Homologs of Pf6N2E2_2049 from Pseudomonas fluorescens FW300-N2E2

Bona fide RidA/YjgF/TdcF/RutC subgroup
SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2049 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 100 100
o Pseudomonas fluorescens FW300-N2C3 AO356_00460 reactive intermediate/imine deaminase no data 97 100
o Pseudomonas sp. RS175 PFR28_01387 2-iminobutanoate/2-iminopropanoate deaminase insig. 93 100
o Pseudomonas fluorescens FW300-N2E3 AO353_21730 reactive intermediate/imine deaminase no data 92 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2865 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 91 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5641 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 91 100
o Pseudomonas syringae pv. syringae B728a Psyr_2507 Endoribonuclease L-PSP sig. 88 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2507 Endoribonuclease L-PSP insig. 88 100
o Pseudomonas simiae WCS417 PS417_12115 endoribonuclease L-PSP no data 87 100
o Pseudomonas fluorescens SBW25 PFLU_RS12805 RidA family protein sig. 86 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS12805 RidA family protein sig. 86 100
o Rhizobium sp. OAE497 ABIE40_RS21405 RidA family protein insig. 74 100
o Sinorhizobium meliloti 1021 SM_b21157 translation initiation inhibitor protein insig. 70 100
  Sinorhizobium meliloti 1021 SM_b21139 translation initiation inhibitors insig. 66 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS19100 RidA family protein strong 69 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS01965 RidA family protein insig. 72 88
o Burkholderia phytofirmans PsJN BPHYT_RS03130 hypothetical protein insig. 71 88
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01890 reactive intermediate/imine deaminase insig. 71 88
o Cupriavidus basilensis FW507-4G11 RR42_RS28840 hypothetical protein insig. 71 88
o Ralstonia solanacearum PSI07 RPSI07_RS05465 RidA family protein insig. 69 98
o Paraburkholderia graminis OAS925 ABIE53_000758 reactive intermediate/imine deaminase strong 71 88
o Ralstonia solanacearum GMI1000 RS_RS22865 RidA family protein no data 67 99
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS12635 RidA family protein insig. 71 88
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS18170 RidA family protein no data 66 99
o Ralstonia solanacearum UW163 UW163_RS20960 RidA family protein no data 66 99
o Herbaspirillum seropedicae SmR1 HSERO_RS08735 hypothetical protein insig. 65 99
o Agrobacterium fabrum C58 Atu3926 translation initiation inhibitor insig. 55 97
  Agrobacterium fabrum C58 Atu5232 translation initiation inhibitor no data 53 97
o Klebsiella michiganensis M5al BWI76_RS03895 reactive intermediate/imine deaminase insig. 55 98
o Serratia liquefaciens MT49 IAI46_02310 RidA family protein insig. 51 98
o Variovorax sp. OAS795 ABID97_RS22895 RidA family protein insig. 50 100
o Variovorax sp. SCN45 GFF6707 RidA/YER057c/UK114 superfamily protein insig. 47 100
o Acidovorax sp. GW101-3H11 Ac3H11_699 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein insig. 42 100
  Cupriavidus basilensis FW507-4G11 RR42_RS34135 hypothetical protein insig. 42 98
  Ralstonia solanacearum GMI1000 RS_RS23530 RidA family protein no data 42 98
  Ralstonia solanacearum GMI1000 RS_RS23660 RidA family protein no data 42 98
  Fusobacterium nucleatum SB010 HUW76_10065 RidA family protein strong 48 84
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1327 endoribonuclease L-PSP, putative sig. 42 84
  Synechococcus elongatus PCC 7942 Synpcc7942_0972 YjgF-like protein strong 47 83
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22825 reactive intermediate/imine deaminase strong 43 83
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17590 RidA family protein sig. 40 84
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4943 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 40 89
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS20925 endoribonuclease L-PSP strong 42 85
  Ralstonia solanacearum UW163 UW163_RS22060 endoribonuclease L-PSP insig. 42 85
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17245 RidA family protein no data 42 83
o Pseudomonas putida KT2440 PP_2247 putative Endoribonuclease insig. 37 85
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18400 RidA family protein strong 35 84
  Bacteroides stercoris CC31F HMPREF1181_RS10885 RidA family protein strong 37 84
  Phocaeicola dorei CL03T12C01 ABI39_RS14715 RidA family protein strong 35 84
  Bacteroides thetaiotaomicron VPI-5482 BT1336 putative translation initiation inhibitor (NCBI ptt file) strong 37 84
