| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS00510 | | class I SAM-dependent methyltransferase | insig. | 100 | 100 |
| o | Rhodanobacter sp. FW510-T8 | OKGIIK_14715 | | Biotin synthase | insig. | 84 | 100 |
| o | Rhodanobacter denitrificans MT42 | LRK55_RS04905 | | class I SAM-dependent methyltransferase | insig. | 77 | 97 |
| o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05125 | | class I SAM-dependent methyltransferase | insig. | 77 | 97 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS04705 | | class I SAM-dependent methyltransferase | insig. | 73 | 99 |
| o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3167.1 | | biotin synthesis protein | insig. | 70 | 99 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS04375 | | class I SAM-dependent methyltransferase | insig. | 28 | 91 |
| | Agrobacterium fabrum C58 | Atu1041 | | methyltransferase | insig. | 28 | 83 |
| | Enterobacter sp. TBS_079 | MPMX20_03533 | | Trans-aconitate 2-methyltransferase | insig. | 38 | 52 |
| | Pseudomonas sp. DMC3 | GFF3116 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 33 | 59 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0427 | | conserved hypothetical protein | insig. | 43 | 44 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0427 | | conserved hypothetical protein | insig. | 43 | 44 |
| | Serratia liquefaciens MT49 | IAI46_06535 | | malonyl-ACP O-methyltransferase BioC | insig. | 37 | 66 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS03780 | | malonyl-ACP O-methyltransferase BioC | cofit | 40 | 54 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03967 | | Methylase involved in ubiquinone/menaquinone biosynthesis | insig. | 29 | 80 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2743 | | Methyltransferase domain | insig. | 31 | 78 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_248 | | FIG025233: SAM-dependent methyltransferases | insig. | 41 | 44 |
| | Pectobacterium carotovorum WPP14 | HER17_RS13450 | | malonyl-ACP O-methyltransferase BioC | cofit | 42 | 48 |
| | Enterobacter sp. TBS_079 | MPMX20_01405 | | Malonyl-[acyl-carrier protein] O-methyltransferase | sig. | 36 | 55 |
| | Klebsiella michiganensis M5al | BWI76_RS19545 | | type 11 methyltransferase | no data | 34 | 63 |
| | Ralstonia solanacearum GMI1000 | RS_RS18860 | | class I SAM-dependent methyltransferase | insig. | 31 | 78 |
| | Pantoea sp. MT58 | IAI47_13520 | | malonyl-ACP O-methyltransferase BioC | insig. | 40 | 54 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_09200 | | methyltransferase | insig. | 39 | 44 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS07135 | | methyltransferase | insig. | 34 | 64 |
| | Pseudomonas sp. RS175 | PFR28_05026 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 39 | 44 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS18760 | | glycosyltransferase | strong | 39 | 45 |
| | Paraburkholderia graminis OAS925 | ABIE53_003194 | | ubiquinone/menaquinone biosynthesis C-methylase UbiE | insig. | 33 | 59 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS15110 | | methyltransferase | insig. | 28 | 80 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2579 | | transcriptional regulator, ArsR family (RefSeq) | no data | 42 | 48 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1515 | | FIG025233: SAM-dependent methyltransferases | insig. | 38 | 44 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS03890 | | class I SAM-dependent methyltransferase | insig. | 31 | 59 |
| | Pseudomonas sp. S08-1 | OH686_09950 | | SAM-dependent | cofit | 40 | 44 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3724 | | FIG025233: SAM-dependent methyltransferases | insig. | 30 | 59 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_12630 | | methyltransferase | insig. | 30 | 59 |
| | Erwinia amylovora T8 | OLJFJH_16750 | | malonyl-ACP O-methyltransferase BioC | insig. | 41 | 44 |
| | Dickeya dianthicola 67-19 | HGI48_RS08685 | | malonyl-ACP O-methyltransferase BioC | insig. | 34 | 52 |
| | Escherichia fergusonii Becca | EFB2_03328 | | Malonyl-[acyl-carrier protein] O-methyltransferase | insig. | 38 | 54 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS04140 | | malonyl-ACP O-methyltransferase BioC | insig. | 38 | 54 |
