Homologs of GFF215 from Variovorax sp. SCN45

RNA polymerase sigma-54 factor RpoN
SEED: RNA polymerase sigma-54 factor RpoN
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

250 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF215 RNA polymerase sigma-54 factor RpoN insig. 100 100
o Variovorax sp. OAS795 ABID97_RS16445 sigma-70 family RNA polymerase sigma factor no data 84 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4350 RNA polymerase sigma-54 factor RpoN insig. 61 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06547 RNA polymerase sigma-70 factor, ECF subfamily insig. 52 93
o Paraburkholderia sabiae LMG 24235 QEN71_RS00095 RNA polymerase sigma factor insig. 53 89
o Burkholderia phytofirmans PsJN BPHYT_RS24740 RNA polymerase subunit sigma-24 sig. 54 93
o Paraburkholderia graminis OAS925 ABIE53_006215 RNA polymerase sigma-70 factor (ECF subfamily) insig. 52 93
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF329 RNA polymerase sigma-54 factor RpoN insig. 55 93
  Azospirillum brasilense Sp245 AZOBR_RS10625 RNA polymerase sigma-70 factor insig. 50 89
o Azospirillum sp. SherDot2 MPMX19_00764 ECF RNA polymerase sigma factor EcfG insig. 51 82
  Azospirillum brasilense Sp245 AZOBR_RS06360 RNA polymerase subunit sigma-24 no data 48 95
o Cupriavidus basilensis FW507-4G11 RR42_RS19070 DNA-directed RNA polymerase sigma-70 factor insig. 51 92
o Herbaspirillum seropedicae SmR1 HSERO_RS13530 RNA polymerase subunit sigma-24 no data 56 87
  Azospirillum sp. SherDot2 MPMX19_01371 hypothetical protein insig. 49 92
o Dechlorosoma suillum PS Dsui_1302 RNA polymerase sigma factor, sigma-70 family cofit 52 94
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05124 RNA polymerase sigma-70 factor, ECF subfamily insig. 47 91
  Paraburkholderia graminis OAS925 ABIE53_002425 RNA polymerase sigma-70 factor (ECF subfamily) insig. 45 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS23005 sigma-70 family RNA polymerase sigma factor insig. 44 97
  Burkholderia phytofirmans PsJN BPHYT_RS08240 RNA polymerase subunit sigma-24 sig. 46 88
o Pseudomonas fluorescens SBW25 PFLU_RS19010 sigma-70 family RNA polymerase sigma factor insig. 45 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19010 sigma-70 family RNA polymerase sigma factor sig. 45 97
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03722 ECF RNA polymerase sigma factor EcfG no data 46 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2582 RNA polymerase sigma-54 factor RpoN insig. 45 97
  Azospirillum sp. SherDot2 MPMX19_00923 hypothetical protein insig. 44 100
o Ralstonia solanacearum PSI07 RPSI07_RS10230 RNA polymerase sigma factor no data 47 91
o Ralstonia solanacearum GMI1000 RS_RS14950 RNA polymerase sigma factor no data 47 91
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS07010 RNA polymerase sigma factor no data 46 94
o Ralstonia solanacearum UW163 UW163_RS06605 RNA polymerase sigma factor no data 46 94
o Pseudomonas sp. DMC3 GFF1465 ECF RNA polymerase sigma factor EcfG insig. 45 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3977 RNA polymerase sigma-54 factor RpoN insig. 46 97
o Pseudomonas simiae WCS417 PS417_17070 RNA polymerase subunit sigma-24 insig. 46 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2200 RNA polymerase sigma-54 factor RpoN sig. 45 97
o Pseudomonas fluorescens FW300-N2C3 AO356_01625 RNA polymerase subunit sigma-24 insig. 46 97
