Homologs of PP_3496 from Pseudomonas putida KT2440

Endoribonuclease L-PSP
SEED: Putative translation initiation inhibitor, yjgF family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_3496 Endoribonuclease L-PSP insig. 100 100
o Pseudomonas sp. BP01 JOY50_RS06060 RidA family protein insig. 99 95
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4335 Putative translation initiation inhibitor, yjgF family insig. 85 95
o Pseudomonas sp. DMC3 GFF2969 hypothetical protein insig. 82 95
o Pseudomonas sp. SVBP6 COO64_RS08145 RidA family protein insig. 85 95
o Pseudomonas sp. RS175 PFR28_02576 Putative aminoacrylate peracid reductase RutC insig. 84 95
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3580 Bona fide RidA/YjgF/TdcF/RutC subgroup insig. 82 95
o Pseudomonas syringae pv. syringae B728a Psyr_4327 Endoribonuclease L-PSP insig. 85 95
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4327 Endoribonuclease L-PSP insig. 85 95
o Pseudomonas fluorescens SBW25 PFLU_RS15165 RidA family protein insig. 85 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS15165 RidA family protein insig. 85 95
o Pseudomonas fluorescens FW300-N2E3 AO353_29065 reactive intermediate/imine deaminase insig. 84 95
o Pseudomonas orientalis W4I3 QF045_RS16345 RidA family protein cofit 84 95
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03079 2-iminobutanoate/2-iminopropanoate deaminase cofit 84 95
o Pseudomonas simiae WCS417 PS417_13675 endoribonuclease L-PSP insig. 82 95
o Pseudomonas fluorescens FW300-N2C3 AO356_22325 reactive intermediate/imine deaminase insig. 82 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_331 Putative translation initiation inhibitor, yjgF family insig. 80 97
  Pseudomonas sp. BP01 JOY50_RS05205 RidA family protein no data 68 92
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3734 Bona fide RidA/YjgF/TdcF/RutC subgroup insig. 44 76
  Desulfovibrio vulgaris Hildenborough JW710 DVU2203 endoribonuclease, L-PSP family (TIGR) sig. 41 75
  Pseudomonas sp. BP01 JOY50_RS03005 RidA family protein no data 45 75
  Pseudomonas putida KT2440 PP_2689 putative Endoribonuclease insig. 46 75
  Serratia liquefaciens MT49 IAI46_16435 RidA family protein insig. 40 74
  Shewanella oneidensis MR-1 SO1404 endoribonuclease L-PSP, putative (NCBI ptt file) insig. 41 75
  Shewanella sp. ANA-3 Shewana3_2971 putative endoribonuclease L-PSP (RefSeq) sig. 39 75
  Sinorhizobium meliloti 1021 SM_b20377 translation initiation inhibitor protein insig. 40 64
  Pseudomonas sp. S08-1 OH686_13545 RidA/YER057c/UK114 superfamily protein strong 40 72
  Pseudomonas aeruginosa MRSN321 DY961_RS12585 RidA family protein strong 38 74
  Pseudomonas aeruginosa PA14 IKLFDK_26760 reactive intermediate/imine deaminase strong 38 74
  Pseudomonas aeruginosa PUPa3 DQ20_RS49540 RidA family protein strong 38 74
  Pseudomonas sp. SVBP6 COO64_RS09615 RidA family protein insig. 39 73
  Cupriavidus basilensis FW507-4G11 RR42_RS16710 endoribonuclease L-PSP insig. 41 61
  Marinobacter adhaerens HP15 HP15_2596 endoribonuclease L-PSP insig. 34 64
  Pseudomonas putida KT2440 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase strong 37 74
  Sinorhizobium meliloti 1021 SM_b20376 hypothetical protein insig. 40 67
  Pseudomonas stutzeri RCH2 Psest_3818 endoribonuclease L-PSP, putative strong 38 74
  Pseudomonas sp. BP01 JOY50_RS08980 RidA family protein cofit 37 74
  Cupriavidus basilensis FW507-4G11 RR42_RS05130 2-aminomuconate deaminase insig. 39 66
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1670 Putative translation initiation inhibitor, yjgF family insig. 36 74
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4360 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 36 74
  Pseudomonas sp. DMC3 GFF420 2-iminobutanoate/2-iminopropanoate deaminase strong 35 74
  Pseudomonas sp. RS175 PFR28_04425 2-iminobutanoate/2-iminopropanoate deaminase strong 35 74
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2112 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 35 74
  Pseudomonas fluorescens FW300-N2C3 AO356_12475 reactive intermediate/imine deaminase strong 35 74
  Pseudomonas sp. SVBP6 COO64_RS01560 RidA family protein strong 35 74
  Pseudomonas fluorescens GW456-L13 PfGW456L13_779 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 35 74
  Pseudomonas fluorescens FW300-N2E3 AO353_09285 reactive intermediate/imine deaminase strong 35 74
  Pseudomonas fluorescens SBW25 PFLU_RS29515 RidA family protein strong 35 74
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29515 RidA family protein strong 35 74