| | Dickeya dianthicola ME23 | DZA65_RS08975 | | malonyl-ACP O-methyltransferase BioC | insig. | 34 | 52 |
| | Dickeya dadantii 3937 | DDA3937_RS08520 | | malonyl-ACP O-methyltransferase BioC | insig. | 34 | 57 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0606 | | transcriptional regulator, ArsR family/methyltransferase, UbiE/COQ5 family (TIGR) | strong | 38 | 45 |
| | Marinobacter adhaerens HP15 | HP15_2483 | | protein containing methyltransferase type 11 domain | insig. | 37 | 44 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_17035 | | malonyl-ACP O-methyltransferase BioC | sig. | 42 | 45 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS01615 | bioC;go_function=carboxyl-O-methyltransferase | malonyl-ACP O-methyltransferase BioC | sig. | 42 | 45 |
| | Escherichia coli ECOR38 | HEPCGN_01650 | bioC | malonyl-ACP O-methyltransferase BioC | insig. | 37 | 54 |
| | Escherichia coli ECOR27 | NOLOHH_22760 | bioC | malonyl-ACP O-methyltransferase BioC | insig. | 36 | 55 |
| | Escherichia coli ECRC62 | BNILDI_21030 | bioC | malonyl-ACP O-methyltransferase BioC | cofit | 37 | 54 |
| | Escherichia coli ECRC100 | OKFHMN_06390 | bioC | malonyl-ACP O-methyltransferase BioC | insig. | 36 | 55 |
| | Escherichia coli ECRC101 | MCAODC_25605 | bioC | malonyl-ACP O-methyltransferase BioC | insig. | 36 | 55 |
| | Escherichia coli ECRC102 | NIAGMN_04435 | bioC | malonyl-ACP O-methyltransferase BioC | strong | 36 | 55 |
| | Escherichia coli ECRC98 | JDDGAC_10025 | bioC | malonyl-ACP O-methyltransferase BioC | insig. | 36 | 55 |
| | Escherichia coli ECRC99 | KEDOAH_21520 | bioC | malonyl-ACP O-methyltransferase BioC | no data | 36 | 55 |
| | Klebsiella michiganensis M5al | BWI76_RS05430 | | UbiE/COQ5 family methyltransferase | sig. | 32 | 66 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00644 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | cofit | 30 | 59 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS16515 | | methyltransferase domain-containing protein | insig. | 37 | 63 |
| | Escherichia coli BL21 | ECD_00744 | | malonyl-ACP O-methyltransferase, SAM-dependent | insig. | 37 | 54 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02936 | | Malonyl-[acyl-carrier protein] O-methyltransferase | insig. | 37 | 54 |
| | Escherichia coli BW25113 | b0777 | bioC | predicted methltransferase, enzyme of biotin synthesis (NCBI) | sig. | 37 | 54 |
| | Pseudomonas sp. SVBP6 | COO64_RS13150 | | class I SAM-dependent methyltransferase | insig. | 36 | 46 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_13680 | | SAM-dependent methyltransferase | insig. | 33 | 66 |
| | Enterobacter sp. TBS_079 | MPMX20_00895 | | putative methyltransferase YcgJ | insig. | 36 | 47 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_19575 | bioC | malonyl-ACP O-methyltransferase BioC | no data | 36 | 58 |
| | Erwinia tracheiphila SCR3 | LU632_RS09140 | bioC | malonyl-ACP O-methyltransferase BioC | no data | 36 | 58 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_00450 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 34 | 42 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS03195 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | strong | 33 | 49 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS04600 | | class I SAM-dependent methyltransferase | insig. | 33 | 66 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_00395 | | SAM-dependent methyltransferase | insig. | 29 | 85 |
| | Cellulophaga baltica 18 | M666_RS08585 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 23 | 69 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS02100 | | class I SAM-dependent methyltransferase | insig. | 36 | 44 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS02100 | | class I SAM-dependent methyltransferase | insig. | 36 | 44 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3946 | | SAM-dependent methyltransferase YafE (UbiE paralog) | sig. | 36 | 67 |
