Homologs of CSW01_14335 from Vibrio cholerae E7946 ATCC 55056

ATP-dependent helicase
SEED: ATP-dependent RNA helicase VCA0061

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_14335 ATP-dependent helicase insig. 100 100
o Shewanella oneidensis MR-1 SO2838 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 59 99
o Shewanella sp. ANA-3 Shewana3_2606 DEAD/DEAH box helicase domain-containing protein (RefSeq) no data 58 99
o Shewanella amazonensis SB2B Sama_1273 DEAD/DEAH box helicase-like protein (RefSeq) no data 57 99
o Shewanella loihica PV-4 Shew_2452 DEAD/DEAH box helicase domain-containing protein (RefSeq) no data 57 98
o Alteromonas macleodii MIT1002 MIT1002_01999 ATP-dependent RNA helicase SrmB no data 47 98
  Ralstonia solanacearum GMI1000 RS_RS04735 RNA helicase insig. 43 86
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14000 ATP-dependent helicase insig. 42 86
  Ralstonia solanacearum UW163 UW163_RS15810 ATP-dependent helicase insig. 42 86
  Ralstonia sp. UNC404CL21Col ABZR87_RS09700 DEAD/DEAH box helicase strong 42 86
  Ralstonia solanacearum PSI07 RPSI07_RS19465 ATP-dependent helicase insig. 42 86
  Herbaspirillum seropedicae SmR1 HSERO_RS17155 RNA helicase insig. 41 86
  Cupriavidus basilensis FW507-4G11 RR42_RS14720 RNA helicase no data 43 86
  Ralstonia solanacearum GMI1000 RS_RS02695 RNA helicase sig. 38 92
  Pseudomonas stutzeri RCH2 Psest_1627 Superfamily II DNA and RNA helicases strong 42 85
  Lysobacter sp. OAE881 ABIE51_RS06650 DEAD/DEAH box helicase insig. 41 92
  Pseudomonas sp. RS175 PFR28_00756 ATP-dependent RNA helicase RhlE insig. 41 86
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00581 Superfamily II DNA and RNA helicase no data 43 86
o Pseudomonas sp. SVBP6 COO64_RS21930 DEAD/DEAH box helicase insig. 41 86
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4451 ATP-dependent RNA helicase SrmB strong 39 92
  Pseudomonas sp. BP01 JOY50_RS01230 DEAD/DEAH box helicase insig. 41 87
  Ralstonia sp. UNC404CL21Col ABZR87_RS07850 DEAD/DEAH box helicase sig. 39 84
  Pseudomonas fluorescens FW300-N2E3 AO353_18305 RNA helicase sig. 40 86
  Pseudomonas sp. DMC3 GFF2355 ATP-dependent RNA helicase RhlE no data 40 86
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2675 ATP-dependent RNA helicase SrmB insig. 39 90
  Burkholderia phytofirmans PsJN BPHYT_RS12280 RNA helicase insig. 42 86
  Paraburkholderia graminis OAS925 ABIE53_002535 superfamily II DNA/RNA helicase strong 42 86
  Pseudomonas fluorescens FW300-N2C3 AO356_04210 RNA helicase no data 39 90
  Pseudomonas orientalis W4I3 QF045_RS22365 DEAD/DEAH box helicase insig. 41 86
  Methylophilus sp. DMC18 GFF1281 ATP-dependent RNA helicase RhlE cofit 42 84
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_543 ATP-dependent RNA helicase SrmB no data 40 86
  Pseudomonas sp. S08-1 OH686_05415 ATP-dependent RNA helicase SrmB cofit 40 91
  Pseudomonas syringae pv. syringae B728a Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal sig. 39 97
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 39 97
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11875 RNA helicase strong 39 84
  Ralstonia solanacearum UW163 UW163_RS01715 RNA helicase insig. 39 84
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04249 ATP-dependent RNA helicase RhlE insig. 41 86
  Ralstonia solanacearum PSI07 RPSI07_RS21325 RNA helicase sig. 39 84
  Pseudomonas fluorescens SBW25 PFLU_RS22195 DEAD/DEAH box helicase strong 41 86
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22195 DEAD/DEAH box helicase strong 41 86
  Pseudomonas putida KT2440 PP_4532 ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis strong 41 85
  Pseudomonas simiae WCS417 PS417_20275 RNA helicase no data 39 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS06275 DEAD/DEAH box helicase insig. 42 86
  Pseudomonas sp. SVBP6 COO64_RS17470 DEAD/DEAH box helicase insig. 38 92
  Pseudomonas segetis P6 ACVTMO_RS16090 DEAD/DEAH box helicase no data 41 86
  Cupriavidus basilensis FW507-4G11 RR42_RS02870 RNA helicase sig. 39 84
  Castellaniella sp019104865 MT123 ABCV34_RS13580 DEAD/DEAH box helicase sig. 43 84
  Pseudomonas sp. RS175 PFR28_04204 ATP-dependent RNA helicase RhlE sig. 40 84
  Azospirillum sp. SherDot2 MPMX19_06125 RNA helicase CrhR insig. 40 83
  Azospirillum sp. SherDot2 MPMX19_02011 RNA helicase CrhR strong 38 91
