Homologs of PS417_20275 from Pseudomonas simiae WCS417

RNA helicase
SEED: ATP-dependent RNA helicase SrmB

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_20275 RNA helicase no data 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS22195 DEAD/DEAH box helicase strong 99 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS22195 DEAD/DEAH box helicase strong 99 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04249 ATP-dependent RNA helicase RhlE insig. 99 100
o Pseudomonas orientalis W4I3 QF045_RS22365 DEAD/DEAH box helicase insig. 99 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4451 ATP-dependent RNA helicase SrmB strong 94 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_543 ATP-dependent RNA helicase SrmB no data 95 100
o Pseudomonas sp. DMC3 GFF2355 ATP-dependent RNA helicase RhlE no data 93 100
o Pseudomonas fluorescens FW300-N2C3 AO356_04210 RNA helicase no data 94 100
o Pseudomonas fluorescens FW300-N2E3 AO353_18305 RNA helicase sig. 94 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2675 ATP-dependent RNA helicase SrmB insig. 94 100
o Pseudomonas sp. RS175 PFR28_00756 ATP-dependent RNA helicase RhlE insig. 93 100
o Pseudomonas syringae pv. syringae B728a Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal sig. 85 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 85 100
o Pseudomonas sp. SVBP6 COO64_RS21930 DEAD/DEAH box helicase insig. 81 100
o Pseudomonas segetis P6 ACVTMO_RS16090 DEAD/DEAH box helicase no data 77 99
o Pseudomonas putida KT2440 PP_4532 ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis strong 77 99
o Pseudomonas sp. BP01 JOY50_RS01230 DEAD/DEAH box helicase insig. 77 99
o Pseudomonas stutzeri RCH2 Psest_1627 Superfamily II DNA and RNA helicases strong 76 99
o Pseudomonas sp. S08-1 OH686_05415 ATP-dependent RNA helicase SrmB cofit 75 99
o Pseudomonas aeruginosa PA14 IKLFDK_17790 RNA helicase insig. 72 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS41480 DEAD/DEAH box helicase no data 71 99
o Pseudomonas aeruginosa MRSN321 DY961_RS15590 DEAD/DEAH box helicase strong 71 99
o Kangiella aquimarina DSM 16071 B158DRAFT_1312 Superfamily II DNA and RNA helicases insig. 45 97
o Shewanella oneidensis MR-1 SO2838 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 41 99
  Herbaspirillum seropedicae SmR1 HSERO_RS17855 DEAD/DEAH box helicase sig. 38 98
o Shewanella sp. ANA-3 Shewana3_2606 DEAD/DEAH box helicase domain-containing protein (RefSeq) no data 42 85
o Shewanella amazonensis SB2B Sama_1273 DEAD/DEAH box helicase-like protein (RefSeq) no data 41 85
  Vibrio cholerae E7946 ATCC 55056 CSW01_18020 DEAD/DEAH box helicase cofit 44 83
  Methylophilus sp. DMC18 GFF1281 ATP-dependent RNA helicase RhlE cofit 39 99
o Pantoea sp. MT58 IAI47_04835 ATP-dependent RNA helicase SrmB strong 41 94
o Shewanella loihica PV-4 Shew_2452 DEAD/DEAH box helicase domain-containing protein (RefSeq) no data 41 87
  Ralstonia solanacearum PSI07 RPSI07_RS13580 ATP-dependent helicase sig. 41 84
  Ralstonia sp. UNC404CL21Col ABZR87_RS15540 DEAD/DEAH box helicase sig. 41 84
  Pantoea sp. MT58 IAI47_13435 ATP-dependent RNA helicase RhlE insig. 41 83
  Ralstonia solanacearum GMI1000 RS_RS02695 RNA helicase sig. 41 82
  Cupriavidus basilensis FW507-4G11 RR42_RS14720 RNA helicase no data 38 94
  Ralstonia sp. UNC404CL21Col ABZR87_RS07850 DEAD/DEAH box helicase sig. 41 83
  Ralstonia solanacearum PSI07 RPSI07_RS21325 RNA helicase sig. 41 82
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS03875 ATP-dependent RNA helicase RhlE cofit 41 83
  Pseudomonas sp. SVBP6 COO64_RS15390 DEAD/DEAH box helicase insig. 42 82
  Herbaspirillum seropedicae SmR1 HSERO_RS17155 RNA helicase insig. 37 94
  Klebsiella pneumoniae MKP103 KDGMDA_17180 ATP-dependent RNA helicase RhlE sig. 42 83
  Pseudomonas orientalis W4I3 QF045_RS26765 DEAD/DEAH box helicase insig. 42 87
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11875 RNA helicase strong 40 83
  Ralstonia solanacearum UW163 UW163_RS01715 RNA helicase insig. 40 83
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03650 ATP-dependent helicase insig. 40 84
  Ralstonia solanacearum UW163 UW163_RS10020 ATP-dependent helicase insig. 40 84
  Pseudomonas sp. BP01 JOY50_RS21825 DEAD/DEAH box helicase insig. 42 82
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5046 ATP-dependent RNA helicase PA3950 strong 41 87
