Phocaeicola dorei CL03T12C01	ABI39_RS07000		site-specific tyrosine recombinase XerD	sig.	36	93
	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS09680		site-specific tyrosine recombinase XerD	strong	36	93
	Bacteroides thetaiotaomicron VPI-5482	BT2843		integrase (NCBI ptt file)	strong	36	92
	Bifidobacterium breve UCC2003	BBR_RS16755		site-specific tyrosine recombinase XerD	strong	38	91
	Bacteroides stercoris CC31F	HMPREF1181_RS01250		site-specific tyrosine recombinase XerD	insig.	33	92
	Mycobacterium tuberculosis H37Rv	Rv1701		Probable integrase/recombinase	sig.	40	92
	Rahnella sp. WP5	EX31_RS15165		tyrosine recombinase XerC	strong	39	92
	Lysobacter sp. OAE881	ABIE51_RS03035		tyrosine recombinase XerC	strong	37	92
o	Bosea sp. OAE506	ABIE41_RS06100		site-specific tyrosine recombinase XerD	strong	39	90
o	Dinoroseobacter shibae DFL-12	Dshi_1611		integrase family protein (RefSeq)	strong	40	91
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS15025		tyrosine recombinase XerC	strong	38	92