o Sphingobium sp. HT1-2 GFF2028 hypothetical protein cofit 43 96
o Magnetospirillum magneticum AMB-1 AMB_RS13315 hypothetical protein insig. 46 91
o Pseudomonas orientalis W4I3 QF045_RS18740 sigma-70 family RNA polymerase sigma factor insig. 44 97
o Rhizobium sp. OAE497 ABIE40_RS22730 RNA polymerase sigma factor insig. 40 95
o Pseudomonas sp. RS175 PFR28_01251 ECF RNA polymerase sigma factor EcfG insig. 45 95
  Cupriavidus basilensis FW507-4G11 RR42_RS32410 RNA polymerase subunit sigma-24 no data 48 86
  Rhizobium sp. OAE497 ABIE40_RS20320 sigma-70 family RNA polymerase sigma factor insig. 41 90
o Ralstonia sp. UNC404CL21Col ABZR87_RS02660 RNA polymerase sigma factor insig. 46 87
o Pseudomonas fluorescens FW300-N2E3 AO353_20305 RNA polymerase subunit sigma-24 no data 44 97
o Agrobacterium fabrum C58 Atu1485 ECF family sigma factor insig. 44 84
  Sphingobium sp. HT1-2 GFF4975 RNA polymerase ECF-type sigma factor cofit 40 87
o Bosea sp. OAE506 ABIE41_RS04095 sigma-70 family RNA polymerase sigma factor strong 39 88
  Azospirillum brasilense Sp245 AZOBR_RS11020 RNA polymerase subunit sigma-70 no data 44 100
  Sinorhizobium meliloti 1021 SMa0143 RNA polymerase ECF sigma factor insig. 42 94
  Sphingobium sp. HT1-2 GFF5151 RNA polymerase ECF-type sigma factor cofit 39 88
  Agrobacterium fabrum C58 Atu4160 RNA polymerase sigma factor strong 38 89
o Dinoroseobacter shibae DFL-12 Dshi_3835 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 37 89
o Pseudomonas sp. SVBP6 COO64_RS10855 sigma-70 family RNA polymerase sigma factor insig. 43 100
  Sinorhizobium meliloti 1021 SMc01506 RNA polymerase sigma factor strong 37 94
o Pseudomonas sp. BP01 JOY50_RS05860 sigma-70 family RNA polymerase sigma factor no data 44 96
o Pseudomonas putida KT2440 PP_2888 putative ECF sigma factor PrtI no data 46 96
  Sphingobium sp. HT1-2 GFF2317 RNA polymerase ECF-type sigma factor cofit 36 94
o Pseudomonas protegens RBAN4 FABNJH_20415 RNA polymerase sigma factor insig. 42 95
  Rhizobium sp. OAE497 ABIE40_RS14450 RNA polymerase sigma factor insig. 38 94
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3492 RNA polymerase sigma factor, sigma-70 family strong 37 91
  Rhizobium sp. OAE497 ABIE40_RS11455 RNA polymerase sigma factor insig. 41 87
o Caulobacter crescentus NA1000 CCNA_02977 RNA polymerase ECF-type sigma factor sigU strong 37 93
o Caulobacter crescentus NA1000 Δfur CCNA_02977 RNA polymerase ECF-type sigma factor sigU cofit 37 93
o Phaeobacter inhibens DSM 17395 PGA1_c27070 RNA polymerase sigma factor 70 (ECF15 subgroup, ECF26 subgroup) insig. 38 88
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3853 RNA polymerase sigma factor, sigma-70 family insig. 40 94
  Xanthobacter sp. DMC5 GFF2321 ECF RNA polymerase sigma factor EcfG no data 38 88
o Rhodopseudomonas palustris CGA009 TX73_021900 sigma-70 family RNA polymerase sigma factor strong 37 88
o Alteromonas macleodii MIT1002 MIT1002_03872 RNA polymerase sigma factor SigM insig. 39 89
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02635 RNA polymerase sigma factor insig. 40 86
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3411 RNA polymerase sigma factor, sigma-70 family insig. 42 89
  Sinorhizobium meliloti 1021 SMc01419 RNA polymerase sigma factor protein sig. 39 94
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14775 sigma-70 family RNA polymerase sigma factor strong 37 90
  Azospirillum brasilense Sp245 AZOBR_RS23735 RNA polymerase no data 41 84