  Pseudomonas sp. RS175 PFR28_03825 ATP-dependent RNA helicase RhlE insig. 40 87
  Ralstonia solanacearum GMI1000 RS_RS11095 ATP-dependent helicase sig. 40 84
  Dechlorosoma suillum PS Dsui_3406 DNA/RNA helicase, superfamily II insig. 37 100
  Paraburkholderia sabiae LMG 24235 QEN71_RS24485 DEAD/DEAH box helicase insig. 42 82
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05046 ATP-dependent RNA helicase RhlE cofit 42 87
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS14725 ATP-dependent RNA helicase SrmB strong 40 93
  Shewanella sp. ANA-3 Shewana3_3336 ATP-dependent RNA helicase SrmB (RefSeq) strong 42 83
  Pseudomonas putida KT2440 PP_4766 ATP-dependent RNA helicase strong 42 82
  Pseudomonas fluorescens FW300-N2C3 AO356_15530 DEAD/DEAH box helicase sig. 40 87
  Pseudomonas aeruginosa PA14 IKLFDK_20375 DEAD/DEAH box helicase sig. 42 82
  Pseudomonas aeruginosa PUPa3 DQ20_RS48430 DEAD/DEAH box helicase sig. 42 82
  Pseudomonas segetis P6 ACVTMO_RS05445 DEAD/DEAH box helicase sig. 42 82
  Pseudomonas fluorescens FW300-N2E3 AO353_06265 DEAD/DEAH box helicase strong 41 87
  Vibrio cholerae E7946 ATCC 55056 CSW01_14335 ATP-dependent helicase insig. 40 88
o Erwinia amylovora T8 OLJFJH_10200 ATP-dependent RNA helicase SrmB strong 39 98
  Pseudomonas aeruginosa MRSN321 DY961_RS13105 DEAD/DEAH box helicase insig. 41 85
  Cupriavidus basilensis FW507-4G11 RR42_RS02870 RNA helicase sig. 41 82
  Shewanella amazonensis SB2B Sama_2742 ATP-dependent RNA helicase SrmB (RefSeq) cofit 42 84
  Vibrio cholerae E7946 ATCC 55056 CSW01_03475 ATP-dependent RNA helicase SrmB cofit 43 83
  Shewanella loihica PV-4 Shew_0767 ATP-dependent RNA helicase SrmB (RefSeq) strong 42 83
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1409 ATP-dependent RNA helicase PA3950 insig. 41 87
  Pseudomonas fluorescens SBW25 PFLU_RS26425 DEAD/DEAH box helicase insig. 41 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26425 DEAD/DEAH box helicase sig. 41 87
  Azospirillum sp. SherDot2 MPMX19_02011 RNA helicase CrhR strong 42 90
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14000 ATP-dependent helicase insig. 40 81
  Ralstonia solanacearum UW163 UW163_RS15810 ATP-dependent helicase insig. 40 81
  Paraburkholderia graminis OAS925 ABIE53_001438 ATP-dependent RNA helicase RhlE strong 42 82
  Cupriavidus basilensis FW507-4G11 RR42_RS14810 DEAD/DEAH box helicase insig. 37 95
  Shewanella oneidensis MR-1 SO0947 srmB ATP-dependent RNA helicase SrmB (NCBI ptt file) strong 42 83
  Dickeya dadantii 3937 DDA3937_RS08645 ATP-dependent RNA helicase RhlE sig. 42 83
  Pseudomonas simiae WCS417 PS417_24500 DEAD/DEAH box helicase strong 41 87
  Klebsiella michiganensis M5al BWI76_RS08915 ATP-dependent RNA helicase RhlE sig. 41 82
  Methylophilus sp. DMC18 GFF250 ATP-dependent RNA helicase RhlE insig. 40 83
  Methylophilus sp. DMC18 GFF1280 ATP-dependent RNA helicase RhlE insig. 40 87
  Dickeya dianthicola 67-19 HGI48_RS08785 ATP-dependent RNA helicase RhlE cofit 37 100
  Dickeya dianthicola ME23 DZA65_RS09075 ATP-dependent RNA helicase RhlE insig. 37 100
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00308 Superfamily II DNA and RNA helicase strong 42 82
o Alteromonas macleodii MIT1002 MIT1002_00941 ATP-dependent RNA helicase SrmB no data 42 83
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2736 ATP-dependent RNA helicase PA3950 sig. 41 87
  Ralstonia solanacearum GMI1000 RS_RS04735 RNA helicase insig. 40 81
  Castellaniella sp019104865 MT123 ABCV34_RS12515 DEAD/DEAH box helicase cofit 42 82
  Shewanella sp. ANA-3 Shewana3_0810 DEAD/DEAH box helicase domain-containing protein (RefSeq) insig. 38 97
  Burkholderia phytofirmans PsJN BPHYT_RS06155 DEAD/DEAH box helicase strong 39 92
o Serratia liquefaciens MT49 IAI46_19600 ATP-dependent RNA helicase SrmB strong 39 99
  Rahnella sp. WP5 EX31_RS23775 ATP-dependent RNA helicase RhlE insig. 42 82
  Enterobacter sp. TBS_079 MPMX20_01425 ATP-dependent RNA helicase RhlE insig. 40 82
  Pseudomonas sp. DMC3 GFF3924 ATP-dependent RNA helicase RhlE cofit 40 87
  Castellaniella sp019104865 MT123 ABCV34_RS07925 DEAD/DEAH box helicase cofit 42 82
  Variovorax sp. OAS795 ABID97_RS21170 DEAD/DEAH box helicase sig. 41 81
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF222 ATP-dependent RNA helicase Bcep18194_A5658 insig. 41 82