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00035 2-iminobutanoate/2-iminopropanoate deaminase strong 35 74
  Pseudomonas orientalis W4I3 QF045_RS02190 RidA family protein strong 35 74
  Pseudomonas simiae WCS417 PS417_27835 endoribonuclease strong 35 74
  Pseudomonas segetis P6 ACVTMO_RS00185 RidA family protein strong 36 74
  Burkholderia phytofirmans PsJN BPHYT_RS03130 hypothetical protein insig. 35 87
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS02020 RidA family protein insig. 38 68
  Desulfovibrio vulgaris Hildenborough JW710 DVU0620 endoribonuclease, L-PSP family (TIGR) insig. 39 64
  Dechlorosoma suillum PS Dsui_0312 endoribonuclease L-PSP, putative no data 45 59
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06511 reactive intermediate/imine deaminase insig. 37 80
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17245 RidA family protein no data 38 75
  Pseudomonas syringae pv. syringae B728a Psyr_0208 endoribonuclease L-PSP strong 36 74
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0208 endoribonuclease L-PSP strong 36 74
  Paraburkholderia sabiae LMG 24235 QEN71_RS01965 RidA family protein insig. 35 87
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18400 RidA family protein strong 33 91
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11845 RidA family protein strong 36 74
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1205.1 hypothetical protein cofit 36 74
  Pseudomonas aeruginosa MRSN321 DY961_RS01310 RidA family protein sig. 37 73
  Pseudomonas aeruginosa PA14 IKLFDK_15890 enamine deaminase RidA insig. 37 73
  Pseudomonas aeruginosa PUPa3 DQ20_RS34245 RidA family protein insig. 37 73
  Burkholderia phytofirmans PsJN BPHYT_RS15355 endoribonuclease L-PSP insig. 36 80
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22825 reactive intermediate/imine deaminase strong 34 75
  Pseudomonas sp. DMC3 GFF3667 2-iminobutanoate/2-iminopropanoate deaminase no data 34 89
  Phocaeicola dorei CL03T12C01 ABI39_RS14715 RidA family protein strong 33 91
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01890 reactive intermediate/imine deaminase insig. 34 87
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5641 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 33 89
  Paraburkholderia graminis OAS925 ABIE53_000758 reactive intermediate/imine deaminase strong 36 76
  Variovorax sp. OAS795 ABID97_RS22895 RidA family protein insig. 30 87
  Cupriavidus basilensis FW507-4G11 RR42_RS34135 hypothetical protein insig. 32 92
  Ralstonia sp. UNC404CL21Col ABZR87_RS05790 RidA family protein insig. 38 80
  Lysobacter sp. OAE881 ABIE51_RS17260 RidA family protein strong 37 73
  Pseudomonas sp. BP01 JOY50_RS25415 RidA family protein insig. 35 73
  Marinobacter adhaerens HP15 HP15_306 YjgF-like protein strong 35 73
  Variovorax sp. SCN45 GFF6707 RidA/YER057c/UK114 superfamily protein insig. 34 75
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2865 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 34 89
  Pseudomonas syringae pv. syringae B728a Psyr_2507 Endoribonuclease L-PSP sig. 32 89
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2507 Endoribonuclease L-PSP insig. 32 89
  Bacteroides thetaiotaomicron VPI-5482 BT1336 putative translation initiation inhibitor (NCBI ptt file) strong 34 86
  Pseudomonas fluorescens FW300-N2E3 AO353_21730 reactive intermediate/imine deaminase no data 33 89
  Pseudomonas putida KT2440 PP_2247 putative Endoribonuclease insig. 32 90
  Sinorhizobium meliloti 1021 SMa2289 hypothetical protein insig. 32 89
  Bacteroides stercoris CC31F HMPREF1181_RS10885 RidA family protein strong 33 86
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS12635 RidA family protein insig. 36 76
  Pectobacterium carotovorum WPP14 HER17_RS19520 2-iminobutanoate/2-iminopropanoate deaminase sig. 29 76
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2824 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein insig. 37 85
  Paraburkholderia sabiae LMG 24235 QEN71_RS41190 RidA family protein no data 34 89
  Shewanella amazonensis SB2B Sama_0263 YjgF-like protein (RefSeq) strong 35 70
  Bacteroides ovatus ATCC 8483 BACOVA_00589 putative endoribonuclease L-PSP cofit 34 86
  Variovorax sp. SCN45 GFF3442 RidA/YER057c/UK114 superfamily protein insig. 39 67
  Burkholderia phytofirmans PsJN BPHYT_RS29300 endoribonuclease L-PSP insig. 36 80
  Kangiella aquimarina DSM 16071 B158DRAFT_0573 endoribonuclease L-PSP, putative sig. 29 76
  Desulfovibrio vulgaris Miyazaki F DvMF_1512 endoribonuclease L-PSP (RefSeq) no data 34 73