Homologs of Pf6N2E2_1978 from Pseudomonas fluorescens FW300-N2E2

DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster
SEED: DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster

152 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1978 DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster insig. 100 100
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2568.1 DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster insig. 67 97
  Pseudomonas syringae pv. syringae B728a Psyr_1473 DNA topoisomerase III insig. 61 96
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1473 DNA topoisomerase III insig. 61 96
  Pseudomonas fluorescens SBW25 PFLU_RS09715 DNA topoisomerase III insig. 63 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS09715 DNA topoisomerase III insig. 63 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_972 DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster insig. 60 91
  Pseudomonas fluorescens FW300-N2C3 AO356_00120 DNA topoisomerase III insig. 60 91
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_07605 topB DNA topoisomerase III no data 46 94
  Pseudomonas sp. SVBP6 COO64_RS23235 DNA topoisomerase III insig. 63 69
  Pseudomonas sp. BP01 JOY50_RS06610 DNA topoisomerase III insig. 60 70
  Pseudomonas putida KT2440 PP_4019 DNA topoisomerase III insig. 60 70
  Erwinia amylovora T8 OLJFJH_02895 DNA topoisomerase III insig. 41 91
  Pseudomonas stutzeri RCH2 Psest_1383 DNA topoisomerase III, bacteria and conjugative plasmid insig. 62 67
  Pseudomonas syringae pv. syringae B728a Psyr_2244 DNA topoisomerase III insig. 60 69
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2244 DNA topoisomerase III insig. 60 69
  Pseudomonas sp. RS175 PFR28_01342 DNA topoisomerase 3 insig. 58 69
  Pseudomonas simiae WCS417 PS417_10550 DNA topoisomerase III insig. 60 69
  Pseudomonas fluorescens FW300-N2C3 AO356_21700 DNA topoisomerase III insig. 59 69
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2100 DNA topoisomerase III (EC 5.99.1.2) insig. 59 69
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02205 DNA topoisomerase 3 cofit 60 69
  Dickeya dianthicola ME23 DZA65_RS04865 DNA topoisomerase III insig. 42 99
  Pseudomonas fluorescens SBW25 PFLU_RS10610 DNA topoisomerase III cofit 60 69
  Pseudomonas fluorescens SBW25-INTG PFLU_RS10610 DNA topoisomerase III insig. 60 69
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4446 DNA topoisomerase III (EC 5.99.1.2) insig. 60 69
  Pseudomonas orientalis W4I3 QF045_RS12525 DNA topoisomerase III cofit 61 67
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3568 DNA topoisomerase III (EC 5.99.1.2) insig. 61 67
  Pseudomonas sp. DMC3 GFF1711 DNA topoisomerase 3 insig. 61 65
  Pseudomonas fluorescens FW300-N2E3 AO353_26780 DNA topoisomerase III insig. 59 69
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_03760 DNA topoisomerase 3 no data 41 98
  Marinobacter adhaerens HP15 HP15_1186 DNA topoisomerase III insig. 39 88
  Cupriavidus basilensis FW507-4G11 RR42_RS24470 hypothetical protein insig. 38 87
  Marinobacter adhaerens HP15 HP15_p42g25 DNA topoisomerase III insig. 34 97
  Klebsiella pneumoniae MRSN742743 GJGHJB_02995 topA DNA topoisomerase 3 insig. 41 68
  Klebsiella pneumoniae MKP103 KDGMDA_19285 DNA topoisomerase III insig. 41 68
  Pectobacterium carotovorum WPP14 HER17_RS11095 DNA topoisomerase III insig. 38 75
