Homologs of PP_0975 from Pseudomonas putida KT2440

putative DNA-binding protein HU, form N
SEED: DNA-binding protein HU-beta
KEGG: DNA-binding protein HU-beta

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
o Pseudomonas sp. BP01 JOY50_RS11240 HU family DNA-binding protein insig. 100 100
  Pseudomonas putida KT2440 PP_0975 putative DNA-binding protein HU, form N no data 100 100
o Pseudomonas sp. SVBP6 COO64_RS04390 HU family DNA-binding protein insig. 91 100
o Pseudomonas sp. RS175 PFR28_03533 DNA-binding protein HU 1 insig. 89 100
o Pseudomonas syringae pv. syringae B728a Psyr_1084 Histone-like bacterial DNA-binding protein no data 87 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1084 Histone-like bacterial DNA-binding protein insig. 87 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1709 DNA-binding protein HU-beta no data 87 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_904 DNA-binding protein HU-beta strong 87 100
o Pseudomonas fluorescens FW300-N2E3 AO353_04560 dipicolinate synthase no data 87 100
o Pseudomonas fluorescens FW300-N2C3 AO356_17445 dipicolinate synthase no data 87 100
o Pseudomonas sp. DMC3 GFF1947 DNA-binding protein HRm no data 86 100
o Pseudomonas orientalis W4I3 QF045_RS08130 HU family DNA-binding protein insig. 86 100
o Pseudomonas simiae WCS417 PS417_05140 dipicolinate synthase strong 86 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5415 DNA-binding protein HU-beta no data 82 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01234 DNA-binding protein HRm cofit 78 100
o Pseudomonas fluorescens SBW25 PFLU_RS05210 HU family DNA-binding protein insig. 77 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS05210 HU family DNA-binding protein strong 77 100
o Pseudomonas segetis P6 ACVTMO_RS11060 HU family DNA-binding protein sig. 77 99
o Pseudomonas aeruginosa MRSN321 DY961_RS13160 HU family DNA-binding protein insig. 78 99
o Pseudomonas aeruginosa PA14 IKLFDK_20325 HU family DNA-binding protein insig. 78 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS48480 HU family DNA-binding protein insig. 78 99
o Pseudomonas sp. S08-1 OH686_02500 DNA-binding protein HU, form N insig. 67 100
o Desulfovibrio vulgaris Miyazaki F DvMF_2029 histone family protein DNA-binding protein (RefSeq) no data 45 98
  Caulobacter crescentus NA1000 CCNA_02416 DNA-binding protein HU strong 52 78
  Caulobacter crescentus NA1000 Δfur CCNA_02416 DNA-binding protein HU cofit 52 78
o Dinoroseobacter shibae DFL-12 Dshi_3288 histone family protein DNA-binding protein (RefSeq) no data 48 97
o Bosea sp. OAE506 ABIE41_RS21840 HU family DNA-binding protein no data 47 96
  Sinorhizobium meliloti 1021 SMc01906 histone-like protein no data 41 97
  Azospirillum brasilense Sp245 AZOBR_RS23140 transcriptional regulator no data 46 97
  Shewanella loihica PV-4 Shew_0430 histone family protein DNA-binding protein (RefSeq) sig. 43 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS21970 HU family DNA-binding protein insig. 48 97
  Azospirillum brasilense Sp245 AZOBR_RS33080 transcriptional regulator no data 46 97
  Burkholderia phytofirmans PsJN BPHYT_RS09465 transcriptional regulator insig. 47 97
  Acidovorax sp. GW101-3H11 Ac3H11_376 DNA-binding protein HU-beta insig. 47 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00899 bacterial nucleoid protein Hbs no data 47 97
  Paraburkholderia graminis OAS925 ABIE53_002118 DNA-binding protein HU-beta sig. 47 97
  Desulfovibrio vulgaris Hildenborough JW710 DVU0764 hup-2 DNA-binding protein HU (TIGR) sig. 45 97
  Azospirillum sp. SherDot2 MPMX19_01544 DNA-binding protein HU no data 42 97
o Phaeobacter inhibens DSM 17395 PGA1_c34260 DNA-binding protein HU-beta no data 41 97
  Desulfovibrio vulgaris Miyazaki F DvMF_2799 histone family protein DNA-binding protein (RefSeq) strong 44 97
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3853 DNA-binding protein HU-beta strong 43 97
  Variovorax sp. OAS795 ABID97_RS10665 HU family DNA-binding protein no data 44 97
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS01335 HU family DNA-binding protein no data 43 97
  Ralstonia solanacearum GMI1000 RS_RS08660 HU family DNA-binding protein no data 43 97
  Ralstonia solanacearum PSI07 RPSI07_RS16140 HU family DNA-binding protein no data 43 97
  Ralstonia solanacearum UW163 UW163_RS14645 HU family DNA-binding protein no data 43 97
  Marinobacter adhaerens HP15 HP15_2182 histone-like bacterial DNA-binding protein no data 46 96
  Ralstonia sp. UNC404CL21Col ABZR87_RS12780 HU family DNA-binding protein insig. 43 97
  Shewanella oneidensis MR-1 SO0548 DNA-binding protein, HU family (NCBI ptt file) insig. 41 97