  Sinorhizobium meliloti 1021 SMc02713 RNA polymerase sigma-E factor (sigma-24) protein strong 36 92
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24230 RNA polymerase sigma factor strong 33 93
  Sinorhizobium meliloti 1021 SM_b21484 RNA polymerase sigma-E factor (sigma-24) protein insig. 38 90
  Sphingobium sp. HT1-2 GFF4551 hypothetical protein cofit 37 85
  Caulobacter crescentus NA1000 CCNA_03589 RNA polymerase EcfG family sigma factor sigT strong 36 90
  Caulobacter crescentus NA1000 Δfur CCNA_03589 RNA polymerase EcfG family sigma factor sigT cofit 36 90
  Rhodospirillum rubrum S1H Rru_A3287 Sigma-24 (FecI) (NCBI) no data 34 90
  Sphingobium sp. HT1-2 GFF5325 RNA polymerase ECF-type sigma factor cofit 36 89
  Azospirillum sp. SherDot2 MPMX19_01197 ECF RNA polymerase sigma factor EcfG insig. 36 88
  Serratia liquefaciens MT49 IAI46_22980 RNA polymerase sigma factor insig. 37 80
  Burkholderia phytofirmans PsJN BPHYT_RS08845 RNA polymerase sigma factor insig. 36 89
  Agrobacterium fabrum C58 Atu2030 ECF family sigma factor insig. 39 81
  Sphingobium sp. HT1-2 GFF1466 RNA polymerase sigma-54 factor RpoN insig. 34 89
  Azospirillum brasilense Sp245 AZOBR_RS14755 RNA polymerase sigma-70 factor insig. 36 88
  Rhizobium sp. OAE497 ABIE40_RS27415 sigma-70 family RNA polymerase sigma factor insig. 35 88
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19215 RNA polymerase subunit sigma sig. 32 91
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0287 RNA polymerase sigma factor, sigma-70 family strong 33 85
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS16550 RNA polymerase sigma factor strong 32 93
  Bacteroides ovatus ATCC 8483 BACOVA_04312 Sigma-70 region 2 insig. 33 88
  Phaeobacter inhibens DSM 17395 PGA1_78p00070 'RNA polymerase sigma-70, ECF subfamily; ECF26 subgroup' no data 34 82
  Enterobacter asburiae PDN3 EX28DRAFT_2729 RNA polymerase sigma factor, sigma-70 family insig. 34 89
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01799 RNA polymerase sigma-70 factor, ECF subfamily insig. 36 89
  Bacteroides ovatus ATCC 8483 BACOVA_03979 Sigma-70 region 2 strong 32 85
  Phocaeicola dorei CL03T12C01 ABI39_RS07815 RNA polymerase sigma factor strong 31 87
  Dickeya dadantii 3937 DDA3937_RS11055 sigma-70 family RNA polymerase sigma factor insig. 34 96
  Dickeya dianthicola 67-19 HGI48_RS11075 sigma-70 family RNA polymerase sigma factor insig. 34 96
  Rhizobium sp. OAE497 ABIE40_RS21790 sigma-70 family RNA polymerase sigma factor cofit 36 90
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12805 RNA polymerase sigma factor strong 30 87
  Paraburkholderia graminis OAS925 ABIE53_003919 RNA polymerase sigma-70 factor (ECF subfamily) insig. 34 85
  Rhizobium sp. OAE497 ABIE40_RS15675 sigma-70 family RNA polymerase sigma factor insig. 33 89
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS11995 RNA polymerase subunit sigma insig. 29 90
  Bacteroides thetaiotaomicron VPI-5482 BT1197 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 32 85
  Paraburkholderia graminis OAS925 ABIE53_002003 RNA polymerase sigma factor (sigma-70 family) sig. 34 93
  Phocaeicola dorei CL03T12C01 ABI39_RS17450 RNA polymerase sigma factor strong 31 83
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03770 RNA polymerase sigma factor strong 31 83
  Pectobacterium carotovorum WPP14 HER17_RS09715 sigma-70 family RNA polymerase sigma factor cofit 33 89