| | Pseudomonas sp. DMC3 | GFF787 | | putative methyltransferase YcgJ | cofit | 34 | 83 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_12755 | | SAM-dependent methyltransferase | insig. | 31 | 44 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c29610 | | phosphatidylethanolamine N-methyltransferase PmtA | strong | 27 | 83 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS20570 | | class I SAM-dependent methyltransferase | insig. | 37 | 50 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS20570 | | class I SAM-dependent methyltransferase | strong | 37 | 50 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3105 | | Methyltransferase domain | strong | 36 | 50 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS24960 | | class I SAM-dependent methyltransferase | insig. | 35 | 51 |
| | Pseudomonas putida KT2440 | PP_1987 | | Methlytransferase, UbiE/COQ5 family | insig. | 35 | 68 |
| | Cellulophaga baltica 18 | M666_RS13145 | | class I SAM-dependent methyltransferase | insig. | 21 | 65 |
| | Pseudomonas sp. BP01 | JOY50_RS16620 | | class I SAM-dependent methyltransferase | insig. | 35 | 68 |
| | Pseudomonas simiae WCS417 | PS417_02055 | | methyltransferase | insig. | 34 | 44 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_10225 | | methyltransferase | sig. | 38 | 48 |
| | Variovorax sp. OAS795 | ABID97_RS16745 | | class I SAM-dependent methyltransferase | cofit | 38 | 49 |
| | Azospirillum sp. SherDot2 | MPMX19_03671 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 38 | 46 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21410 | | SAM-dependent methyltransferase | cofit | 36 | 50 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_13 | | SAM-dependent methyltransferase YafE (UbiE paralog) | sig. | 36 | 67 |
| | Escherichia fergusonii Becca | EFB2_03833 | | putative methyltransferase YcgJ | insig. | 32 | 63 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2342 | | SAM-dependent methyltransferases | strong | 39 | 47 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS05220 | | S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB | insig. | 36 | 47 |
| | Escherichia coli ECRC62 | BNILDI_09335 | ubiE | SAM-dependent methyltransferase | insig. | 32 | 63 |
| | Klebsiella michiganensis M5al | BWI76_RS08770 | | malonyl-ACP O-methyltransferase BioC | sig. | 40 | 44 |
| | Xanthobacter sp. DMC5 | GFF4148 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 41 | 47 |
| | Sphingobium sp. HT1-2 | GFF218 | | Transcriptional regulator, ArsR family / Methyltransferase fusion | cofit | 39 | 49 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4246 | | SAM-dependent methyltransferases | insig. | 37 | 47 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2684 | | Methyltransferase domain | insig. | 35 | 47 |
| | Rhodopseudomonas palustris CGA009 | TX73_006705 | | class I SAM-dependent methyltransferase | no data | 29 | 71 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00196 | | Ubiquinone/menaquinone biosynthesis C-methylase UbiE | insig. | 36 | 47 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0664 | | Methylase involved in ubiquinone/menaquinone biosynthesis | insig. | 29 | 60 |
| | Variovorax sp. SCN45 | GFF304 | | Ubiquinone/menaquinone biosynthesis methyltransferase family protein | insig. | 35 | 46 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_11855 | | methyltransferase | insig. | 38 | 47 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_65 | | SAM-dependent methyltransferase YafE (UbiE paralog) | sig. | 37 | 50 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_20630 | | SAM-dependent methyltransferase | cofit | 36 | 67 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS25585 | | class I SAM-dependent methyltransferase | strong | 36 | 59 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS58035 | | class I SAM-dependent methyltransferase | insig. | 36 | 59 |
| | Rahnella sp. WP5 | EX31_RS23705 | | malonyl-ACP O-methyltransferase BioC | insig. | 38 | 45 |
