Homologs of CSW01_03285 from Vibrio cholerae E7946 ATCC 55056

AI-2E family transporter
SEED: Predicted permease

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_03285 AI-2E family transporter insig. 100 100
o Desulfovibrio vulgaris Miyazaki F DvMF_3082 protein of unknown function UPF0118 (RefSeq) strong 38 91
o Desulfovibrio vulgaris Hildenborough JW710 DVU1189 conserved hypothetical protein (TIGR) sig. 34 91
o Pseudomonas aeruginosa MRSN321 DY961_RS03960 AI-2E family transporter sig. 34 90
o Pseudomonas aeruginosa PUPa3 DQ20_RS34990 AI-2E family transporter insig. 34 90
o Pseudomonas aeruginosa PA14 IKLFDK_13310 AI-2E family transporter sig. 33 90
o Pantoea sp. MT58 IAI47_14150 AI-2E family transporter cofit 32 96
o Klebsiella pneumoniae MKP103 KDGMDA_26805 AI-2E family transporter insig. 34 90
o Pseudomonas stutzeri RCH2 Psest_2012 Predicted permease insig. 30 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS03120 AI-2E family transporter insig. 32 94
o Klebsiella michiganensis M5al BWI76_RS19855 AI-2E family transporter insig. 32 96
o Cupriavidus basilensis FW507-4G11 RR42_RS15425 membrane protein insig. 31 94
o Enterobacter sp. TBS_079 MPMX20_00952 Putative transport protein YdiK insig. 33 90
  Desulfovibrio vulgaris Miyazaki F DvMF_1707 protein of unknown function UPF0118 (RefSeq) insig. 48 53
  Pectobacterium carotovorum WPP14 HER17_RS20960 AI-2E family transporter insig. 33 90
o Enterobacter asburiae PDN3 EX28DRAFT_2609 Predicted permease insig. 32 90
o Rahnella sp. WP5 EX31_RS10525 AI-2E family transporter insig. 31 94
o Marinobacter adhaerens HP15 HP15_593 protein belonging to uncharacterized protein family UPF0118 sig. 31 94
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3926 membrane protein, putative insig. 31 90
o Pseudomonas sp. S08-1 OH686_00090 Uncharacterized UPF0118 membrane protein cofit 29 94
o Variovorax sp. OAS795 ABID97_RS22290 AI-2E family transporter insig. 32 94
o Pseudomonas lactucae CFBP13502 GEMAOFIL_02170 Putative transport protein YdiK insig. 29 91
o Pseudomonas fluorescens FW300-N2C3 AO356_21305 hypothetical protein insig. 27 97
o Pseudomonas sp. BP01 JOY50_RS12685 AI-2E family transporter insig. 32 93
o Rhodopseudomonas palustris CGA009 TX73_002840 AI-2E family transporter insig. 28 94
o Pseudomonas orientalis W4I3 QF045_RS12380 AI-2E family transporter insig. 29 89
o Pseudomonas putida KT2440 PP_2207 conserved membrane protein of unknown function insig. 30 92
o Erwinia amylovora T8 OLJFJH_12970 AI-2E family transporter insig. 29 95
o Sinorhizobium meliloti 1021 SM_b21335 hypothetical protein insig. 30 90
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2486 membrane protein, putative insig. 31 94
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1907 membrane protein, putative insig. 29 90
o Pseudomonas simiae WCS417 PS417_10400 membrane protein insig. 27 91
o Acidovorax sp. GW101-3H11 Ac3H11_2468 membrane protein, putative sig. 31 86
o Pseudomonas sp. SVBP6 COO64_RS24345 AI-2E family transporter insig. 30 91
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_46 membrane protein, putative insig. 27 97
o Pseudomonas fluorescens SBW25 PFLU_RS10475 AI-2E family transporter insig. 27 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS10475 AI-2E family transporter sig. 27 91
o Pseudomonas syringae pv. syringae B728a Psyr_3210 Protein of unknown function UPF0118 insig. 28 88
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3210 Protein of unknown function UPF0118 insig. 28 88
o Serratia liquefaciens MT49 IAI46_10470 AI-2E family transporter insig. 31 88
o Pseudomonas sp. RS175 PFR28_02842 Putative transport protein YdiK insig. 28 91
o Pseudomonas fluorescens FW300-N2E3 AO353_19805 hypothetical protein sig. 30 90
o Pseudomonas sp. DMC3 GFF1423 Putative transport protein YdiK cofit 29 88
o Ralstonia sp. UNC404CL21Col ABZR87_RS08310 AI-2E family transporter insig. 30 92
o Variovorax sp. SCN45 GFF1804 Uncharacterized UPF0118 membrane protein insig. 28 90
o Castellaniella sp019104865 MT123 ABCV34_RS06025 AI-2E family transporter cofit 31 94
o Sphingobium sp. HT1-2 GFF4818 Uncharacterized UPF0118 membrane protein cofit 31 84
o Paraburkholderia sabiae LMG 24235 QEN71_RS09300 AI-2E family transporter insig. 29 93
  Sphingobium sp. HT1-2 GFF411 Uncharacterized UPF0118 membrane protein cofit 32 91
  Erwinia amylovora T8 OLJFJH_14610 AI-2E family transporter YdiK insig. 28 91
