| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_08200 | | MATE family efflux transporter | cofit | 100 | 100 |
| | Fusobacterium nucleatum SB010 | HUW76_00785 | | MATE family efflux transporter | cofit | 32 | 97 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS03905 | | MATE family efflux transporter | insig. | 25 | 96 |
| | Fusobacterium nucleatum SB010 | HUW76_02280 | | MATE family efflux transporter | cofit | 22 | 95 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS00410 | | MATE family efflux transporter | insig. | 22 | 96 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS08030 | | MATE family efflux transporter | insig. | 22 | 96 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2195 | | putative efflux protein, MATE family | insig. | 27 | 87 |
| | Agrobacterium fabrum C58 | Atu2172 | | multidrug efflux protein | insig. | 26 | 90 |
| | Cellulophaga baltica 18 | M666_RS10435 | | MATE family efflux transporter | cofit | 26 | 91 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_0859 | | putative efflux protein, MATE family | strong | 26 | 88 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_21515 | | MATE family efflux transporter | insig. | 28 | 68 |
| | Fusobacterium nucleatum SB010 | HUW76_09930 | | MATE family efflux transporter | cofit | 24 | 95 |
| | Rhizobium sp. OAE497 | ABIE40_RS12780 | | MATE family efflux transporter | insig. | 26 | 88 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS16405 | | MATE family efflux transporter | strong | 24 | 88 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_06370 | | MATE family efflux transporter | sig. | 26 | 88 |
| | Dickeya dadantii 3937 | DDA3937_RS13645 | | MATE family efflux transporter | insig. | 25 | 88 |
| | Sinorhizobium meliloti 1021 | SMc01211 | | hypothetical protein | insig. | 29 | 64 |
| | Rahnella sp. WP5 | EX31_RS13855 | | MATE family efflux transporter | insig. | 27 | 86 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0588 | | BexA: efflux pump for ciprofloxacin, lomefloxacin, and paraquat (from data) | strong | 26 | 96 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2785 | | putative efflux protein, MATE family | strong | 24 | 88 |
| | Dickeya dianthicola 67-19 | HGI48_RS12700 | | MATE family efflux transporter | insig. | 25 | 91 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_03694 | | MATE efflux family protein | insig. | 23 | 96 |
| | Lysobacter sp. OAE881 | ABIE51_RS07765 | | MATE family efflux transporter | insig. | 24 | 91 |
| | Bosea sp. OAE506 | ABIE41_RS08515 | | MATE family efflux transporter | insig. | 25 | 85 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS14765 | | MATE family efflux transporter | strong | 24 | 86 |
| | Fusobacterium nucleatum SB010 | HUW76_07040 | | MATE family efflux transporter | cofit | 24 | 81 |
| | Dickeya dianthicola ME23 | DZA65_RS13155 | | MATE family efflux transporter | insig. | 25 | 91 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c21310 | | multidrug resistance protein NorM | sig. | 24 | 86 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS10860 | | MATE family efflux transporter | insig. | 28 | 64 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS15150 | | MATE family efflux transporter | strong | 26 | 66 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_0975 | | putative efflux protein, MATE family | insig. | 24 | 71 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04342 | | MATE efflux family protein | sig. | 27 | 66 |
| | Acinetobacter radioresistens SK82 | MPMX26_02955 | | Multidrug export protein MepA | insig. | 25 | 87 |
| | Shewanella amazonensis SB2B | Sama_1761 | | MATE efflux family protein (RefSeq) | sig. | 27 | 86 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS15065 | | MATE family efflux transporter | sig. | 28 | 64 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS07880 | | MATE family efflux transporter | insig. | 27 | 75 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_07675 | | MATE family efflux transporter | sig. | 24 | 88 |
| | Pseudomonas segetis P6 | ACVTMO_RS07135 | | MATE family efflux transporter | insig. | 26 | 90 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1217 | | MATE efflux family protein (TIGR) | cofit | 25 | 84 |
| | Enterobacter sp. TBS_079 | MPMX20_01973 | | Multidrug resistance protein MdtK | strong | 23 | 93 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS08960 | | MATE family efflux transporter | strong | 22 | 96 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS03795 | | MATE family efflux transporter | strong | 25 | 67 |
| | Shewanella sp. ANA-3 | Shewana3_3485 | | MATE efflux family protein (RefSeq) | insig. | 23 | 95 |
| | Dinoroseobacter shibae DFL-12 | Dshi_0755 | | MATE efflux family protein (RefSeq) | insig. | 26 | 86 |
| | Pectobacterium carotovorum WPP14 | HER17_RS09220 | | MATE family efflux transporter | cofit | 25 | 89 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_00793 | | MATE efflux family protein | insig. | 24 | 67 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS17770 | | MATE family efflux transporter | insig. | 23 | 89 |
| | Serratia liquefaciens MT49 | IAI46_11210 | | MATE family efflux transporter | cofit | 24 | 89 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS14690 | | MATE family efflux transporter | insig. | 25 | 66 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS17425 | | MATE family efflux transporter | insig. | 25 | 67 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01638 | | Multidrug resistance protein NorM | cofit | 24 | 86 |
| | Shewanella oneidensis MR-1 | SO0802 | | MATE efflux family protein (NCBI ptt file) | insig. | 24 | 95 |