  Pantoea sp. MT58 IAI47_21640 sigma-70 family RNA polymerase sigma factor insig. 34 81
  Rhizobium sp. OAE497 ABIE40_RS13310 RNA polymerase sigma factor insig. 32 90
  Bacteroides thetaiotaomicron VPI-5482 BT1572 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 32 84
  Bacteroides stercoris CC31F HMPREF1181_RS08110 sigma-70 family RNA polymerase sigma factor insig. 31 87
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1476 RNA polymerase sigma factor, sigma-70 family insig. 30 86
  Rhizobium sp. OAE497 ABIE40_RS03400 RNA polymerase sigma factor insig. 34 80
  Cupriavidus basilensis FW507-4G11 RR42_RS16520 RNA polymerase sigma factor insig. 36 89
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05041 RNA polymerase sigma-70 factor, ECF subfamily insig. 34 82
  Paraburkholderia sabiae LMG 24235 QEN71_RS32245 RNA polymerase sigma factor insig. 32 90
  Ralstonia solanacearum GMI1000 RS_RS25030 RNA polymerase sigma factor insig. 37 93
  Mycobacterium tuberculosis H37Rv Rv3223c Alternative RNA polymerase sigma-E factor (sigma-24) SigH (RPOE) insig. 29 91
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23375 RNA polymerase sigma factor insig. 35 96
  Ralstonia solanacearum UW163 UW163_RS16625 RNA polymerase sigma factor insig. 35 96
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1191 RNA polymerase sigma factor, sigma-70 family insig. 34 79
  Bacteroides thetaiotaomicron VPI-5482 BT2569 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 30 84
  Bacteroides ovatus ATCC 8483 BACOVA_00669 Sigma-70 region 2 insig. 29 87
  Enterobacter sp. TBS_079 MPMX20_03520 ECF RNA polymerase sigma factor EcfG insig. 35 81
  Bacteroides thetaiotaomicron VPI-5482 BT3457 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 30 84
  Paraburkholderia sabiae LMG 24235 QEN71_RS22515 RNA polymerase sigma factor insig. 35 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05043 RNA polymerase sigma-70 factor, ECF subfamily no data 32 94
  Mycobacterium tuberculosis H37Rv Rv1221 Alternative RNA polymerase sigma factor SigE insig. 32 89
  Paraburkholderia graminis OAS925 ABIE53_003943 RNA polymerase sigma-70 factor (ECF subfamily) sig. 34 85
  Bacteroides ovatus ATCC 8483 BACOVA_01848 Sigma-70 region 2 strong 30 84
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10915 RNA polymerase subunit sigma strong 29 88
  Ralstonia sp. UNC404CL21Col ABZR87_RS23395 RNA polymerase sigma factor insig. 37 95
  Kangiella aquimarina DSM 16071 B158DRAFT_0015 RNA polymerase sigma factor, sigma-70 family insig. 35 82
  Bacteroides stercoris CC31F HMPREF1181_RS16950 RNA polymerase sigma factor strong 30 84
  Bacteroides stercoris CC31F HMPREF1181_RS02840 RNA polymerase sigma factor sig. 31 85
  Bacteroides thetaiotaomicron VPI-5482 BT2383 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 29 87
  Xanthobacter sp. DMC5 GFF1190 ECF RNA polymerase sigma factor SigR insig. 34 91
  Rhodospirillum rubrum S1H Rru_A3285 Response regulator receiver domain protein (CheY) (NCBI) insig. 34 78
  Bifidobacterium breve UCC2003 BBR_RS16820 RNA polymerase sigma factor RpoE strong 31 88
  Bacteroides ovatus ATCC 8483 BACOVA_02205 Sigma-70 region 2 sig. 30 84
  Azospirillum brasilense Sp245 AZOBR_RS06745 regulator insig. 35 86
  Paraburkholderia sabiae LMG 24235 QEN71_RS36705 RNA polymerase sigma factor insig. 30 93
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09010 sigma-70 family RNA polymerase sigma factor insig. 37 82