| | Pseudomonas sp. RS175 | PFR28_02822 | | putative methyltransferase YcgJ | insig. | 35 | 50 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03946 | | putative methyltransferase YcgJ | cofit | 36 | 50 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_26120 | | SAM-dependent methyltransferase | insig. | 36 | 59 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS01330 | | class I SAM-dependent methyltransferase | sig. | 34 | 56 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS34225 | | class I SAM-dependent methyltransferase | sig. | 34 | 56 |
| | Bosea sp. OAE506 | ABIE41_RS10850 | | class I SAM-dependent methyltransferase | no data | 28 | 76 |
| | Dickeya dianthicola ME23 | DZA65_RS08690 | | methyltransferase domain-containing protein | insig. | 36 | 48 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_15870 | | SAM-dependent methyltransferase | sig. | 34 | 56 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS10075 | | methyltransferase domain-containing protein | insig. | 37 | 48 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS03430 | | SAM-dependent methyltransferase | insig. | 37 | 50 |
| | Paraburkholderia graminis OAS925 | ABIE53_001313 | | SAM-dependent methyltransferase | sig. | 36 | 53 |
| | Pseudomonas sp. BP01 | JOY50_RS07515 | | class I SAM-dependent methyltransferase | no data | 39 | 47 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1969 | | SAM-dependent methyltransferases | insig. | 37 | 48 |
| | Pseudomonas orientalis W4I3 | QF045_RS20730 | | class I SAM-dependent methyltransferase | cofit | 36 | 50 |
| | Agrobacterium fabrum C58 | Atu2124 | | transcriptional regulator, ArsR family | sig. | 39 | 50 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS02235 | | methyltransferase domain-containing protein | cofit | 37 | 53 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS22520 | bioC;go_function=malonyl-CoA | malonyl-ACP O-methyltransferase BioC | no data | 34 | 50 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS36810 | bioC;go_function=malonyl-CoA | malonyl-ACP O-methyltransferase BioC | cofit | 34 | 50 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1408 | mapA | membrane-associated protein | insig. | 33 | 44 |
| | Sinorhizobium meliloti 1021 | SMc01426 | | hypothetical protein | insig. | 31 | 57 |
| | Serratia liquefaciens MT49 | IAI46_19810 | | class I SAM-dependent methyltransferase | insig. | 27 | 66 |
| | Azospirillum brasilense Sp245 | AZOBR_RS09535 | | ArsR family transcriptional regulator | strong | 40 | 58 |
| | Pseudomonas sp. RS175 | PFR28_04550 | | Ubiquinone biosynthesis O-methyltransferase, mitochondrial | insig. | 36 | 47 |
| | Xanthobacter sp. DMC5 | GFF1793 | | Aklanonic acid methyltransferase DauC | no data | 29 | 75 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_22920 | | malonyl-ACP O-methyltransferase BioC | strong | 32 | 50 |
| | Azospirillum sp. SherDot2 | MPMX19_01135 | | putative methyltransferase YcgJ | insig. | 36 | 46 |
| | Pseudomonas simiae WCS417 | PS417_18590 | | SAM-dependent methyltransferase | sig. | 36 | 50 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS07290 | | SAM-dependent methyltransferase | insig. | 34 | 48 |
| | Caulobacter crescentus NA1000 | CCNA_03595 | | S-adenosylmethionine-dependent methyltransferase | insig. | 33 | 50 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03595 | | S-adenosylmethionine-dependent methyltransferase | insig. | 33 | 50 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS09750 | | SAM-dependent methyltransferase | sig. | 26 | 70 |
| | Pseudomonas sp. SVBP6 | COO64_RS05655 | | class I SAM-dependent methyltransferase | insig. | 36 | 50 |
| | Dickeya dianthicola 67-19 | HGI48_RS08095 | | class I SAM-dependent methyltransferase | insig. | 35 | 48 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2214 | | malonyl-acyl carrier protein O-methyltransferase BioC | insig. | 34 | 57 |
| | Lysobacter sp. OAE881 | ABIE51_RS13490 | | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | no data | 32 | 81 |
| | Escherichia coli ECRC100 | OKFHMN_09990 | ubiE | SAM-dependent methyltransferase | insig. | 31 | 52 |
| | Escherichia coli ECRC101 | MCAODC_00505 | ubiE | SAM-dependent methyltransferase | insig. | 31 | 52 |
| | Escherichia coli ECRC102 | NIAGMN_07840 | ubiE | SAM-dependent methyltransferase | insig. | 31 | 52 |
| | Escherichia coli ECRC98 | JDDGAC_13585 | ubiE | SAM-dependent methyltransferase | insig. | 31 | 52 |