| | Pseudomonas segetis P6 | ACVTMO_RS11575 | | MATE family efflux transporter | insig. | 24 | 87 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_1660 | | putative efflux protein, MATE family | insig. | 23 | 93 |
| | Pseudomonas sp. S08-1 | OH686_13730 | | Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM,-related | insig. | 27 | 82 |
| | Klebsiella michiganensis M5al | BWI76_RS16535 | | MATE family efflux transporter | strong | 24 | 89 |
| | Pseudomonas sp. DMC3 | GFF1263 | | Multidrug resistance protein NorM | cofit | 23 | 87 |
| | Pantoea sp. MT58 | IAI47_10820 | | MATE family efflux transporter | insig. | 23 | 89 |
| | Rhodospirillum rubrum S1H | Rru_A0697 | | Multi antimicrobial extrusion protein MatE (NCBI) | insig. | 28 | 42 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1193 | | conserved hypothetical protein (NCBI ptt file) | strong | 25 | 68 |
| | Pseudomonas sp. S08-1 | OH686_02075 | | Na(+)/drug antiporter, MATE family of MDR efflux pumps | insig. | 23 | 86 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1387 | | putative Na+-driven multidrug efflux pump (NCBI ptt file) | insig. | 24 | 67 |
| | Fusobacterium nucleatum SB010 | HUW76_07965 | | MATE family efflux transporter | insig. | 20 | 67 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS11015 | | MATE family efflux transporter | insig. | 27 | 69 |
| | Ralstonia solanacearum GMI1000 | RS_RS05915 | | MATE family efflux transporter | insig. | 24 | 69 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT3804 | | putative transport protein, multidrug efflux protein (NCBI ptt file) | strong | 25 | 90 |
| | Pseudomonas orientalis W4I3 | QF045_RS13765 | | MATE family efflux transporter | cofit | 24 | 85 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_23335 | | MATE family efflux transporter | insig. | 24 | 85 |
| | Erwinia amylovora T8 | OLJFJH_14535 | | Multidrug resistance protein MdtK | insig. | 23 | 95 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS10730 | | MATE family efflux transporter | insig. | 23 | 70 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01723 | | putative FMN/FAD exporter YeeO | insig. | 23 | 65 |
| | Escherichia coli BL21 | ECD_01896 | | putative multdrug exporter, MATE family | insig. | 22 | 65 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS09785 | | MATE family efflux transporter | insig. | 22 | 90 |
| | Acinetobacter baumannii LAC-4 | RR41_RS00520 | | MATE family efflux transporter | insig. | 28 | 54 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3764.1 | | Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog | insig. | 26 | 72 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_07735 | | multidrug resistance protein NorM | cofit | 23 | 86 |
| | Escherichia coli ECRC62 | BNILDI_14905 | yeeO | toxic metabolite efflux MATE transporter YeeO | insig. | 22 | 65 |
| | Escherichia coli BW25113 | b1985 | yeeO | predicted multidrug efflux system (RefSeq) | sig. | 22 | 65 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS10790 | | MATE family efflux transporter | insig. | 24 | 86 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS11085 | | MATE family efflux transporter | insig. | 24 | 86 |
| | Agrobacterium fabrum C58 | Atu3669 | | siderophore biosynthesis protein | insig. | 23 | 83 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3892 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | insig. | 23 | 93 |
| | Escherichia coli ECOR27 | NOLOHH_16110 | yeeO | toxic metabolite efflux MATE transporter YeeO | insig. | 22 | 65 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_18565 | | EmmdR/YeeO family multidrug/toxin efflux MATE transporter | cofit | 23 | 65 |
| | Escherichia fergusonii Becca | EFB2_01924 | | putative FMN/FAD exporter YeeO | insig. | 22 | 65 |
| | Escherichia coli ECRC100 | OKFHMN_25165 | yeeO | toxic metabolite efflux MATE transporter YeeO | insig. | 22 | 65 |
| | Escherichia coli ECRC101 | MCAODC_20225 | yeeO | toxic metabolite efflux MATE transporter YeeO | insig. | 22 | 65 |
| | Escherichia coli ECRC98 | JDDGAC_29295 | yeeO | toxic metabolite efflux MATE transporter YeeO | insig. | 22 | 65 |
| | Escherichia coli ECRC99 | KEDOAH_02945 | yeeO | toxic metabolite efflux MATE transporter YeeO | no data | 22 | 65 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS13835 | mdtK;inference=COORDINATES | MdtK family multidrug efflux MATE transporter | insig. | 23 | 89 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS11485 | | toxic metabolite efflux MATE transporter YeeO | insig. | 22 | 65 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS09270 | | multidrug efflux MATE transporter MdtK | no data | 23 | 89 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS09015 | | multidrug transporter MatE | insig. | 25 | 66 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_23495 | | MdtK family multidrug efflux MATE transporter | insig. | 23 | 89 |
| | Paraburkholderia graminis OAS925 | ABIE53_002038 | | MATE family multidrug resistance protein | insig. | 26 | 66 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS03980 | | MATE family efflux transporter | insig. | 25 | 86 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4499 | | conserved hypothetical protein, putative membrane protein (NCBI ptt file) | insig. | 24 | 80 |
| | Pseudomonas simiae WCS417 | PS417_11670 | | multidrug transporter MATE | sig. | 23 | 88 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS07610 | | MATE family efflux transporter | insig. | 23 | 86 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS07610 | | MATE family efflux transporter | insig. | 23 | 86 |