  Dickeya dadantii 3937 DDA3937_RS10300 DNA topoisomerase III insig. 40 63
  Dickeya dianthicola 67-19 HGI48_RS10310 DNA topoisomerase III insig. 40 63
  Dickeya dianthicola ME23 DZA65_RS10785 DNA topoisomerase III insig. 40 63
  Serratia liquefaciens MT49 IAI46_14305 DNA topoisomerase III insig. 36 75
  Enterobacter asburiae PDN3 EX28DRAFT_1764 DNA topoisomerase III, bacteria and conjugative plasmid insig. 41 63
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3486 DNA topoisomerase III (EC 5.99.1.2) insig. 38 68
  Enterobacter sp. TBS_079 MPMX20_01853 DNA topoisomerase 3 insig. 38 68
  Escherichia fergusonii Becca EFB2_02231 DNA topoisomerase 3 insig. 37 68
  Escherichia coli ECOR38 HEPCGN_05200 topB DNA topoisomerase III insig. 37 68
  Escherichia coli Nissle 1917 ECOLIN_RS09830 DNA topoisomerase III no data 39 63
  Erwinia amylovora T8 OLJFJH_13255 DNA topoisomerase III insig. 39 69
  Klebsiella michiganensis M5al BWI76_RS11605 DNA topoisomerase III insig. 39 63
  Shewanella sp. ANA-3 Shewana3_1486 DNA topoisomerase III (RefSeq) insig. 38 61
  Rahnella sp. WP5 EX31_RS06315 DNA topoisomerase III insig. 37 70
  Escherichia coli ECRC100 OKFHMN_26830 topB DNA topoisomerase III cofit 38 63
  Escherichia coli ECRC101 MCAODC_18580 topB DNA topoisomerase III insig. 38 63
  Escherichia coli ECRC102 NIAGMN_01235 topB DNA topoisomerase III cofit 38 63
  Escherichia coli ECRC98 JDDGAC_01405 topB DNA topoisomerase III cofit 38 63
  Escherichia coli ECRC99 KEDOAH_01280 topB DNA topoisomerase III no data 38 63
  Escherichia coli BL21 ECD_01732 DNA topoisomerase III cofit 38 63
  Escherichia coli ECOR27 NOLOHH_17340 topB DNA topoisomerase III insig. 38 63
  Escherichia coli ECRC62 BNILDI_16125 topB DNA topoisomerase III insig. 38 63
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01969 DNA topoisomerase 3 insig. 38 63
  Escherichia coli BW25113 b1763 topB DNA topoisomerase III (NCBI) strong 38 63
  Shewanella oneidensis MR-1 SO3061 topB DNA topoisomerase III (NCBI ptt file) insig. 37 61
  Shewanella amazonensis SB2B Sama_2145 DNA topoisomerase III (RefSeq) sig. 40 61
  Pantoea sp. MT58 IAI47_08980 DNA topoisomerase III insig. 38 69
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_22650 topB DNA topoisomerase III no data 40 62
  Erwinia tracheiphila SCR3 LU632_RS12960 DNA topoisomerase III insig. 40 62
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS09115 DNA topoisomerase III cofit 38 69
  Shewanella loihica PV-4 Shew_2299 DNA topoisomerase III (RefSeq) insig. 40 54
  Desulfovibrio vulgaris Miyazaki F DvMF_3176 DNA topoisomerase III (RefSeq) insig. 31 85
  Vibrio cholerae E7946 ATCC 55056 CSW01_10220 DNA topoisomerase III cofit 36 62
  Castellaniella sp019104865 MT123 ABCV34_RS12290 DNA topoisomerase III no data 32 82
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2495 DNA topoisomerase III, Burkholderia type (EC 5.99.1.2) strong 30 82
  Erwinia tracheiphila SCR3 LU632_RS04885 topoisomerase DNA-binding C4 zinc finger domain-containing protein insig. 42 43
  Ralstonia sp. UNC404CL21Col ABZR87_RS04995 DNA topoisomerase III strong 32 75
  Herbaspirillum seropedicae SmR1 HSERO_RS23390 DNA topoisomerase III no data 27 92
  Paraburkholderia sabiae LMG 24235 QEN71_RS00140 DNA topoisomerase III no data 30 82