| | Escherichia coli ECRC99 | KEDOAH_18165 | ubiE | SAM-dependent methyltransferase | no data | 31 | 52 |
| | Mycobacterium tuberculosis H37Rv | Rv0089 | | Possible methyltransferase/methylase | insig. | 35 | 43 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS03125 | | class I SAM-dependent methyltransferase | insig. | 35 | 65 |
| | Mycobacterium tuberculosis H37Rv | Rv3038c | | Conserved protein | no data | 35 | 43 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_05655 | | malonyl-[acyl-carrier protein] O-methyltransferase BioC | insig. | 34 | 49 |
| | Rhizobium sp. OAE497 | ABIE40_RS30980 | | TIGR04290 family methyltransferase | insig. | 37 | 38 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS01150 | | class I SAM-dependent methyltransferase | insig. | 33 | 52 |
| | Escherichia coli ECOR27 | NOLOHH_02335 | ubiE | SAM-dependent methyltransferase | insig. | 28 | 72 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03451 | | putative methyltransferase YcgJ | insig. | 28 | 72 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS05320 | | class I SAM-dependent methyltransferase | insig. | 38 | 45 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0853 | | putative methyltransferase (NCBI ptt file) | sig. | 26 | 61 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS08170 | | S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB | insig. | 39 | 44 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS25575 | | class I SAM-dependent methyltransferase | sig. | 38 | 47 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_26130 | | SAM-dependent methyltransferase | insig. | 38 | 48 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4042 | | SAM-dependent methyltransferase YafE (UbiE paralog) | insig. | 32 | 53 |
| | Shewanella oneidensis MR-1 | SO1988 | | hypothetical methyltransferase (NCBI ptt file) | insig. | 30 | 46 |
| | Rhizobium sp. OAE497 | ABIE40_RS01190 | | class I SAM-dependent methyltransferase | cofit | 29 | 56 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1822 | | ubiquinone/menaquinone biosynthesis methyltransferases | strong | 27 | 44 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS17180 | | class I SAM-dependent methyltransferase | sig. | 36 | 44 |
| | Mycobacterium tuberculosis H37Rv | Rv1405c | | Putative methyltransferase | insig. | 36 | 44 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF673 | | Biotin synthesis protein BioC | insig. | 34 | 54 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS15820 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 32 | 41 |
| | Rhodopseudomonas palustris CGA009 | TX73_018460 | | arsenite methyltransferase | insig. | 32 | 48 |
| | Klebsiella michiganensis M5al | BWI76_RS19930 | | bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | no data | 32 | 52 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS06060 | | class I SAM-dependent methyltransferase | insig. | 31 | 43 |
| | Pectobacterium carotovorum WPP14 | HER17_RS04660 | | SAM-dependent methyltransferase | insig. | 33 | 56 |
| | Lysobacter sp. OAE881 | ABIE51_RS14385 | | methyltransferase domain-containing protein | no data | 32 | 73 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS13495 | | SAM-dependent methyltransferase | insig. | 31 | 46 |
| | Escherichia coli ECOR38 | HEPCGN_07930 | ubiE | SAM-dependent methyltransferase | insig. | 28 | 72 |
| | Rhodopseudomonas palustris CGA009 | TX73_008295 | | class I SAM-dependent methyltransferase | insig. | 34 | 51 |
| | Azospirillum sp. SherDot2 | MPMX19_00634 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | cofit | 39 | 52 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS15820 | | malonyl-ACP O-methyltransferase BioC | no data | 37 | 45 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_04180 | | class I SAM-dependent methyltransferase | insig. | 37 | 44 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2269 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) @ 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163) | insig. | 36 | 44 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS11170 | | class I SAM-dependent methyltransferase | insig. | 36 | 47 |