  Magnetospirillum magneticum AMB-1 AMB_RS05070 HU family DNA-binding protein no data 41 97
  Magnetospirillum magneticum AMB-1 AMB_RS10490 HU family DNA-binding protein no data 41 97
  Variovorax sp. SCN45 GFF2853 DNA-binding protein HU-beta insig. 44 97
  Shewanella sp. ANA-3 Shewana3_0547 histone family protein DNA-binding protein (RefSeq) cofit 41 97
  Pseudomonas sp. BP01 JOY50_RS19670 HU family DNA-binding protein no data 41 97
  Rahnella sp. WP5 EX31_RS22260 DNA-binding protein HU-beta insig. 47 97
  Dechlorosoma suillum PS Dsui_2199 bacterial nucleoid DNA-binding protein cofit 46 97
  Castellaniella sp019104865 MT123 ABCV34_RS06640 HU family DNA-binding protein no data 44 97
  Kangiella aquimarina DSM 16071 B158DRAFT_1039 Bacterial nucleoid DNA-binding protein strong 43 97
  Azospirillum brasilense Sp245 AZOBR_RS07150 transcriptional regulator no data 42 96
  Magnetospirillum magneticum AMB-1 AMB_RS04760 HU family DNA-binding protein no data 40 97
  Pseudomonas fluorescens SBW25 PFLU_RS19155 HU family DNA-binding protein no data 44 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19155 HU family DNA-binding protein no data 44 97
  Pseudomonas orientalis W4I3 QF045_RS18885 HU family DNA-binding protein no data 44 97
  Pseudomonas simiae WCS417 PS417_17220 transcriptional regulator HU subunit alpha no data 44 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5425 DNA-binding protein HU-beta insig. 43 98
  Enterobacter asburiae PDN3 EX28DRAFT_2530 Bacterial nucleoid DNA-binding protein cofit 47 97
  Enterobacter sp. TBS_079 MPMX20_01031 DNA-binding protein HU-beta strong 47 97
  Klebsiella michiganensis M5al BWI76_RS06540 DNA-binding protein HU-beta strong 47 97
  Klebsiella pneumoniae MKP103 KDGMDA_14625 DNA-binding protein HU-beta sig. 47 97
  Serratia liquefaciens MT49 IAI46_05025 DNA-binding protein HU-beta sig. 46 97
o Agrobacterium fabrum C58 Atu6120 HNS-type DNA binding protein insig. 44 88
  Vibrio cholerae E7946 ATCC 55056 CSW01_01405 DNA-binding protein HU-alpha cofit 48 96
  Desulfovibrio vulgaris Miyazaki F DvMF_0500 histone family protein DNA-binding protein (RefSeq) insig. 45 96
  Pseudomonas aeruginosa MRSN321 DY961_RS20745 hupB;inference=COORDINATES nucleoid-associated protein HU-beta no data 46 97
  Pseudomonas aeruginosa PA14 IKLFDK_08765 DNA-binding protein HU-beta no data 46 97
  Pseudomonas aeruginosa PUPa3 DQ20_RS54825 hupB;inference=COORDINATES nucleoid-associated protein HU-beta no data 46 97
  Pseudomonas sp. S08-1 OH686_03630 DNA-binding protein HU-beta no data 46 97
  Alteromonas macleodii MIT1002 MIT1002_02756 hypothetical protein no data 43 97
  Escherichia coli BL21 ECD_00392 HU, DNA-binding transcriptional regulator, beta subunit strong 46 97
  Escherichia fergusonii Becca EFB2_03617 DNA-binding protein HU-beta insig. 46 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03233 DNA-binding protein HU-beta strong 46 97
  Escherichia coli BW25113 b0440 hupB HU, DNA-binding transcriptional regulator, beta subunit (NCBI) strong 46 97
  Magnetospirillum magneticum AMB-1 AMB_RS11020 HU family DNA-binding protein insig. 40 97
  Pseudomonas putida KT2440 PP_2303 DNA binding regulator, beta subunit B no data 46 97
  Pseudomonas stutzeri RCH2 Psest_2284 Bacterial nucleoid DNA-binding protein no data 46 97
  Cellulophaga baltica 18 M666_RS13375 HU family DNA-binding protein no data 44 97
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS10555 DNA-binding protein HU-beta cofit 44 97
o Sphingobium sp. HT1-2 GFF4200 Integration host factor alpha subunit insig. 45 89
  Escherichia coli Nissle 1917 ECOLIN_RS02640 nucleoid-associated protein HU-beta sig. 46 97
  Erwinia tracheiphila SCR3 LU632_RS18330 hupB DNA-binding protein HU-beta insig. 46 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4356 DNA-binding protein HU-beta cofit 46 97
  Ralstonia sp. UNC404CL21Col ABZR87_RS00650 HU family DNA-binding protein no data 43 97
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS05030 HU family DNA-binding protein no data 43 97
  Ralstonia solanacearum GMI1000 RS_RS12640 HU family DNA-binding protein no data 43 97
  Ralstonia solanacearum PSI07 RPSI07_RS12265 HU family DNA-binding protein no data 43 97
  Ralstonia solanacearum UW163 UW163_RS08595 HU family DNA-binding protein no data 43 97
  Escherichia coli ECOR27 NOLOHH_01250 hupB DNA-binding protein HU-beta cofit 46 97
  Escherichia coli ECOR38 HEPCGN_06930 hupB DNA-binding protein HU-beta insig. 46 97
  Escherichia coli ECRC100 OKFHMN_08315 hupB DNA-binding protein HU-beta cofit 46 97
  Escherichia coli ECRC101 MCAODC_27540 hupB DNA-binding protein HU-beta sig. 46 97