Homologs of Echvi_4397 from Echinicola vietnamensis KMM 6221, DSM 17526

Nucleoside-diphosphate-sugar epimerases
SEED: NAD-dependent epimerase/dehydratase family protein
KEGG: GDP-L-fucose synthase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4397 Nucleoside-diphosphate-sugar epimerases strong 100 100
o Escherichia fergusonii Becca EFB2_01802 GDP-L-fucose synthase insig. 39 97
o Escherichia coli ECRC101 OKFHMN_24350 fcl GDP-L-fucose synthase insig. 39 97
o Escherichia coli ECRC101 MCAODC_20590 fcl GDP-L-fucose synthase insig. 39 97
o Escherichia coli ECRC102 NIAGMN_22295 fcl GDP-L-fucose synthase insig. 39 97
o Escherichia coli ECRC98 JDDGAC_28460 fcl GDP-L-fucose synthase no data 39 97
o Escherichia coli ECRC99 KEDOAH_03800 fcl GDP-L-fucose synthase no data 39 97
o Escherichia coli ECOR27 NOLOHH_15680 fcl GDP-L-fucose synthase cofit 39 97
o Escherichia coli BL21 ECD_01958 bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase insig. 39 97
o Escherichia coli ECRC62 BNILDI_14590 fcl GDP-L-fucose synthase insig. 39 97
o Escherichia coli BW25113 b2052 fcl bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase (NCBI) sig. 39 97
o Mycobacterium tuberculosis H37Rv Rv1512 Probable nucleotide-sugar epimerase EpiA insig. 38 97
o Variovorax sp. OAS795 ABID97_RS19130 GDP-L-fucose synthase insig. 40 96
o Escherichia coli Nissle 1917 ECOLIN_RS12090 GDP-L-fucose synthase no data 39 97
o Pseudomonas stutzeri RCH2 Psest_1819 Nucleoside-diphosphate-sugar epimerases strong 38 96
  Escherichia coli ECRC101 OKFHMN_24445 wcaG GDP-fucose synthetase insig. 40 97
  Escherichia coli ECRC101 MCAODC_20495 wcaG GDP-fucose synthetase no data 40 97
  Escherichia coli ECRC102 NIAGMN_22390 wcaG GDP-fucose synthetase no data 40 97
  Escherichia coli ECRC98 JDDGAC_28555 wcaG GDP-fucose synthetase no data 40 97
  Escherichia coli ECRC99 KEDOAH_03705 wcaG GDP-fucose synthetase no data 40 97
o Castellaniella sp019104865 MT123 ABCV34_RS12930 GDP-L-fucose synthase no data 40 97
o Escherichia coli ECOR38 HEPCGN_03050 fcl GDP-L-fucose synthase cofit 39 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04777 GDP-L-fucose synthase insig. 39 97
o Enterobacter asburiae PDN3 EX28DRAFT_0503 Nucleoside-diphosphate-sugar epimerases insig. 39 97
o Azospirillum sp. SherDot2 MPMX19_06659 GDP-L-fucose synthase insig. 38 96
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3876 GDP-L-fucose synthetase (EC 1.1.1.271) insig. 39 97
o Enterobacter sp. TBS_079 MPMX20_03034 GDP-L-fucose synthase sig. 39 97
o Phaeobacter inhibens DSM 17395 PGA1_65p00300 GDP-L-fucose synthetase Fcl no data 40 96
o Paraburkholderia sabiae LMG 24235 QEN71_RS26355 GDP-L-fucose synthase insig. 39 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05195 GDP-fucose synthetase strong 43 96
o Synechococcus elongatus PCC 7942 Synpcc7942_1700 wcaG GDP-fucose synthetase NAD dependent epimerase/dehydratase no data 41 96
o Paraburkholderia graminis OAS925 ABIE53_000941 GDP-L-fucose synthase sig. 39 97
o Pseudomonas fluorescens SBW25 PFLU_RS17885 GDP-L-fucose synthase insig. 38 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS17885 GDP-L-fucose synthase sig. 38 96
o Dechlorosoma suillum PS Dsui_0086 nucleoside-diphosphate-sugar epimerase strong 38 97
o Cupriavidus basilensis FW507-4G11 RR42_RS34460 GDP-L-fucose synthase sig. 38 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1841 GDP-L-fucose synthetase (EC 1.1.1.271) strong 38 97
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2555 GDP-L-fucose synthetase (EC 1.1.1.271) insig. 38 96
o Burkholderia phytofirmans PsJN BPHYT_RS04005 GDP-L-fucose synthase strong 38 97
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS03850 GDP-L-fucose synthase insig. 40 97
o Magnetospirillum magneticum AMB-1 AMB_RS00820 GDP-L-fucose synthase cofit 38 97
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19675 GDP-fucose synthetase insig. 41 99
  Cupriavidus basilensis FW507-4G11 RR42_RS33240 GDP-L-fucose synthase strong 39 95
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19205 GDP-fucose synthetase insig. 41 99
  Azospirillum sp. SherDot2 MPMX19_06634 GDP-L-fucose synthase cofit 38 97
o Agrobacterium fabrum C58 Atu4790 GDP-fucose synthetase insig. 38 96
o Desulfovibrio vulgaris Hildenborough JW710 DVU0090 wcaG GDP-fucose synthetase (TIGR) no data 39 99
  Azospirillum sp. SherDot2 MPMX19_05629 GDP-L-fucose synthase insig. 38 97
o Pectobacterium carotovorum WPP14 HER17_RS14535 GDP-L-fucose synthase cofit 38 97
o Desulfovibrio vulgaris Miyazaki F DvMF_2695 NAD-dependent epimerase/dehydratase (RefSeq) strong 37 99