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS10545 AI-2E family transporter insig. 35 60
  Phocaeicola dorei CL03T12C01 ABI39_RS10530 AI-2E family transporter insig. 35 57
o Dickeya dianthicola ME23 DZA65_RS13330 AI-2E family transporter YdiK strong 28 91
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14815 AI-2E family transporter insig. 34 57
o Dickeya dadantii 3937 DDA3937_RS12800 AI-2E family transporter YdiK strong 28 91
  Bacteroides stercoris CC31F HMPREF1181_RS06430 AI-2E family transporter cofit 33 63
o Escherichia fergusonii Becca EFB2_02304 Putative transport protein YdiK insig. 27 93
o Escherichia coli ECOR38 HEPCGN_05610 ydiK AI-2E family transporter YdiK insig. 27 93
o Escherichia coli ECRC100 OKFHMN_27225 ydiK AI-2E family transporter YdiK insig. 27 93
o Escherichia coli ECRC101 MCAODC_18185 ydiK AI-2E family transporter YdiK insig. 27 93
o Escherichia coli ECRC102 NIAGMN_00840 ydiK AI-2E family transporter YdiK cofit 27 93
o Escherichia coli ECRC98 JDDGAC_01800 ydiK AI-2E family transporter YdiK insig. 27 93
o Escherichia coli ECRC99 KEDOAH_00885 ydiK AI-2E family transporter YdiK no data 27 93
o Escherichia coli Nissle 1917 ECOLIN_RS09435 AI-2E family transporter YdiK no data 27 93
o Escherichia coli BL21 ECD_01657 UPF0118 family inner membrane protein insig. 27 93
o Escherichia coli ECOR27 NOLOHH_17745 ydiK AI-2E family transporter YdiK insig. 27 93
o Escherichia coli ECRC62 BNILDI_16535 ydiK AI-2E family transporter YdiK cofit 27 93
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02036 Putative transport protein YdiK sig. 27 93
o Escherichia coli BW25113 b1688 ydiK predicted inner membrane protein (NCBI) insig. 27 93
o Dickeya dianthicola 67-19 HGI48_RS12865 AI-2E family transporter YdiK sig. 28 91
o Dechlorosoma suillum PS Dsui_0423 putative permease strong 29 97
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS17695 AI-2E family transporter YdiK cofit 27 91
  Pantoea sp. MT58 IAI47_10895 AI-2E family transporter YdiK sig. 27 91
  Bacteroides thetaiotaomicron VPI-5482 BT1471 conserved hypothetical protein (NCBI ptt file) sig. 35 56
  Rahnella sp. WP5 EX31_RS13930 AI-2E family transporter YdiK insig. 27 94
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3553 Putative membrane protein insig. 27 94
  Bacteroides ovatus ATCC 8483 BACOVA_04202 hypothetical protein insig. 32 62
  Enterobacter asburiae PDN3 EX28DRAFT_1697 Predicted permease insig. 26 91
  Enterobacter sp. TBS_079 MPMX20_01925 Putative transport protein YdiK insig. 27 91
  Sinorhizobium meliloti 1021 SMa0447 hypothetical protein insig. 31 89
  Cupriavidus basilensis FW507-4G11 RR42_RS03900 membrane protein insig. 26 91
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_25320 ydiK AI-2E family transporter YdiK cofit 27 91
o Erwinia tracheiphila SCR3 LU632_RS11035 ydiK AI-2E family transporter YdiK insig. 27 91
  Pectobacterium carotovorum WPP14 HER17_RS08900 AI-2E family transporter YdiK insig. 27 91
  Klebsiella michiganensis M5al BWI76_RS17055 hypothetical protein insig. 25 91
o Mycobacterium tuberculosis H37Rv Rv1101c Conserved membrane protein insig. 25 92
  Pseudomonas syringae pv. syringae B728a Psyr_2029 Protein of unknown function UPF0118 sig. 25 91
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2029 Protein of unknown function UPF0118 insig. 25 91
  Serratia liquefaciens MT49 IAI46_11125 AI-2E family transporter YdiK cofit 25 91
o Acinetobacter baumannii LAC-4 RR41_RS01810 AI-2E family transporter insig. 27 91
  Pseudomonas sp. RS175 PFR28_03068 Putative transport protein YdiK insig. 27 91
  Klebsiella pneumoniae MKP103 KDGMDA_24275 AI-2E family transporter YdiK insig. 25 91
  Pseudomonas fluorescens SBW25 PFLU_RS09095 AI-2E family transporter insig. 26 89
  Pseudomonas fluorescens SBW25-INTG PFLU_RS09095 AI-2E family transporter insig. 26 89
  Pseudomonas sp. DMC3 GFF4801 Putative transport protein YdiK cofit 27 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5882 Putative membrane protein strong 26 91
  Pseudomonas fluorescens FW300-N2C3 AO356_19830 hypothetical protein sig. 27 91
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01937 Putative transport protein YdiK cofit 26 89
o Shewanella oneidensis MR-1 SO0472 membrane protein, putative (NCBI ptt file) strong 27 99
o Shewanella sp. ANA-3 Shewana3_0477 hypothetical protein (RefSeq) insig. 26 100