  Escherichia coli ECOR27 NOLOHH_00255 topB DNA topoisomerase III insig. 31 70
  Dechlorosoma suillum PS Dsui_0821 DNA topoisomerase III no data 31 75
  Desulfovibrio vulgaris Hildenborough JW710 DVU2316 topB DNA topoisomerase III (TIGR) insig. 32 72
  Burkholderia phytofirmans PsJN BPHYT_RS01440 DNA topoisomerase III no data 31 75
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02244 DNA topoisomerase-3 no data 31 75
  Paraburkholderia graminis OAS925 ABIE53_000384 DNA topoisomerase-3 no data 31 75
  Cupriavidus basilensis FW507-4G11 RR42_RS20490 DNA topoisomerase III no data 30 82
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09790 type IA DNA topoisomerase sig. 34 77
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08935 type IA DNA topoisomerase insig. 34 77
  Azospirillum sp. SherDot2 MPMX19_01540 DNA topoisomerase 3 insig. 32 67
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09745 DNA topoisomerase III no data 31 75
  Ralstonia solanacearum GMI1000 RS_RS00330 DNA topoisomerase III no data 31 75
  Ralstonia solanacearum PSI07 RPSI07_RS23620 DNA topoisomerase III no data 31 75
  Ralstonia solanacearum UW163 UW163_RS03835 DNA topoisomerase III no data 31 75
  Escherichia coli ECOR38 HEPCGN_00150 topB DNA topoisomerase III insig. 31 70
  Phocaeicola dorei CL03T12C01 ABI39_RS08715 type IA DNA topoisomerase insig. 30 90
  Rhodopseudomonas palustris CGA009 TX73_021440 DNA topoisomerase insig. 38 49
  Bacteroides thetaiotaomicron VPI-5482 BT0105 DNA topoisomerase I (Omega-protein) (NCBI ptt file) sig. 31 71
  Acidovorax sp. GW101-3H11 Ac3H11_1268 DNA topoisomerase III, Burkholderia type (EC 5.99.1.2) insig. 30 75
  Desulfovibrio vulgaris Miyazaki F DvMF_2069 DNA topoisomerase I (RefSeq) no data 31 75
  Azospirillum brasilense Sp245 AZOBR_RS10830 DNA topoisomerase III sig. 31 69
  Desulfovibrio vulgaris Hildenborough JW710 DVU3389 topA DNA topoisomerase I (TIGR) no data 28 75
  Bacteroides thetaiotaomicron VPI-5482 BT2324 DNA topoisomerase III (NCBI ptt file) insig. 31 71
  Bacteroides stercoris CC31F HMPREF1181_RS11415 type IA DNA topoisomerase insig. 30 73
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02650 DNA topoisomerase III sig. 27 91
  Bifidobacterium breve UCC2003 BBR_RS16225 type IA DNA topoisomerase insig. 30 82
  Variovorax sp. SCN45 GFF5383 DNA topoisomerase III, Burkholderia type (EC 5.99.1.2) cofit 27 82
  Variovorax sp. OAS795 ABID97_RS02310 DNA topoisomerase III no data 26 82
  Cellulophaga baltica 18 M666_RS01325 DNA topoisomerase 3 insig. 31 63
  Bacteroides stercoris CC31F HMPREF1181_RS09915 type IA DNA topoisomerase insig. 30 71
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08865 type IA DNA topoisomerase insig. 34 73
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3239 Topoisomerase IA insig. 31 61
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01110 DNA topoisomerase 3 cofit 30 69
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3808 DNA topoisomerase III, bacteria and conjugative plasmid insig. 29 62
  Bacteroides ovatus ATCC 8483 BACOVA_01501 DNA topoisomerase insig. 36 49
  Bacteroides stercoris CC31F HMPREF1181_RS08375 DNA topoisomerase 3 no data 31 59
  Phocaeicola dorei CL03T12C01 ABI39_RS16120 type IA DNA topoisomerase insig. 28 74
  Shewanella sp. ANA-3 Shewana3_1729 DNA topoisomerase I (RefSeq) no data 29 73