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11845 RidA family protein strong 35 82
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_931 Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ (TC 3.A.1.3.1) insig. 37 83
  Paraburkholderia graminis OAS925 ABIE53_004706 2-iminobutanoate/2-iminopropanoate deaminase sig. 35 84
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS02020 RidA family protein insig. 39 85
  Dinoroseobacter shibae DFL-12 Dshi_0720 Endoribonuclease L-PSP (RefSeq) sig. 37 84
  Paraburkholderia sabiae LMG 24235 QEN71_RS09865 RidA family protein insig. 34 84
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03549 reactive intermediate/imine deaminase insig. 33 84
  Erwinia tracheiphila SCR3 LU632_RS20960 ridA 2-iminobutanoate/2-iminopropanoate deaminase sig. 32 85
  Bacteroides ovatus ATCC 8483 BACOVA_00589 putative endoribonuclease L-PSP cofit 36 84
  Rhodanobacter sp. FW510-T8 OKGIIK_12095 ridA reactive intermediate/imine deaminase cofit 35 82
  Pectobacterium carotovorum WPP14 HER17_RS19520 2-iminobutanoate/2-iminopropanoate deaminase sig. 33 85
  Cupriavidus basilensis FW507-4G11 RR42_RS16710 endoribonuclease L-PSP insig. 33 83
  Lysobacter sp. OAE881 ABIE51_RS17260 RidA family protein strong 35 82
  Variovorax sp. OAS795 ABID97_RS26145 RidA family protein insig. 34 84
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3622 Bona fide RidA/YjgF/TdcF/RutC subgroup insig. 41 83
  Cupriavidus basilensis FW507-4G11 RR42_RS30085 hypothetical protein insig. 35 85
  Desulfovibrio vulgaris Hildenborough JW710 DVU2647 endoribonuclease, L-PSP family (TIGR) sig. 34 82
  Rhodanobacter denitrificans MT42 LRK55_RS11525 RidA family protein cofit 34 82
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11800 RidA family protein strong 34 82
  Desulfovibrio vulgaris Hildenborough JW710 DVU2203 endoribonuclease, L-PSP family (TIGR) sig. 34 84
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS16200 RidA family protein no data 32 82
  Ralstonia solanacearum UW163 UW163_RS16935 RidA family protein no data 32 82
  Pantoea sp. MT58 IAI47_16870 2-iminobutanoate/2-iminopropanoate deaminase strong 31 85
  Enterobacter asburiae PDN3 EX28DRAFT_3444 reactive intermediate/imine deaminase insig. 31 85
  Paraburkholderia sabiae LMG 24235 QEN71_RS41190 RidA family protein no data 37 82
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_179 Endoribonuclease L-PSP no data 36 83
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS17820 RidA family protein insig. 37 84
  Ralstonia solanacearum UW163 UW163_RS21320 RidA family protein insig. 37 84
  Azospirillum sp. SherDot2 MPMX19_04018 2-aminomuconate deaminase insig. 36 82
  Ralstonia sp. UNC404CL21Col ABZR87_RS23140 RidA family protein no data 31 82
  Desulfovibrio vulgaris Hildenborough JW710 DVU0620 endoribonuclease, L-PSP family (TIGR) insig. 35 78
  Escherichia coli BL21 ECD_04111 enamine/imine deaminase, reaction intermediate detoxification strong 32 85
  Escherichia fergusonii Becca EFB2_04290 2-iminobutanoate/2-iminopropanoate deaminase sig. 32 85
  Escherichia coli ECOR27 NOLOHH_04135 ridA 2-iminobutanoate/2-iminopropanoate deaminase insig. 32 85
  Escherichia coli ECOR38 HEPCGN_10070 ridA 2-iminobutanoate/2-iminopropanoate deaminase cofit 32 85
  Escherichia coli ECRC101 OKFHMN_11875 ridA 2-iminobutanoate/2-iminopropanoate deaminase insig. 32 85
  Escherichia coli ECRC101 MCAODC_02380 ridA 2-iminobutanoate/2-iminopropanoate deaminase sig. 32 85
  Escherichia coli ECRC102 NIAGMN_09725 ridA 2-iminobutanoate/2-iminopropanoate deaminase sig. 32 85
  Escherichia coli ECRC62 BNILDI_07375 ridA 2-iminobutanoate/2-iminopropanoate deaminase insig. 32 85
  Escherichia coli ECRC98 JDDGAC_15515 ridA 2-iminobutanoate/2-iminopropanoate deaminase no data 32 85
  Escherichia coli ECRC99 KEDOAH_16280 ridA 2-iminobutanoate/2-iminopropanoate deaminase no data 32 85
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03791 2-iminobutanoate/2-iminopropanoate deaminase insig. 32 85
  Escherichia coli Nissle 1917 ECOLIN_RS24615 2-iminobutanoate/2-iminopropanoate deaminase cofit 32 85
  Enterobacter sp. TBS_079 MPMX20_00542 2-iminobutanoate/2-iminopropanoate deaminase sig. 32 85
  Escherichia coli BW25113 b4243 yjgF orf, hypothetical protein (VIMSS) strong 32 85
  Azospirillum brasilense Sp245 AZOBR_RS26395 endoribonuclease insig. 35 95
  Rahnella sp. WP5 EX31_RS12775 2-iminobutanoate/2-iminopropanoate deaminase insig. 31 85
  Marinobacter adhaerens HP15 HP15_306 YjgF-like protein strong 35 70
  Ralstonia solanacearum PSI07 RPSI07_RS07500 RidA family protein no data 31 82
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF928 Endoribonuclease L-PSP strong 30 85