  Dechlorosoma suillum PS Dsui_3174 DNA/RNA helicase, superfamily II insig. 39 87
  Acinetobacter baumannii LAC-4 RR41_RS02020 DEAD/DEAH box helicase insig. 42 83
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1048 ATP-dependent RNA helicase RhlE sig. 39 84
  Herbaspirillum seropedicae SmR1 HSERO_RS08565 RNA helicase insig. 39 84
  Pseudomonas fluorescens FW300-N2C3 AO356_13590 DEAD/DEAH box helicase sig. 40 84
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4635 ATP-dependent RNA helicase RhlE strong 40 84
  Pseudomonas fluorescens FW300-N2E3 AO353_08030 DEAD/DEAH box helicase sig. 39 84
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2382 ATP-dependent RNA helicase RhlE sig. 39 84
  Pseudomonas sp. DMC3 GFF174 ATP-dependent RNA helicase RhlE cofit 39 84
o Pseudomonas aeruginosa PA14 IKLFDK_17790 RNA helicase insig. 40 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 39 84
  Pseudomonas segetis P6 ACVTMO_RS03195 DEAD/DEAH box helicase strong 37 92
  Pseudomonas sp. S08-1 OH686_10835 ATP-dependent RNA helicase RhlE cofit 40 82
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4527.1 ATP-dependent RNA helicase RhlE strong 39 84
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08975 DEAD/DEAH box helicase insig. 42 79
  Paraburkholderia graminis OAS925 ABIE53_003462 ATP-dependent RNA helicase RhlE sig. 39 84
  Pseudomonas fluorescens SBW25 PFLU_RS28180 DEAD/DEAH box helicase cofit 39 84
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28180 DEAD/DEAH box helicase sig. 39 84
  Pseudomonas simiae WCS417 PS417_26525 DEAD/DEAH box helicase strong 39 84
  Pseudomonas orientalis W4I3 QF045_RS00920 DEAD/DEAH box helicase cofit 39 84
  Pseudomonas stutzeri RCH2 Psest_0312 Superfamily II DNA and RNA helicases strong 38 87
  Pseudomonas syringae pv. syringae B728a Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal insig. 39 84
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0458 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal insig. 39 84
  Klebsiella pneumoniae MKP103 KDGMDA_17180 ATP-dependent RNA helicase RhlE sig. 39 84
  Klebsiella pneumoniae MRSN742743 KFA93_RS01465 rhlE;go_function=RNA ATP-dependent RNA helicase RhlE cofit 39 84
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05436 ATP-dependent RNA helicase RhlE cofit 39 84
o Pseudomonas aeruginosa MRSN321 DY961_RS15590 DEAD/DEAH box helicase strong 42 85
o Pseudomonas aeruginosa PUPa3 DQ20_RS41480 DEAD/DEAH box helicase no data 42 85
  Rhodanobacter denitrificans MT42 LRK55_RS02395 DEAD/DEAH box helicase insig. 41 80
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02640 DEAD/DEAH box helicase sig. 41 80
  Shewanella loihica PV-4 Shew_0767 ATP-dependent RNA helicase SrmB (RefSeq) strong 41 85
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04222 ATP-dependent RNA helicase RhlE sig. 39 84
  Burkholderia phytofirmans PsJN BPHYT_RS16445 RNA helicase strong 39 84
  Vibrio cholerae E7946 ATCC 55056 CSW01_18020 DEAD/DEAH box helicase cofit 39 84
  Pseudomonas sp. BP01 JOY50_RS09795 DEAD/DEAH box helicase insig. 39 84
  Caulobacter crescentus NA1000 CCNA_01923 ATP-dependent RNA helicase strong 40 80
  Caulobacter crescentus NA1000 Δfur CCNA_01923 ATP-dependent RNA helicase cofit 40 80
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS07310 DEAD/DEAH box helicase insig. 41 80
  Enterobacter sp. TBS_079 MPMX20_01425 ATP-dependent RNA helicase RhlE insig. 39 82
  Enterobacter asburiae PDN3 EX28DRAFT_2194 Superfamily II DNA and RNA helicases insig. 39 82
  Pseudomonas putida KT2440 PP_4980 ATP-dependent RNA helicase sig. 39 84
  Shewanella amazonensis SB2B Sama_2687 DEAD-box ATP dependent DNA helicase (RefSeq) insig. 36 92
  Kangiella aquimarina DSM 16071 B158DRAFT_1312 Superfamily II DNA and RNA helicases insig. 38 84
  Shewanella amazonensis SB2B Sama_2742 ATP-dependent RNA helicase SrmB (RefSeq) cofit 40 85
  Vibrio cholerae E7946 ATCC 55056 CSW01_03475 ATP-dependent RNA helicase SrmB cofit 39 83
  Bosea sp. OAE506 ABIE41_RS22380 DEAD/DEAH box helicase insig. 40 80
  Castellaniella sp019104865 MT123 ABCV34_RS12515 DEAD/DEAH box helicase cofit 39 84
  Acinetobacter radioresistens SK82 MPMX26_02742 ATP-dependent RNA helicase DeaD cofit 41 83
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF696 ATP-dependent RNA helicase RhlE insig. 38 84
  Marinobacter adhaerens HP15 HP15_3607 DEAD/DEAH box helicase domain protein insig. 37 84