  Ralstonia solanacearum PSI07 RPSI07_RS07750 RNA polymerase sigma factor insig. 35 90
  Bacteroides thetaiotaomicron VPI-5482 BT2044 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 30 87
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF325 RNA polymerase sigma-70 factor, ECF subfamily no data 35 91
  Mycobacterium tuberculosis H37Rv Rv0735 Probable alternative RNA polymerase sigma factor SigL insig. 38 88
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS22400 sigma-70 family RNA polymerase sigma factor cofit 35 73
  Pseudomonas stutzeri RCH2 Psest_3456 RNA polymerase sigma factor, sigma-70 family insig. 35 85
  Vibrio cholerae E7946 ATCC 55056 CSW01_05315 RNA polymerase subunit sigma insig. 33 87
  Phocaeicola dorei CL03T12C01 ABI39_RS09920 sigma-70 family RNA polymerase sigma factor insig. 28 85
  Synechococcus elongatus PCC 7942 Synpcc7942_1923 sigG RNA polymerase sigma factor RpoE strong 30 76
  Rahnella sp. WP5 EX31_RS05375 sigma-70 family RNA polymerase sigma factor insig. 35 86
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01554 RNA polymerase sigma-70 factor, ECF subfamily insig. 37 67
  Agrobacterium fabrum C58 Atu5490 ECF family RNA polymerase sigma factor insig. 28 89
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS16675 hypothetical protein insig. 30 82
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14290 sigma-70 family RNA polymerase sigma factor insig. 27 85
  Azospirillum sp. SherDot2 MPMX19_05043 hypothetical protein insig. 34 78
  Castellaniella sp019104865 MT123 ABCV34_RS11175 sigma-70 family RNA polymerase sigma factor insig. 33 82
  Marinobacter adhaerens HP15 HP15_342 RNA polymerase sigma factor SigE insig. 32 94
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14445 sigma-70 family RNA polymerase sigma factor insig. 31 78
  Variovorax sp. SCN45 GFF4558 RNA polymerase ECF-type sigma factor insig. 38 89
  Pseudomonas fluorescens FW300-N2E3 AO353_21275 RNA polymerase subunit sigma insig. 32 87
  Phocaeicola dorei CL03T12C01 ABI39_RS10065 sigma-70 family RNA polymerase sigma factor insig. 31 78
  Rhodanobacter sp. FW510-T8 OKGIIK_06725 rpoE RNA polymerase subunit sigma-70 insig. 38 77
  Sinorhizobium meliloti 1021 SMc04051 RNA polymerase sigma-E factor (sigma-24) protein insig. 31 85
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15765 RNA polymerase sigma factor strong 29 85
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05410 RNA polymerase sigma factor strong 28 84
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS09585 RNA polymerase sigma factor no data 37 77
  Rhodanobacter denitrificans MT42 LRK55_RS00300 RNA polymerase sigma factor cofit 37 77
  Shewanella oneidensis MR-1 SO3096 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) strong 34 85
  Sphingobium sp. HT1-2 GFF4485 RNA polymerase sigma factor cnrH cofit 32 90
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02825 sigma-70 family RNA polymerase sigma factor insig. 32 89
  Rhodanobacter sp. FW510-T8 OKGIIK_13920 RNA polymerase subunit sigma insig. 33 91
  Shewanella sp. ANA-3 Shewana3_1453 RNA polymerase sigma factor (RefSeq) sig. 33 85
  Rhodospirillum rubrum S1H Rru_A2537 Sigma-24 (FecI) (NCBI) insig. 29 80
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12270 RNA polymerase subunit sigma insig. 28 87
  Dickeya dianthicola 67-19 HGI48_RS11715 RNA polymerase sigma factor insig. 30 88