| | Caulobacter crescentus NA1000 | CCNA_02225 | | ArsR family/SAM-dependent transcriptional regulator | strong | 36 | 47 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_02225 | | ArsR family/SAM-dependent transcriptional regulator | cofit | 36 | 47 |
| | Mycobacterium tuberculosis H37Rv | Rv1523 | | Probable methyltransferase | insig. | 36 | 47 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05895 | | Methylase involved in ubiquinone/menaquinone biosynthesis | no data | 36 | 47 |
| | Dickeya dadantii 3937 | DDA3937_RS07275 | | class I SAM-dependent methyltransferase | insig. | 33 | 48 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS01985 | | class I SAM-dependent methyltransferase | cofit | 33 | 61 |
| | Pseudomonas sp. S08-1 | OH686_09385 | | SAM-dependent methyltransferase (UbiE paralog) | insig. | 32 | 44 |
| | Enterobacter sp. TBS_079 | MPMX20_03180 | | Ubiquinone biosynthesis O-methyltransferase | no data | 32 | 52 |
| | Pseudomonas sp. BP01 | JOY50_RS17945 | bioC | malonyl-ACP O-methyltransferase BioC | cofit | 32 | 68 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0355 | | 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) | no data | 31 | 52 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS15120 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | no data | 25 | 64 |
| | Sinorhizobium meliloti 1021 | SM_b20238 | | hypothetical protein | insig. | 39 | 28 |
| | Azospirillum sp. SherDot2 | MPMX19_04783 | | Ubiquinone biosynthesis O-methyltransferase, mitochondrial | insig. | 37 | 45 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4023 | | PUTATIVE METHYLTRANSFERASE | insig. | 36 | 47 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_4498 | | ubiquinone/menaquinone biosynthesis methyltransferases | no data | 33 | 45 |
| | Enterobacter sp. TBS_079 | MPMX20_04447 | | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE | no data | 33 | 45 |
| | Rhodopseudomonas palustris CGA009 | TX73_020565 | | class I SAM-dependent methyltransferase | insig. | 31 | 61 |
| | Methylophilus sp. DMC18 | GFF1685 | | Malonyl-[acyl-carrier protein] O-methyltransferase | cofit | 30 | 53 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS58025 | | class I SAM-dependent methyltransferase | sig. | 37 | 47 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS01600 | | class I SAM-dependent methyltransferase | cofit | 37 | 47 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS10790 | | class I SAM-dependent methyltransferase | insig. | 34 | 56 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_26880 | | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | no data | 33 | 52 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS06270 | ubiG;go_function=3-demethylubiquinol-n | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | no data | 33 | 52 |
| | Azospirillum brasilense Sp245 | AZOBR_RS09315 | | hypothetical protein | no data | 39 | 43 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5904 | | FIG00955320: hypothetical protein | insig. | 29 | 60 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS32430 | | SAM-dependent methyltransferase | insig. | 38 | 44 |
| | Dickeya dadantii 3937 | DDA3937_RS05880 | | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | no data | 35 | 46 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1556 | | conserved domain protein (TIGR) | insig. | 35 | 46 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3400 | | ubiquinone biosynthesis O-methyltransferase (RefSeq) | insig. | 34 | 47 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08625 | | class I SAM-dependent methyltransferase | insig. | 31 | 44 |
| | Azospirillum sp. SherDot2 | MPMX19_04629 | | D-inositol-3-phosphate glycosyltransferase | insig. | 30 | 58 |
| | Dickeya dianthicola 67-19 | HGI48_RS07030 | | methyltransferase domain-containing protein | cofit | 29 | 44 |
| | Dickeya dianthicola ME23 | DZA65_RS07510 | | class I SAM-dependent methyltransferase | insig. | 29 | 44 |