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17480 GDP-L-fucose synthase no data 40 96
  Magnetospirillum magneticum AMB-1 AMB_RS04085 GDP-L-fucose synthase cofit 37 97
o Azospirillum brasilense Sp245 AZOBR_RS03370 GDP-L-fucose synthase insig. 39 97
o Caulobacter crescentus NA1000 CCNA_00471 GDP-L-fucose synthase strong 40 96
o Caulobacter crescentus NA1000 Δfur CCNA_00471 GDP-L-fucose synthase cofit 40 96
o Rhodospirillum rubrum S1H Rru_A0254 NAD-dependent epimerase/dehydratase (NCBI) insig. 37 97
o Variovorax sp. SCN45 GFF60 GDP-L-fucose synthetase (EC 1.1.1.271) insig. 37 93
o Dinoroseobacter shibae DFL-12 Dshi_4142 NAD-dependent epimerase/dehydratase (RefSeq) strong 36 97
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF53 GDP-L-fucose synthetase (EC 1.1.1.271) insig. 35 95
  Cupriavidus basilensis FW507-4G11 RR42_RS21005 GDP-L-fucose synthase insig. 36 95
o Rhodanobacter denitrificans MT42 LRK55_RS03655 GDP-L-fucose synthase strong 38 94
o Herbaspirillum seropedicae SmR1 HSERO_RS22065 EpiA sig. 34 97
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06610 GDP-L-fucose synthase strong 32 96
o Phocaeicola dorei CL03T12C01 ABI39_RS20405 GDP-L-fucose synthase strong 33 96
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00180 GDP-L-fucose synthase strong 33 97
o Bacteroides stercoris CC31F HMPREF1181_RS12535 GDP-L-fucose synthase strong 32 96
  Phocaeicola dorei CL03T12C01 ABI39_RS13275 GDP-L-fucose synthase insig. 33 97
o Bacteroides thetaiotaomicron VPI-5482 BT1225 GDP-fucose synthetase (NCBI ptt file) no data 31 98
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17275 GDP-L-fucose synthase sig. 32 97
o Bacteroides ovatus ATCC 8483 BACOVA_00512 NAD dependent epimerase/dehydratase family protein no data 31 98
o Dickeya dianthicola 67-19 HGI48_RS18610 GDP-L-fucose synthase cofit 28 97
o Dickeya dianthicola ME23 DZA65_RS19745 GDP-L-fucose synthase strong 28 97
o Dickeya dadantii 3937 DDA3937_RS18680 GDP-L-fucose synthase strong 28 97
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13020 NAD-dependent epimerase/dehydratase family protein strong 29 97
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2369 GDP-L-fucose synthetase (EC 1.1.1.271) insig. 26 89
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2372 GDP-L-fucose synthetase (EC 1.1.1.271) insig. 23 97
o Rhizobium sp. OAE497 ABIE40_RS02610 NAD-dependent epimerase/dehydratase family protein insig. 24 97
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13405 NAD-dependent dehydratase strong 26 96
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS25425 NAD-dependent dehydratase no data 27 96
  Desulfovibrio vulgaris Miyazaki F DvMF_2922 NAD-dependent epimerase/dehydratase (RefSeq) no data 24 97
  Pseudomonas sp. RS175 PFR28_03960 UDP-glucose 4-epimerase no data 25 94
  Pseudomonas stutzeri RCH2 Psest_3572 Nucleoside-diphosphate-sugar epimerases no data 26 94
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20900 UDP-glucuronic acid decarboxylase family protein no data 27 96
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17915 LPS biosynthesis protein WbpP strong 23 98
  Rhodopseudomonas palustris CGA009 TX73_020675 UDP-glucose 4-epimerase GalE insig. 22 91
  Acidovorax sp. GW101-3H11 Ac3H11_1900 UDP-glucose 4-epimerase (EC 5.1.3.2) no data 25 79
  Agrobacterium fabrum C58 Atu0530 UDP-galactose 4-epimerase sig. 22 91
  Pseudomonas fluorescens FW300-N2C3 AO356_14875 NAD-dependent dehydratase no data 25 94
  Pseudomonas sp. S08-1 OH686_11985 GDP-mannose 4,6-dehydratase cofit 25 96
  Marinobacter adhaerens HP15 HP15_p187g66 UDP-glucose 4-epimerase insig. 23 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4908 UDP-glucose 4-epimerase (EC 5.1.3.2) strong 26 77
  Pseudomonas sp. S08-1 OH686_15630 UDP-glucose 4-epimerase no data 21 94
  Rhodanobacter denitrificans MT42 LRK55_RS09735 SDR family oxidoreductase insig. 23 98
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10095 SDR family oxidoreductase insig. 23 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS25630 NAD-dependent epimerase/dehydratase family protein strong 25 97
  Mycobacterium tuberculosis H37Rv Rv3784 Possible dTDP-glucose 4,6-dehydratase insig. 23 96
  Methanococcus maripaludis JJ MMJJ_RS08715 NAD-dependent epimerase/dehydratase family protein strong 26 94
  Variovorax sp. OAS795 ABID97_RS24220 NAD-dependent epimerase/dehydratase family protein insig. 29 35
  Bacteroides thetaiotaomicron VPI-5482 BT2880 putative nucleotide-sugar dehydratase (NCBI ptt file) insig. 23 94
  Sinorhizobium meliloti 1021 SM_b20459 UDP-glucose 4-epimerase insig. 23 81