  Dickeya dianthicola ME23 DZA65_RS12200 RNA polymerase sigma factor insig. 30 88
  Azospirillum sp. SherDot2 MPMX19_01090 Phyllosphere-induced regulator PhyR insig. 31 88
  Phocaeicola dorei CL03T12C01 ABI39_RS03560 RNA polymerase sigma factor insig. 28 86
  Rhodanobacter denitrificans MT42 LRK55_RS07240 sigma-70 family RNA polymerase sigma factor insig. 32 89
  Shewanella loihica PV-4 Shew_2433 RNA polymerase sigma factor (RefSeq) no data 31 90
  Rhodopseudomonas palustris CGA009 TX73_003315 RNA polymerase sigma factor insig. 28 96
  Rhodanobacter denitrificans MT42 LRK55_RS02580 sigma-70 family RNA polymerase sigma factor insig. 37 78
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00565 RNA polymerase sigma factor insig. 35 72
  Azospirillum brasilense Sp245 AZOBR_RS21690 regulator insig. 34 92
  Shewanella amazonensis SB2B Sama_2036 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 30 90
  Dickeya dadantii 3937 DDA3937_RS11655 sigma-70 family RNA polymerase sigma factor insig. 29 88
  Vibrio cholerae E7946 ATCC 55056 CSW01_11715 RNA polymerase subunit sigma insig. 31 92
  Shewanella loihica PV-4 Shew_1476 RNA polymerase sigma factor (RefSeq) insig. 30 89
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07500 sigma-70 family RNA polymerase sigma factor insig. 32 89
  Azospirillum sp. SherDot2 MPMX19_04424 Phyllosphere-induced regulator PhyR insig. 34 90
  Pseudomonas simiae WCS417 PS417_03450 RNA polymerase sigma factor insig. 31 94
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07040 RNA polymerase sigma factor insig. 28 88
  Shewanella oneidensis MR-1 SO3551 RNA polymerase sigma-70 factor, ECF subfamily (NCBI ptt file) insig. 26 92
  Alteromonas macleodii MIT1002 MIT1002_02682 Sigma-W factor strong 33 91
  Variovorax sp. SCN45 GFF5806 RNA polymerase ECF-type sigma factor insig. 31 85
  Cupriavidus basilensis FW507-4G11 RR42_RS35625 RNA polymerase sigma24 factor insig. 32 91
  Magnetospirillum magneticum AMB-1 AMB_RS09285 RNA polymerase sigma factor no data 32 85
  Azospirillum brasilense Sp245 AZOBR_RS00810 RNA polymerase sigma factor RpoE insig. 31 90
  Pseudomonas fluorescens SBW25 PFLU_RS00840 RNA polymerase sigma factor insig. 30 89
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00840 RNA polymerase sigma factor sig. 30 89
  Herbaspirillum seropedicae SmR1 HSERO_RS03905 RNA polymerase subunit sigma-24 insig. 29 96
  Shewanella sp. ANA-3 Shewana3_3152 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) cofit 27 92
  Lysobacter sp. OAE881 ABIE51_RS16295 sigma-70 family RNA polymerase sigma factor insig. 31 83
  Pseudomonas simiae WCS417 PS417_00810 RNA polymerase sigma factor insig. 30 89
  Pseudomonas fluorescens SBW25 PFLU_RS03525 RNA polymerase sigma factor insig. 29 88
  Pseudomonas fluorescens SBW25-INTG PFLU_RS03525 RNA polymerase sigma factor insig. 29 88
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_19605 RNA polymerase insig. 27 80
  Kangiella aquimarina DSM 16071 B158DRAFT_2027 RNA polymerase sigma factor, sigma-70 family insig. 26 81
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3656 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 29 82
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00795 sigma-70 family RNA polymerase sigma factor strong 22 91
  Pseudomonas protegens RBAN4 FABNJH_00920 RNA polymerase sigma factor insig. 31 89