  Shewanella loihica PV-4 Shew_2224 DNA topoisomerase I (RefSeq) no data 27 73
  Bacteroides thetaiotaomicron VPI-5482 BT2089 DNA topoisomerase III (NCBI ptt file) no data 30 59
  Bacteroides ovatus ATCC 8483 BACOVA_03290 DNA topoisomerase insig. 30 59
  Shewanella oneidensis MR-1 SO2705 topA DNA topoisomerase I (NCBI ptt file) no data 29 73
  Methanococcus maripaludis JJ MMJJ_RS00180 DNA topoisomerase I strong 24 81
  Methanococcus maripaludis S2 MMP_RS04955 DNA topoisomerase I strong 24 81
  Caulobacter crescentus NA1000 CCNA_02535 DNA topoisomerase I insig. 27 75
  Caulobacter crescentus NA1000 Δfur CCNA_02535 DNA topoisomerase I no data 27 75
  Rhodopseudomonas palustris CGA009 TX73_016155 type I DNA topoisomerase strong 25 79
  Phocaeicola dorei CL03T12C01 ABI39_RS09935 DNA topoisomerase 3 cofit 30 59
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14305 DNA topoisomerase 3 insig. 30 59
  Bifidobacterium breve UCC2003 BBR_RS11185 type I DNA topoisomerase sig. 37 43
  Bacteroides thetaiotaomicron VPI-5482 BT2644 DNA topoisomerase I (NCBI ptt file) insig. 33 49
  Rhodanobacter sp. FW510-T8 OKGIIK_04145 Restriction endonuclease insig. 46 25
  Dechlorosoma suillum PS Dsui_2608 topoisomerase IA cofit 25 82
  Dechlorosoma suillum PS Dsui_2608 topoisomerase IA cofit 39 28
  Sinorhizobium meliloti 1021 SMc01364 DNA topoisomerase I insig. 28 74
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2395 Similar to C-terminal Zn-finger domain of DNA topoisomerase I insig. 53 21
  Acinetobacter radioresistens SK82 MPMX26_00365 DNA topoisomerase 1 no data 25 78
  Rahnella sp. WP5 EX31_RS15960 hypothetical protein insig. 49 21
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07650 DNA topoisomerase III sig. 29 65
  Pseudomonas sp. S08-1 OH686_21940 DNA topoisomerase I no data 25 73
  Dinoroseobacter shibae DFL-12 Dshi_1708 NERD domain protein (RefSeq) insig. 50 19
  Pseudomonas stutzeri RCH2 Psest_2737 Restriction endonuclease insig. 49 17
  Serratia liquefaciens MT49 IAI46_23250 topoisomerase DNA-binding C4 zinc finger domain-containing protein insig. 47 21
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04230 type I DNA topoisomerase no data 27 79
  Enterobacter asburiae PDN3 EX28DRAFT_0044 Zn-finger domain associated with topoisomerase type I cofit 50 21
  Enterobacter sp. TBS_079 MPMX20_04191 DNA topoisomerase 1 sig. 50 21
  Acinetobacter baumannii LAC-4 RR41_RS16785 type I DNA topoisomerase no data 25 78
  Ralstonia solanacearum GMI1000 RS_RS17120 hypothetical protein insig. 47 18
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2015 Putative chaperonin insig. 46 19
  Synechocystis sp000284455 PCC 6803 SGL_RS08530 type I DNA topoisomerase no data 31 39
  Klebsiella michiganensis M5al BWI76_RS25655 DNA topoisomerase type IA zn finger domain-containing protein sig. 47 21
  Ralstonia sp. UNC404CL21Col ABZR87_RS16825 restriction endonuclease insig. 38 29
  Vibrio cholerae E7946 ATCC 55056 CSW01_00255 DNA topoisomerase insig. 52 19
  Synechococcus elongatus PCC 7942 Synpcc7942_1416 topA DNA topoisomerase I no data 24 71
  Klebsiella pneumoniae MKP103 KDGMDA_06525 Uncharacterized protein YrdD insig. 47 21
  Klebsiella pneumoniae MRSN742743 GJGHJB_00431 yrdD DNA topoisomerase type IA zn finger domain-containing protein insig. 47 21
  Azospirillum brasilense Sp245 AZOBR_RS33195 hypothetical protein insig. 33 49