| | Caulobacter crescentus NA1000 | CCNA_01922 | | SAM-dependent methyltransferase | strong | 29 | 69 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_01922 | | SAM-dependent methyltransferase | cofit | 29 | 69 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS15150 | | class I SAM-dependent methyltransferase | insig. | 32 | 50 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4763 | | Biotin synthesis protein BioC | strong | 29 | 69 |
| | Pseudomonas sp. SVBP6 | COO64_RS23350 | | class I SAM-dependent methyltransferase | insig. | 35 | 47 |
| | Dickeya dadantii 3937 | DDA3937_RS10700 | | class I SAM-dependent methyltransferase | insig. | 33 | 49 |
| | Serratia liquefaciens MT49 | IAI46_00185 | | class I SAM-dependent methyltransferase | insig. | 33 | 44 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_0867 | | biotin biosynthesis protein BioC | no data | 30 | 53 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0639 | | Methyltransferase type 11 (RefSeq) | insig. | 36 | 45 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS04435 | | 3-demethylubiquinone-9 3-methyltransferase | no data | 35 | 48 |
| | Mycobacterium tuberculosis H37Rv | Rv0839 | | Conserved hypothetical protein | insig. | 32 | 61 |
| | Shewanella amazonensis SB2B | Sama_0150 | | putative SAM-dependent methyltransferase (RefSeq) | insig. | 31 | 56 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05645 | | glycosyltransferase | strong | 31 | 54 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS20330 | | class I SAM-dependent methyltransferase | no data | 31 | 72 |
| | Marinobacter adhaerens HP15 | HP15_2860 | | methyltransferase | cofit | 27 | 50 |
| | Azospirillum sp. SherDot2 | MPMX19_05980 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | insig. | 27 | 67 |
| | Dechlorosoma suillum PS | Dsui_0861 | | ubiquinone/menaquinone biosynthesis methyltransferase | no data | 32 | 51 |
| | Shewanella sp. ANA-3 | Shewana3_2463 | | methyltransferase type 11 (RefSeq) | insig. | 31 | 44 |
| | Pseudomonas sp. SVBP6 | COO64_RS22710 | bioC | malonyl-ACP O-methyltransferase BioC | strong | 30 | 69 |
| | Azospirillum brasilense Sp245 | AZOBR_RS25575 | | phosphatidylethanolamine N-methyltransferase | sig. | 30 | 51 |
| | Pectobacterium carotovorum WPP14 | HER17_RS08815 | | class I SAM-dependent methyltransferase | insig. | 30 | 44 |
| | Pseudomonas stutzeri RCH2 | Psest_0414 | | biotin biosynthesis protein BioC | strong | 32 | 50 |
| | Acinetobacter baumannii LAC-4 | RR41_RS12620 | | class I SAM-dependent methyltransferase | insig. | 32 | 45 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4794 | | Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) | no data | 30 | 53 |
| | Dinoroseobacter shibae DFL-12 | Dshi_2712 | | Phosphatidylethanolamine N-methyltransferase (RefSeq) | insig. | 28 | 67 |
| | Rahnella sp. WP5 | EX31_RS21940 | | class I SAM-dependent methyltransferase | insig. | 33 | 47 |
| | Azospirillum sp. SherDot2 | MPMX19_01375 | | 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial | no data | 36 | 44 |
| | Variovorax sp. OAS795 | ABID97_RS28555 | | methyltransferase domain-containing protein | insig. | 34 | 42 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_12105 | | methyltransferase, TIGR04290 family | insig. | 33 | 40 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS02130 | | class I SAM-dependent methyltransferase | insig. | 31 | 49 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS12500 | | class I SAM-dependent methyltransferase | insig. | 33 | 44 |
| | Pantoea sp. MT58 | IAI47_18285 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 33 | 45 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS15265 | | bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE | no data | 33 | 45 |
| | Shewanella oneidensis MR-1 | SO3266 | | conserved domain protein (NCBI ptt file) | insig. | 33 | 45 |
| | Pseudomonas putida KT2440 | PP_0365 | | Malonyl-[acyl-carrier protein] O-methyltransferase | strong | 32 | 69 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1837 | | 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) | no data | 31 | 49 |
| | Pseudomonas sp. DMC3 | GFF73 | | Malonyl-[acyl-carrier protein] O-methyltransferase | insig. | 28 | 69 |