  Ralstonia sp. UNC404CL21Col ABZR87_RS03700 RNA polymerase sigma factor insig. 31 89
  Pseudomonas syringae pv. syringae B728a Psyr_1217 Sigma-70 region 2:Sigma-70 region 4 strong 28 90
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1217 Sigma-70 region 2:Sigma-70 region 4 cofit 28 90
  Variovorax sp. OAS795 ABID97_RS21865 sigma-70 family RNA polymerase sigma factor insig. 28 91
  Rhodospirillum rubrum S1H Rru_A0722 Sigma-24 (FecI) (NCBI) insig. 30 84
  Bacteroides thetaiotaomicron VPI-5482 BT4720 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) cofit 30 75
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS01700 RNA polymerase sigma factor insig. 26 74
  Cupriavidus basilensis FW507-4G11 RR42_RS04015 RNA polymerase sigma factor insig. 36 82
  Acidovorax sp. GW101-3H11 Ac3H11_916 RNA polymerase sigma-70 factor insig. 31 75
  Phaeobacter inhibens DSM 17395 PGA1_c08510 RNA polymerase sigma factor (ECF01 subgroup, ECF20 subgroup) insig. 31 82
  Pseudomonas sp. RS175 PFR28_04750 RNA polymerase sigma-H factor insig. 31 89
  Phocaeicola dorei CL03T12C01 ABI39_RS04680 RNA polymerase sigma factor insig. 28 84
  Cupriavidus basilensis FW507-4G11 RR42_RS14080 RNA polymerase sigma factor RpoE strong 28 85
  Sphingobium sp. HT1-2 GFF4091 hypothetical protein insig. 28 82
  Rhodanobacter sp. FW510-T8 OKGIIK_12575 rpoE RNA polymerase subunit sigma-24 insig. 27 90
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15190 RNA polymerase sigma factor insig. 23 89
  Mycobacterium tuberculosis H37Rv Rv2069 RNA polymerase sigma factor, ECF subfamily, SigC insig. 33 77
  Pseudomonas fluorescens FW300-N2C3 AO356_10740 RNA polymerase subunit sigma insig. 31 89
  Pseudomonas segetis P6 ACVTMO_RS10610 RNA polymerase sigma factor insig. 30 92
  Bacteroides ovatus ATCC 8483 BACOVA_01909 Sigma-70 region 2 sig. 28 84
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07720 sigma-70 family RNA polymerase sigma factor strong 30 77
  Dinoroseobacter shibae DFL-12 Dshi_1784 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 35 82
  Alteromonas macleodii MIT1002 MIT1002_01278 RNA polymerase sigma factor SigV insig. 31 88
  Phocaeicola dorei CL03T12C01 ABI39_RS00235 sigma-70 family RNA polymerase sigma factor sig. 30 77
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00902 ECF RNA polymerase sigma factor SigC insig. 30 84
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09455 RNA polymerase sigma factor insig. 31 85
  Rhodopseudomonas palustris CGA009 TX73_002850 sigma-70 family RNA polymerase sigma factor insig. 26 94
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16945 RNA polymerase sigma factor sig. 23 76
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3635.1 RNA polymerase ECF-type sigma factor insig. 34 82
  Bacteroides thetaiotaomicron VPI-5482 BT3396 RNA polymerase ECF-type sigma factor (NCBI ptt file) strong 28 84
  Shewanella sp. ANA-3 Shewana3_0763 ECF subfamily RNA polymerase sigma-24 factor (RefSeq) insig. 25 89
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12120 RNA polymerase sigma factor strong 28 84
  Azospirillum brasilense Sp245 AZOBR_RS28490 hypothetical protein sig. 27 95
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00391 RNA polymerase sigma-H factor cofit 30 89
  Pseudomonas orientalis W4I3 QF045_RS06435 RNA polymerase sigma factor insig. 30 90
  Dinoroseobacter shibae DFL-12 Dshi_2428 RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) insig. 27 83